TA15870 | metallo-protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA15870OTHER0.8968590.0024660.100675
No Results

  • Fasta :-

    >TA15870 MGLRNLFHKPLHFEYALLAHSLCKLLRLYALCRQLCLVKKELAGEKKVVTTLAKKDDENY KKTLALLKPYLTSAAYQKTLEYSRDKLRLEMTFELVHLALSVPFCFNNTLLKFWHLSGEL LRHKCHYSQVLVYFALRLGFSFLFRLPFRYYTAYRLEKKHGFKTKSRFVFLKQYLLCYAF YVLLLTGLASGLTWLNKFSKSNFRVNALAFLVFFKTALVFVVPLFLAFEHKLLPLSDPEL RREVDAMGKKLGLTSKNVHVVSANTAPSHGLALHWGFCKFKHAYLNESYVTLGKPSAMAL LSHVFGHFKHHHFFKTFVFDLLKDSLFLFLFDHFKGDTALFKSFNTHSVPALTMKLDTFV AFVCPLYFLCNALKSVYFHYLEFEADRHAVRLGHSDELVNFWTTVYREKKWFFNVDPLYG KLFNFNPLFGAKHGGAPSLFERVYAVYDATVASKPVSN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA15870.fa Sequence name : TA15870 Sequence length : 458 VALUES OF COMPUTED PARAMETERS Coef20 : 3.486 CoefTot : -0.104 ChDiff : 28 ZoneTo : 40 KR : 7 DE : 1 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.994 2.447 0.387 0.823 MesoH : 0.415 1.059 -0.177 0.420 MuHd_075 : 39.386 22.038 10.488 8.315 MuHd_095 : 23.004 21.438 9.435 6.325 MuHd_100 : 23.250 18.831 8.532 6.158 MuHd_105 : 35.526 26.069 11.951 8.822 Hmax_075 : 13.213 12.513 5.326 5.200 Hmax_095 : 6.500 12.900 0.026 4.980 Hmax_100 : 13.100 12.900 4.976 6.380 Hmax_105 : 14.100 18.200 5.718 5.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2174 0.7826 DFMC : 0.3434 0.6566 This protein is probably imported in mitochondria. f(Ser) = 0.0250 f(Arg) = 0.0750 CMi = 0.14286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 458 TA15870 MGLRNLFHKPLHFEYALLAHSLCKLLRLYALCRQLCLVKKELAGEKKVVTTLAKKDDENYKKTLALLKPYLTSAAYQKTL 80 EYSRDKLRLEMTFELVHLALSVPFCFNNTLLKFWHLSGELLRHKCHYSQVLVYFALRLGFSFLFRLPFRYYTAYRLEKKH 160 GFKTKSRFVFLKQYLLCYAFYVLLLTGLASGLTWLNKFSKSNFRVNALAFLVFFKTALVFVVPLFLAFEHKLLPLSDPEL 240 RREVDAMGKKLGLTSKNVHVVSANTAPSHGLALHWGFCKFKHAYLNESYVTLGKPSAMALLSHVFGHFKHHHFFKTFVFD 320 LLKDSLFLFLFDHFKGDTALFKSFNTHSVPALTMKLDTFVAFVCPLYFLCNALKSVYFHYLEFEADRHAVRLGHSDELVN 400 FWTTVYREKKWFFNVDPLYGKLFNFNPLFGAKHGGAPSLFERVYAVYDATVASKPVSN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA15870 4 ---MGLR|NL 0.082 . TA15870 9 LRNLFHK|PL 0.080 . TA15870 24 LAHSLCK|LL 0.059 . TA15870 27 SLCKLLR|LY 0.079 . TA15870 33 RLYALCR|QL 0.086 . TA15870 39 RQLCLVK|KE 0.058 . TA15870 40 QLCLVKK|EL 0.097 . TA15870 46 KELAGEK|KV 0.062 . TA15870 47 ELAGEKK|VV 0.120 . TA15870 54 VVTTLAK|KD 0.058 . TA15870 55 VTTLAKK|DD 0.090 . TA15870 61 KDDENYK|KT 0.062 . TA15870 62 DDENYKK|TL 0.078 . TA15870 68 KTLALLK|PY 0.056 . TA15870 78 TSAAYQK|TL 0.076 . TA15870 84 KTLEYSR|DK 0.088 . TA15870 86 LEYSRDK|LR 0.056 . TA15870 88 YSRDKLR|LE 0.092 . TA15870 112 FNNTLLK|FW 0.069 . TA15870 122 LSGELLR|HK 0.087 . TA15870 124 GELLRHK|CH 0.057 . TA15870 137 LVYFALR|LG 0.070 . TA15870 145 GFSFLFR|LP 0.089 . TA15870 149 LFRLPFR|YY 0.103 . TA15870 155 RYYTAYR|LE 0.080 . TA15870 158 TAYRLEK|KH 0.134 . TA15870 159 AYRLEKK|HG 0.087 . TA15870 163 EKKHGFK|TK 0.063 . TA15870 165 KHGFKTK|SR 0.117 . TA15870 167 GFKTKSR|FV 0.144 . TA15870 172 SRFVFLK|QY 0.067 . TA15870 197 GLTWLNK|FS 0.064 . TA15870 200 WLNKFSK|SN 0.097 . TA15870 204 FSKSNFR|VN 0.076 . TA15870 215 AFLVFFK|TA 0.059 . TA15870 231 FLAFEHK|LL 0.063 . TA15870 241 LSDPELR|RE 0.070 . TA15870 242 SDPELRR|EV 0.248 . TA15870 249 EVDAMGK|KL 0.057 . TA15870 250 VDAMGKK|LG 0.073 . TA15870 256 KLGLTSK|NV 0.079 . TA15870 279 LHWGFCK|FK 0.080 . TA15870 281 WGFCKFK|HA 0.076 . TA15870 294 SYVTLGK|PS 0.062 . TA15870 309 HVFGHFK|HH 0.062 . TA15870 315 KHHHFFK|TF 0.068 . TA15870 323 FVFDLLK|DS 0.053 . TA15870 335 FLFDHFK|GD 0.069 . TA15870 342 GDTALFK|SF 0.072 . TA15870 355 VPALTMK|LD 0.064 . TA15870 374 FLCNALK|SV 0.084 . TA15870 387 LEFEADR|HA 0.093 . TA15870 391 ADRHAVR|LG 0.080 . TA15870 407 FWTTVYR|EK 0.077 . TA15870 409 TTVYREK|KW 0.062 . TA15870 410 TVYREKK|WF 0.318 . TA15870 421 VDPLYGK|LF 0.053 . TA15870 432 NPLFGAK|HG 0.063 . TA15870 442 APSLFER|VY 0.101 . TA15870 454 DATVASK|PV 0.077 . ____________________________^_________________

