TA18155 | protease, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TA18155SP0.4350280.4926630.072309CS pos: 26-27. CVT-IQ. Pr: 0.4948
No Results

  • Fasta :-

    >TA18155 MNKYGRWLKFVFISVFYWIHLQQCVTIQINILNHNTIPINKTIIPFTNNSIPFTSINSIS SKFGSIPSSSINSVSSKFGSVPSSSINSIPFTNINHVPYKFGRLGFINTNVLKFTKFNTN YNLTECKLVKDKSITHLDKQQTPLPNELKKQSLTTNLSLYVSKFLKNVKESNPYKYLTVK LSKFCVMIFGSALHTLVLSKCRFVLPYQLIPFNSGLGTEVTLDTLISIPILYYILKDYTF TQSTLETNNLKPKLEDNNLKSKLEDNKLTNKSKMVNINQTSLDEKYFQLPVRSKFKISMV VTSLLGSFIVSSYFSQFIDSLLLLVSAFDFPISVGMLKSFSVMSSHLFWVFIGSLILKSC MFPIFSKSNPWYKLDLSKLWVHQVLMGYYSSYTIYKLADIGYYLFLKFFDIQNQVSLTDE QISNICETNETIPILITSIGPCLTAPWWEELLYRVFTFKLFNSFLPTLYSSIASSIIFSI NHLSPHSFLQLFSLGLLWSFIQLNNDNILITILIHSLWNSRIFFGSLTGI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA18155.fa Sequence name : TA18155 Sequence length : 530 VALUES OF COMPUTED PARAMETERS Coef20 : 4.180 CoefTot : -4.995 ChDiff : 19 ZoneTo : 124 KR : 10 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.988 2.006 0.295 0.712 MesoH : 1.199 1.327 0.051 0.517 MuHd_075 : 27.827 22.136 8.195 7.298 MuHd_095 : 29.188 22.993 8.598 8.164 MuHd_100 : 31.440 20.776 8.612 7.526 MuHd_105 : 34.834 23.284 10.166 7.210 Hmax_075 : 19.483 21.900 3.998 7.580 Hmax_095 : 17.800 18.100 3.504 5.840 Hmax_100 : 16.500 17.800 3.237 6.970 Hmax_105 : 12.300 20.100 1.721 6.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0762 0.9238 DFMC : 0.0185 0.9815 This protein is probably imported in chloroplast. f(Ser) = 0.1452 f(Arg) = 0.0161 CMi = 1.56794 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 530 TA18155 MNKYGRWLKFVFISVFYWIHLQQCVTIQINILNHNTIPINKTIIPFTNNSIPFTSINSISSKFGSIPSSSINSVSSKFGS 80 VPSSSINSIPFTNINHVPYKFGRLGFINTNVLKFTKFNTNYNLTECKLVKDKSITHLDKQQTPLPNELKKQSLTTNLSLY 160 VSKFLKNVKESNPYKYLTVKLSKFCVMIFGSALHTLVLSKCRFVLPYQLIPFNSGLGTEVTLDTLISIPILYYILKDYTF 240 TQSTLETNNLKPKLEDNNLKSKLEDNKLTNKSKMVNINQTSLDEKYFQLPVRSKFKISMVVTSLLGSFIVSSYFSQFIDS 320 LLLLVSAFDFPISVGMLKSFSVMSSHLFWVFIGSLILKSCMFPIFSKSNPWYKLDLSKLWVHQVLMGYYSSYTIYKLADI 400 GYYLFLKFFDIQNQVSLTDEQISNICETNETIPILITSIGPCLTAPWWEELLYRVFTFKLFNSFLPTLYSSIASSIIFSI 480 NHLSPHSFLQLFSLGLLWSFIQLNNDNILITILIHSLWNSRIFFGSLTGI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA18155 3 ----MNK|YG 0.062 . TA18155 6 -MNKYGR|WL 0.109 . TA18155 9 KYGRWLK|FV 0.228 . TA18155 41 NTIPINK|TI 0.062 . TA18155 62 INSISSK|FG 0.078 . TA18155 77 INSVSSK|FG 0.080 . TA18155 100 INHVPYK|FG 0.079 . TA18155 103 VPYKFGR|LG 0.096 . TA18155 113 INTNVLK|FT 0.062 . TA18155 116 NVLKFTK|FN 0.066 . TA18155 127 YNLTECK|LV 0.068 . TA18155 130 TECKLVK|DK 0.077 . TA18155 132 CKLVKDK|SI 0.089 . TA18155 139 SITHLDK|QQ 0.062 . TA18155 149 PLPNELK|KQ 0.056 . TA18155 150 LPNELKK|QS 0.116 . TA18155 163 LSLYVSK|FL 0.072 . TA18155 166 YVSKFLK|NV 0.087 . TA18155 169 KFLKNVK|ES 0.057 . TA18155 175 KESNPYK|YL 0.090 . TA18155 180 YKYLTVK|LS 0.060 . TA18155 183 LTVKLSK|FC 0.066 . TA18155 200 HTLVLSK|CR 0.059 . TA18155 202 LVLSKCR|FV 0.120 . TA18155 236 ILYYILK|DY 0.073 . TA18155 251 LETNNLK|PK 0.054 . TA18155 253 TNNLKPK|LE 0.079 . TA18155 260 LEDNNLK|SK 0.066 . TA18155 262 DNNLKSK|LE 0.069 . TA18155 267 SKLEDNK|LT 0.063 . TA18155 271 DNKLTNK|SK 0.075 . TA18155 273 KLTNKSK|MV 0.097 . TA18155 285 QTSLDEK|YF 0.066 . TA18155 292 YFQLPVR|SK 0.131 . TA18155 294 QLPVRSK|FK 0.068 . TA18155 296 PVRSKFK|IS 0.067 . TA18155 338 ISVGMLK|SF 0.080 . TA18155 358 IGSLILK|SC 0.076 . TA18155 367 MFPIFSK|SN 0.069 . TA18155 373 KSNPWYK|LD 0.067 . TA18155 378 YKLDLSK|LW 0.062 . TA18155 396 SSYTIYK|LA 0.077 . TA18155 407 GYYLFLK|FF 0.068 . TA18155 454 WEELLYR|VF 0.091 . TA18155 459 YRVFTFK|LF 0.071 . TA18155 521 HSLWNSR|IF 0.090 . ____________________________^_________________

