TA15895 | metallo-protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA15895OTHER0.9371390.0019190.060942
No Results

  • Fasta :-

    >TA15895 MGLRNLFHKPLHFEYALLAHSLYKLLRLYALCRQLCLVKKELAGEKKVVTTLAKKDDENY KKTLALLKPYLTSAAYQKTLEYSKDKLKFDMTFELVHWLVMFAFMFNNNVLKYWHLSGEL LRHKCHYSQVLVYFALRLGFSFLFRLPFRYYTAYRLEKKHGFKTKSRFVFLKQYLLCYAF YVLLLTGLASGLTWLNKFSKSNFRALAFLVFFKTALVFVVPLFLTLKHKLLPLSDPELRR EVDAMGKKLGLTSKNVHVVSANTAHTHGVSLSWGFCKFKHAYLNESYVTLGKPSAMALLS HVFGHFKHHHFFKSFLFDLTKGTVFLFLFDHFKGDTALFKSFGTHSVSALTMKLETVYMA YLCPLLLLVVVVKSVYSHFLEFEADRHAVRLGHSDELVNFWTTVYREKKWFFNVDPLYGR LFSERPSLFERVYAVYDATVASKPVSN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA15895.fa Sequence name : TA15895 Sequence length : 447 VALUES OF COMPUTED PARAMETERS Coef20 : 3.486 CoefTot : -0.261 ChDiff : 30 ZoneTo : 40 KR : 7 DE : 1 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.994 2.447 0.448 0.823 MesoH : 0.437 1.002 -0.193 0.408 MuHd_075 : 39.386 22.868 10.778 8.315 MuHd_095 : 23.112 21.438 9.435 6.325 MuHd_100 : 24.797 19.186 10.310 6.170 MuHd_105 : 37.552 28.939 13.072 8.844 Hmax_075 : 13.213 18.700 5.326 5.200 Hmax_095 : 13.900 12.900 0.026 4.980 Hmax_100 : 13.100 19.500 4.976 6.380 Hmax_105 : 14.100 18.200 5.718 5.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1773 0.8227 DFMC : 0.2656 0.7344 This protein is probably imported in mitochondria. f(Ser) = 0.0250 f(Arg) = 0.0750 CMi = 0.14286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 447 TA15895 MGLRNLFHKPLHFEYALLAHSLYKLLRLYALCRQLCLVKKELAGEKKVVTTLAKKDDENYKKTLALLKPYLTSAAYQKTL 80 EYSKDKLKFDMTFELVHWLVMFAFMFNNNVLKYWHLSGELLRHKCHYSQVLVYFALRLGFSFLFRLPFRYYTAYRLEKKH 160 GFKTKSRFVFLKQYLLCYAFYVLLLTGLASGLTWLNKFSKSNFRALAFLVFFKTALVFVVPLFLTLKHKLLPLSDPELRR 240 EVDAMGKKLGLTSKNVHVVSANTAHTHGVSLSWGFCKFKHAYLNESYVTLGKPSAMALLSHVFGHFKHHHFFKSFLFDLT 320 KGTVFLFLFDHFKGDTALFKSFGTHSVSALTMKLETVYMAYLCPLLLLVVVVKSVYSHFLEFEADRHAVRLGHSDELVNF 400 WTTVYREKKWFFNVDPLYGRLFSERPSLFERVYAVYDATVASKPVSN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA15895 4 ---MGLR|NL 0.082 . TA15895 9 LRNLFHK|PL 0.080 . TA15895 24 LAHSLYK|LL 0.059 . TA15895 27 SLYKLLR|LY 0.080 . TA15895 33 RLYALCR|QL 0.086 . TA15895 39 RQLCLVK|KE 0.058 . TA15895 40 QLCLVKK|EL 0.097 . TA15895 46 KELAGEK|KV 0.062 . TA15895 47 ELAGEKK|VV 0.120 . TA15895 54 VVTTLAK|KD 0.058 . TA15895 55 VTTLAKK|DD 0.090 . TA15895 61 KDDENYK|KT 0.062 . TA15895 62 DDENYKK|TL 0.078 . TA15895 68 KTLALLK|PY 0.056 . TA15895 78 TSAAYQK|TL 0.072 . TA15895 84 KTLEYSK|DK 0.062 . TA15895 86 LEYSKDK|LK 0.069 . TA15895 88 YSKDKLK|FD 0.070 . TA15895 112 FNNNVLK|YW 0.079 . TA15895 122 LSGELLR|HK 0.088 . TA15895 124 GELLRHK|CH 0.057 . TA15895 137 LVYFALR|LG 0.070 . TA15895 145 GFSFLFR|LP 0.089 . TA15895 149 LFRLPFR|YY 0.103 . TA15895 155 RYYTAYR|LE 0.080 . TA15895 158 TAYRLEK|KH 0.134 . TA15895 159 AYRLEKK|HG 0.087 . TA15895 163 EKKHGFK|TK 0.063 . TA15895 165 KHGFKTK|SR 0.117 . TA15895 167 GFKTKSR|FV 0.144 . TA15895 172 SRFVFLK|QY 0.067 . TA15895 197 GLTWLNK|FS 0.066 . TA15895 200 WLNKFSK|SN 0.104 . TA15895 204 FSKSNFR|AL 0.081 . TA15895 213 AFLVFFK|TA 0.059 . TA15895 227 PLFLTLK|HK 0.053 . TA15895 229 FLTLKHK|LL 0.060 . TA15895 239 LSDPELR|RE 0.070 . TA15895 240 SDPELRR|EV 0.248 . TA15895 247 EVDAMGK|KL 0.057 . TA15895 248 VDAMGKK|LG 0.073 . TA15895 254 KLGLTSK|NV 0.079 . TA15895 277 LSWGFCK|FK 0.090 . TA15895 279 WGFCKFK|HA 0.075 . TA15895 292 SYVTLGK|PS 0.062 . TA15895 307 HVFGHFK|HH 0.062 . TA15895 313 KHHHFFK|SF 0.096 . TA15895 321 FLFDLTK|GT 0.057 . TA15895 333 FLFDHFK|GD 0.070 . TA15895 340 GDTALFK|SF 0.088 . TA15895 353 VSALTMK|LE 0.063 . TA15895 373 LLVVVVK|SV 0.107 . TA15895 386 LEFEADR|HA 0.092 . TA15895 390 ADRHAVR|LG 0.080 . TA15895 406 FWTTVYR|EK 0.077 . TA15895 408 TTVYREK|KW 0.062 . TA15895 409 TVYREKK|WF 0.318 . TA15895 420 VDPLYGR|LF 0.072 . TA15895 425 GRLFSER|PS 0.085 . TA15895 431 RPSLFER|VY 0.102 . TA15895 443 DATVASK|PV 0.077 . ____________________________^_________________

