TA16115 | mitochondrial membrane protease, subunit 2, putative

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_IDPredictionOTHERSPmTPCS_Position
TA16115OTHER0.7175070.0957880.186705
No Results

  • Fasta :-

    >TA16115 MFFGKFKRIKSFSKSLVYTIGTFHILTYYLVDATLTKGPSMSPEISDSGTLVLYMRPYLI SKLREGQELYRKNDVVISTSPLNPNKRICKRIVGVPYETIHNITIPQGHFWLQGDNRENS LDSRHYGAISSGLFQGIVFLIASKENGVKLI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA16115.fa Sequence name : TA16115 Sequence length : 151 VALUES OF COMPUTED PARAMETERS Coef20 : 4.484 CoefTot : -0.825 ChDiff : 8 ZoneTo : 31 KR : 5 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.694 1.612 0.269 0.684 MesoH : -0.703 0.079 -0.418 0.132 MuHd_075 : 26.825 25.650 8.966 6.316 MuHd_095 : 25.740 24.922 9.256 7.289 MuHd_100 : 33.990 28.544 10.155 8.979 MuHd_105 : 36.066 25.956 10.898 8.683 Hmax_075 : 17.100 24.200 3.656 6.500 Hmax_095 : 16.900 18.600 3.754 6.500 Hmax_100 : 20.700 21.800 4.021 7.320 Hmax_105 : 19.400 17.238 3.255 6.361 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2005 0.7995 DFMC : 0.2754 0.7246 This protein is probably imported in mitochondria. f(Ser) = 0.0968 f(Arg) = 0.0323 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 151 TA16115 MFFGKFKRIKSFSKSLVYTIGTFHILTYYLVDATLTKGPSMSPEISDSGTLVLYMRPYLISKLREGQELYRKNDVVISTS 80 PLNPNKRICKRIVGVPYETIHNITIPQGHFWLQGDNRENSLDSRHYGAISSGLFQGIVFLIASKENGVKLI 160 ................................................................................ 80 ....................................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA16115 5 --MFFGK|FK 0.072 . TA16115 7 MFFGKFK|RI 0.061 . TA16115 8 FFGKFKR|IK 0.189 . TA16115 10 GKFKRIK|SF 0.125 . TA16115 14 RIKSFSK|SL 0.085 . TA16115 37 VDATLTK|GP 0.066 . TA16115 56 TLVLYMR|PY 0.077 . TA16115 62 RPYLISK|LR 0.063 . TA16115 64 YLISKLR|EG 0.073 . TA16115 71 EGQELYR|KN 0.092 . TA16115 72 GQELYRK|ND 0.064 . TA16115 86 SPLNPNK|RI 0.069 . TA16115 87 PLNPNKR|IC 0.190 . TA16115 90 PNKRICK|RI 0.117 . TA16115 91 NKRICKR|IV 0.353 . TA16115 117 WLQGDNR|EN 0.081 . TA16115 124 ENSLDSR|HY 0.129 . TA16115 144 VFLIASK|EN 0.061 . TA16115 149 SKENGVK|LI 0.066 . ____________________________^_________________

  • Fasta :-

    >TA16115 ATGTTTTTTGGTAAATTTAAAAGGATTAAATCCTTTTCTAAGTCTCTTGTCTACACAATC GGTACCTTCCACATCCTAACATATTATCTCGTCGACGCCACTCTGACCAAGGGGCCTAGT ATGAGTCCTGAGATAAGTGACTCTGGTACGTTGGTATTGTACATGCGTCCGTATTTGATT TCAAAGCTCCGAGAAGGGCAGGAATTATATCGCAAAAACGACGTTGTGATTAGCACATCG CCTCTGAACCCAAACAAGAGAATTTGTAAACGAATTGTCGGTGTTCCCTACGAGACTATA CACAACATTACTATACCTCAGGGTCATTTTTGGTTACAAGGCGATAATAGAGAAAACTCA CTTGACAGTCGTCACTATGGTGCGATATCTTCTGGACTATTTCAAGGGATTGTATTTTTA ATAGCTTCAAAGGAGAACGGAGTCAAGTTGATTTAG
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  • Fasta :-

    MFFGKFKRIKSFSKSLVYTIGTFHILTYYLVDATLTKGPSMSPEISDSGTLVLYMRPYLI SKLREGQELYRKNDVVISTSPLNPNKRICKRIVGVPYETIHNITIPQGHFWLQGDNRENS LDSRHYGAISSGLFQGIVFLIASKENGVKLI

  • title: Catalytic site
  • coordinates: S40,K90
No Results
No Results
IDSitePeptideScoreMethod
TA1611542 SGPSMSPEIS0.994unsp

TA16115      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India