TA17685 | aspartyl(acid) protease, putative

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_IDPredictionOTHERSPmTPCS_Position
TA17685SP0.1947650.7795910.025643CS pos: 26-27. SHL-GL. Pr: 0.6591
No Results

  • Fasta :-

    >TA17685 MLLNKFLYISYIFILLMIQFPKLSHLGLKFSKCARSNSPSKNLVARKKSDIKFGSRDKDN NGFVKGTVKVRIYGSLHKFAFYYIYMGIGNPKVKQMLIIDTGSQQINVACGNSPSCGKHS LDNYNYQNSVTYKPIDCESDSCKIIEGGCDLERSCIFSETYSEGSNVKGMYIGDLVSFDT DEDSSDLSSFFDYIGCVTHESAMIRSQITNGILGLSRSDKNPLIKNEYYESQSFIEKYLT DHFSPRHKIFSLCLSEDGGVLTLGGYDKDLDMLVKKKSDMIWTPMVKSEFYIVRVFRFTI DDDVTDVNRKNFVLDTGTTLSTFEKELFIKIEKPIKEACYQNKKFSKIKKTNIECKVDEV NGKICFSDITKLPIITINFENGTNFDWKPESYMIDRTVKRTINDYSWWCLGIEESKTNEN IFGANFFKNNHVVFNLDKELIGISHGNCPDNGFPNKP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA17685.fa Sequence name : TA17685 Sequence length : 457 VALUES OF COMPUTED PARAMETERS Coef20 : 4.511 CoefTot : -0.223 ChDiff : 2 ZoneTo : 49 KR : 9 DE : 0 CleavSite : 48 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.982 0.124 0.718 MesoH : -0.831 0.018 -0.396 0.121 MuHd_075 : 41.292 25.346 12.611 9.235 MuHd_095 : 23.696 16.396 7.538 5.391 MuHd_100 : 32.071 20.177 9.886 7.293 MuHd_105 : 45.862 25.642 14.102 9.722 Hmax_075 : 12.950 11.900 3.322 4.620 Hmax_095 : -2.100 21.262 1.003 4.140 Hmax_100 : 14.000 11.100 2.092 4.920 Hmax_105 : 17.600 17.100 4.333 5.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1911 0.8089 DFMC : 0.1866 0.8134 This protein is probably imported in chloroplast. f(Ser) = 0.1429 f(Arg) = 0.0408 CMi = 1.12360 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 457 TA17685 MLLNKFLYISYIFILLMIQFPKLSHLGLKFSKCARSNSPSKNLVARKKSDIKFGSRDKDNNGFVKGTVKVRIYGSLHKFA 80 FYYIYMGIGNPKVKQMLIIDTGSQQINVACGNSPSCGKHSLDNYNYQNSVTYKPIDCESDSCKIIEGGCDLERSCIFSET 160 YSEGSNVKGMYIGDLVSFDTDEDSSDLSSFFDYIGCVTHESAMIRSQITNGILGLSRSDKNPLIKNEYYESQSFIEKYLT 240 DHFSPRHKIFSLCLSEDGGVLTLGGYDKDLDMLVKKKSDMIWTPMVKSEFYIVRVFRFTIDDDVTDVNRKNFVLDTGTTL 320 STFEKELFIKIEKPIKEACYQNKKFSKIKKTNIECKVDEVNGKICFSDITKLPIITINFENGTNFDWKPESYMIDRTVKR 400 TINDYSWWCLGIEESKTNENIFGANFFKNNHVVFNLDKELIGISHGNCPDNGFPNKP 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA17685 5 --MLLNK|FL 0.063 . TA17685 22 LMIQFPK|LS 0.068 . TA17685 29 LSHLGLK|FS 0.069 . TA17685 32 LGLKFSK|CA 0.068 . TA17685 35 KFSKCAR|SN 0.250 . TA17685 41 RSNSPSK|NL 0.064 . TA17685 46 SKNLVAR|KK 0.181 . TA17685 47 KNLVARK|KS 0.098 . TA17685 48 NLVARKK|SD 0.146 . TA17685 52 RKKSDIK|FG 0.065 . TA17685 56 DIKFGSR|DK 0.097 . TA17685 58 KFGSRDK|DN 0.065 . TA17685 65 DNNGFVK|GT 0.080 . TA17685 69 FVKGTVK|VR 0.054 . TA17685 71 KGTVKVR|IY 0.093 . TA17685 78 IYGSLHK|FA 0.074 . TA17685 92 MGIGNPK|VK 0.059 . TA17685 94 IGNPKVK|QM 0.074 . TA17685 118 NSPSCGK|HS 0.060 . TA17685 133 QNSVTYK|PI 0.093 . TA17685 143 CESDSCK|II 0.097 . TA17685 153 GGCDLER|SC 0.116 . TA17685 168 SEGSNVK|GM 0.066 . TA17685 205 HESAMIR|SQ 0.158 . TA17685 217 GILGLSR|SD 0.079 . TA17685 220 GLSRSDK|NP 0.143 . TA17685 225 DKNPLIK|NE 0.061 . TA17685 237 SQSFIEK|YL 0.078 . TA17685 246 TDHFSPR|HK 0.135 . TA17685 248 HFSPRHK|IF 0.072 . TA17685 268 TLGGYDK|DL 0.076 . TA17685 275 DLDMLVK|KK 0.069 . TA17685 276 LDMLVKK|KS 0.117 . TA17685 277 DMLVKKK|SD 0.155 . TA17685 287 IWTPMVK|SE 0.070 . TA17685 294 SEFYIVR|VF 0.082 . TA17685 297 YIVRVFR|FT 0.338 . TA17685 309 DVTDVNR|KN 0.074 . TA17685 310 VTDVNRK|NF 0.062 . TA17685 325 TLSTFEK|EL 0.080 . TA17685 330 EKELFIK|IE 0.061 . TA17685 333 LFIKIEK|PI 0.058 . TA17685 336 KIEKPIK|EA 0.068 . TA17685 343 EACYQNK|KF 0.085 . TA17685 344 ACYQNKK|FS 0.091 . TA17685 347 QNKKFSK|IK 0.071 . TA17685 349 KKFSKIK|KT 0.069 . TA17685 350 KFSKIKK|TN 0.123 . TA17685 356 KTNIECK|VD 0.071 . TA17685 363 VDEVNGK|IC 0.061 . TA17685 371 CFSDITK|LP 0.059 . TA17685 388 GTNFDWK|PE 0.083 . TA17685 396 ESYMIDR|TV 0.106 . TA17685 399 MIDRTVK|RT 0.098 . TA17685 400 IDRTVKR|TI 0.217 . TA17685 416 LGIEESK|TN 0.063 . TA17685 428 FGANFFK|NN 0.073 . TA17685 438 VVFNLDK|EL 0.061 . TA17685 456 DNGFPNK|P- 0.070 . ____________________________^_________________