  • Fasta :-

    >TA15895 ATGGGTTTACGTAACTTGTTCCATAAACCCTTACATTTTGAATATGCTCTTCTGGCTCAT TCGTTATATAAACTTTTGAGGCTATATGCACTATGTAGACAGTTGTGTTTAGTTAAGAAG GAATTGGCAGGAGAAAAGAAAGTCGTTACTACTTTAGCGAAAAAGGATGATGAAAATTAC AAAAAAACTCTTGCTCTCCTCAAACCCTACCTAACATCAGCAGCCTATCAGAAAACATTG GAATACTCCAAAGATAAACTGAAATTCGACATGACCTTTGAATTAGTTCACTGGCTTGTA ATGTTTGCATTTATGTTTAACAACAATGTTTTGAAATATTGGCATTTATCAGGTGAACTA TTGCGTCATAAATGTCATTATTCACAGGTTCTTGTTTACTTTGCCCTTAGATTGGGTTTT TCATTCTTGTTCCGTTTACCATTTCGTTACTACACTGCCTACAGATTGGAGAAAAAACAT GGATTTAAAACCAAAAGCAGATTTGTTTTTCTTAAACAATATTTACTATGTTATGCCTTC TATGTTCTACTTCTTACTGGATTGGCTTCTGGTCTCACCTGGCTTAACAAGTTCTCCAAG TCAAACTTCAGAGCTCTTGCATTCTTGGTTTTTTTCAAAACTGCTCTGGTATTCGTAGTC CCATTGTTTTTGACCCTCAAACACAAATTGTTACCATTGAGTGATCCTGAGCTTAGGAGG GAAGTCGATGCAATGGGTAAAAAACTAGGATTGACATCAAAGAATGTCCATGTTGTGTCA GCAAATACTGCACACACCCACGGCGTTAGTCTGTCTTGGGGATTTTGTAAGTTTAAGCAT GCTTATCTCAATGAATCTTACGTTACCCTTGGAAAACCATCAGCTATGGCATTACTTTCT CACGTATTTGGTCATTTCAAACATCACCATTTCTTCAAATCATTTCTATTTGATTTAACA AAGGGGACAGTTTTCCTATTTTTGTTTGACCACTTCAAGGGAGATACAGCATTGTTCAAA AGCTTCGGTACACATTCTGTATCTGCCCTCACAATGAAACTTGAAACCGTCTATATGGCA TATTTATGCCCCCTTCTACTTTTGGTAGTTGTAGTCAAGTCGGTTTATTCACATTTCCTT GAATTTGAGGCAGATCGACATGCTGTGAGATTAGGTCACAGTGATGAATTGGTTAATTTC TGGACTACTGTTTATAGGGAAAAGAAGTGGTTCTTCAATGTAGACCCACTATATGGCCGT TTGTTCAGTGAAAGACCGTCACTTTTTGAAAGGGTTTATGCTGTTTATGATGCTACTGTA GCTTCAAAGCCTGTTTCTAATTAA
  • Download Fasta

  • Fasta :-

    MGLRNLFHKPLHFEYALLAHSLYKLLRLYALCRQLCLVKKELAGEKKVVTTLAKKDDENY KKTLALLKPYLTSAAYQKTLEYSKDKLKFDMTFELVHWLVMFAFMFNNNVLKYWHLSGEL LRHKCHYSQVLVYFALRLGFSFLFRLPFRYYTAYRLEKKHGFKTKSRFVFLKQYLLCYAF YVLLLTGLASGLTWLNKFSKSNFRALAFLVFFKTALVFVVPLFLTLKHKLLPLSDPELRR EVDAMGKKLGLTSKNVHVVSANTAHTHGVSLSWGFCKFKHAYLNESYVTLGKPSAMALLS HVFGHFKHHHFFKSFLFDLTKGTVFLFLFDHFKGDTALFKSFGTHSVSALTMKLETVYMA YLCPLLLLVVVVKSVYSHFLEFEADRHAVRLGHSDELVNFWTTVYREKKWFFNVDPLYGR LFSERPSLFERVYAVYDATVASKPVSN

    No Results
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IDSitePeptideScoreMethod
TA15895427 SSERPSLFER0.993unsp

TA15895      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India