  • Fasta :-

    >TA15870 ATGGGTTTACGCAACTTGTTCCATAAACCCTTACATTTTGAATATGCTCTTCTGGCTCAT TCGTTGTGTAAACTTTTGAGGCTATATGCACTATGTAGACAGTTGTGTTTAGTTAAGAAG GAATTGGCAGGAGAAAAGAAAGTCGTTACTACTTTAGCGAAAAAGGATGATGAAAATTAC AAAAAAACTCTTGCTCTCCTCAAACCCTACCTAACATCAGCAGCCTATCAGAAAACATTG GAATACTCCAGAGATAAATTGAGACTTGAAATGACCTTTGAATTAGTTCATCTGGCTCTT TCTGTACCGTTCTGTTTTAACAACACTCTTTTGAAATTTTGGCATTTATCAGGTGAACTA TTGCGTCATAAATGTCATTATTCACAGGTTCTTGTTTACTTTGCCCTTAGATTGGGTTTT TCATTCTTGTTCCGTTTACCATTCCGTTACTACACTGCCTACAGATTGGAGAAAAAACAT GGATTTAAAACCAAAAGCAGATTTGTTTTTCTTAAACAATATTTACTATGTTATGCCTTC TATGTTTTACTTCTTACTGGATTGGCTTCTGGTCTCACCTGGCTTAACAAGTTCTCCAAG TCAAACTTCAGAGTCAATGCTCTTGCATTCTTGGTTTTTTTCAAAACTGCTCTGGTATTC GTAGTTCCATTGTTTTTGGCCTTTGAACACAAATTGCTACCATTGAGTGATCCTGAGCTT AGGAGGGAAGTCGATGCAATGGGTAAAAAACTAGGATTGACATCAAAGAATGTCCATGTT GTGTCAGCAAATACTGCACCTTCTCATGGACTCGCTTTACATTGGGGATTTTGTAAGTTT AAGCATGCTTATCTCAATGAATCTTACGTTACCCTTGGAAAACCATCAGCTATGGCATTA CTTTCTCATGTATTTGGTCATTTCAAACATCACCATTTCTTCAAAACATTTGTATTCGAT TTATTAAAAGATTCATTGTTTCTATTTTTGTTTGACCATTTCAAGGGAGATACTGCATTA TTCAAGAGCTTCAATACACATTCTGTACCTGCCCTCACAATGAAACTTGATACGTTCGTT GCATTTGTTTGCCCCTTGTACTTTTTGTGCAATGCTCTGAAATCTGTCTATTTTCATTAC CTTGAATTTGAGGCAGATCGACATGCTGTGAGATTAGGTCACAGTGATGAATTGGTTAAT TTCTGGACTACTGTTTATAGGGAAAAGAAGTGGTTCTTCAATGTAGACCCACTATATGGC AAATTATTTAATTTTAATCCTCTATTTGGTGCAAAACATGGAGGTGCTCCATCACTTTTT GAAAGGGTTTATGCTGTTTATGATGCTACTGTAGCTTCAAAGCCTGTTTCTAATTAA
  • Download Fasta

  • Fasta :-

    MGLRNLFHKPLHFEYALLAHSLCKLLRLYALCRQLCLVKKELAGEKKVVTTLAKKDDENY KKTLALLKPYLTSAAYQKTLEYSRDKLRLEMTFELVHLALSVPFCFNNTLLKFWHLSGEL LRHKCHYSQVLVYFALRLGFSFLFRLPFRYYTAYRLEKKHGFKTKSRFVFLKQYLLCYAF YVLLLTGLASGLTWLNKFSKSNFRVNALAFLVFFKTALVFVVPLFLAFEHKLLPLSDPEL RREVDAMGKKLGLTSKNVHVVSANTAPSHGLALHWGFCKFKHAYLNESYVTLGKPSAMAL LSHVFGHFKHHHFFKTFVFDLLKDSLFLFLFDHFKGDTALFKSFNTHSVPALTMKLDTFV AFVCPLYFLCNALKSVYFHYLEFEADRHAVRLGHSDELVNFWTTVYREKKWFFNVDPLYG KLFNFNPLFGAKHGGAPSLFERVYAVYDATVASKPVSN

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TA15870      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India