  • Fasta :-

    >TA17685 ATGTTATTAAATAAATTTTTGTATATTTCTTATATTTTCATCTTATTGATGATACAATTT CCAAAACTTAGTCATTTAGGATTAAAATTCTCAAAATGTGCTCGTTCCAACTCACCTAGT AAGAACCTTGTTGCTAGAAAAAAATCCGACATTAAGTTTGGTAGTAGGGACAAGGACAAT AATGGGTTTGTAAAAGGAACAGTAAAGGTCCGTATATACGGCAGTCTTCACAAATTTGCA TTTTATTACATTTATATGGGAATTGGAAATCCAAAAGTTAAACAAATGTTGATTATTGAT ACCGGATCACAACAGATAAACGTAGCATGTGGAAATAGCCCATCCTGTGGAAAACACTCA TTAGATAACTACAATTACCAAAATTCAGTAACGTACAAGCCCATTGATTGTGAAAGTGAT TCATGTAAAATAATAGAGGGTGGCTGTGATTTAGAAAGATCTTGTATTTTTAGTGAAACA TATTCTGAAGGTAGCAATGTAAAGGGTATGTACATAGGTGATTTGGTAAGTTTCGACACT GATGAAGATTCGTCTGACTTATCTTCTTTTTTTGACTACATTGGTTGCGTCACACACGAG AGTGCAATGATTAGGAGTCAGATAACGAACGGCATTTTGGGTCTTTCCAGAAGCGATAAG AACCCTTTAATTAAAAATGAGTATTACGAATCTCAAAGTTTCATTGAGAAATACCTCACT GATCACTTCAGTCCAAGGCACAAGATATTTTCTCTATGTTTATCTGAAGATGGTGGAGTT TTGACTTTGGGAGGTTATGACAAGGATTTGGATATGCTTGTTAAGAAAAAGTCCGACATG ATATGGACTCCTATGGTGAAATCTGAGTTTTATATTGTTAGGGTTTTCAGATTTACAATC GACGACGATGTTACTGATGTAAATCGAAAGAATTTTGTTCTTGACACTGGTACTACTTTG AGTACCTTTGAGAAGGAGCTGTTTATTAAGATTGAGAAACCAATAAAAGAAGCTTGTTAT CAGAACAAAAAGTTTTCTAAAATTAAGAAGACAAATATTGAGTGCAAAGTTGATGAGGTT AATGGGAAAATTTGTTTCAGCGACATTACTAAACTACCTATAATCACCATTAATTTTGAA AATGGTACTAATTTTGACTGGAAACCTGAATCTTACATGATTGATCGAACCGTGAAGCGA ACTATTAACGATTATTCTTGGTGGTGTTTGGGCATTGAGGAAAGCAAAACTAACGAGAAC ATCTTTGGCGCCAATTTTTTCAAAAACAACCATGTAGTCTTTAACTTGGACAAGGAACTA ATAGGTATTTCTCATGGCAATTGCCCCGATAACGGGTTTCCAAACAAACCATAA
  • Download Fasta

  • Fasta :-

    MLLNKFLYISYIFILLMIQFPKLSHLGLKFSKCARSNSPSKNLVARKKSDIKFGSRDKDN NGFVKGTVKVRIYGSLHKFAFYYIYMGIGNPKVKQMLIIDTGSQQINVACGNSPSCGKHS LDNYNYQNSVTYKPIDCESDSCKIIEGGCDLERSCIFSETYSEGSNVKGMYIGDLVSFDT DEDSSDLSSFFDYIGCVTHESAMIRSQITNGILGLSRSDKNPLIKNEYYESQSFIEKYLT DHFSPRHKIFSLCLSEDGGVLTLGGYDKDLDMLVKKKSDMIWTPMVKSEFYIVRVFRFTI DDDVTDVNRKNFVLDTGTTLSTFEKELFIKIEKPIKEACYQNKKFSKIKKTNIECKVDEV NGKICFSDITKLPIITINFENGTNFDWKPESYMIDRTVKRTINDYSWWCLGIEESKTNEN IFGANFFKNNHVVFNLDKELIGISHGNCPDNGFPNKP

  • title: catalytic residue
  • coordinates: D100,D315
No Results
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No Results

TA17685      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India