  • Fasta :-

    >TA18155 ATGAATAAATATGGAAGATGGTTGAAATTTGTTTTTATATCAGTTTTTTATTGGATACAC TTACAACAGTGTGTGACTATACAAATCAATATACTCAATCATAATACTATTCCCATTAAT AAAACAATTATACCATTTACTAACAATAGTATACCATTTACTAGTATCAATAGTATATCT TCTAAGTTTGGAAGTATACCATCCTCGAGTATCAATAGTGTATCTTCTAAGTTTGGAAGT GTACCATCCTCTAGTATCAATAGTATACCATTTACTAATATAAATCATGTACCTTATAAG TTTGGAAGATTAGGATTTATTAATACTAATGTTTTAAAATTTACAAAATTTAATACTAAT TACAATTTAACTGAATGTAAATTAGTTAAAGATAAATCAATTACACATTTGGATAAACAA CAAACTCCGTTACCGAATGAATTAAAAAAACAATCATTAACTACAAACTTAAGTTTATAT GTAAGTAAATTTCTGAAAAATGTTAAAGAATCAAATCCATACAAATATTTAACAGTTAAA TTATCAAAATTTTGTGTTATGATTTTTGGTTCAGCATTACATACACTTGTATTAAGTAAG TGTAGATTTGTATTACCATATCAATTAATTCCATTTAATTCTGGTCTTGGTACTGAAGTT ACACTTGATACTCTTATTTCTATACCAATTCTATACTATATATTAAAAGATTATACCTTT ACACAATCAACTTTAGAAACTAATAATTTAAAACCAAAGTTAGAAGATAATAATTTAAAA TCAAAGTTAGAAGATAATAAATTAACAAATAAATCGAAAATGGTAAACATTAACCAAACA AGTTTGGATGAAAAATATTTTCAATTACCTGTTAGATCAAAATTTAAAATTTCAATGGTA GTTACATCACTATTAGGTTCATTTATTGTTTCTTCATATTTTTCACAATTTATTGATAGT TTATTATTATTAGTTTCAGCATTTGATTTTCCAATATCTGTTGGTATGTTGAAATCATTT TCAGTAATGTCAAGTCATTTGTTTTGGGTTTTTATAGGCTCATTAATATTGAAATCTTGT ATGTTTCCAATATTTTCCAAATCTAATCCTTGGTATAAATTAGATTTGAGTAAATTATGG GTCCATCAAGTACTCATGGGTTATTATTCCTCATATACTATATATAAACTTGCAGATATA GGCTATTATCTATTTCTTAAATTTTTTGATATACAAAATCAAGTTAGTCTGACTGATGAA CAGATTTCTAATATTTGTGAAACTAATGAAACTATACCAATTTTAATAACTTCTATAGGA CCATGTCTTACAGCACCTTGGTGGGAAGAATTATTATATCGTGTTTTTACATTTAAATTA TTTAATTCATTTTTACCTACTCTCTATTCTTCTATCGCATCATCTATCATCTTTTCAATT AATCATCTTAGTCCTCATTCATTTCTACAACTTTTCTCACTTGGTCTTTTATGGTCTTTT ATTCAATTAAATAATGATAATATATTAATCACTATTCTAATACATTCATTATGGAATTCT AGAATCTTTTTTGGTTCACTTACTGGTATATAA
  • Download Fasta

  • Fasta :-

    MNKYGRWLKFVFISVFYWIHLQQCVTIQINILNHNTIPINKTIIPFTNNSIPFTSINSIS SKFGSIPSSSINSVSSKFGSVPSSSINSIPFTNINHVPYKFGRLGFINTNVLKFTKFNTN YNLTECKLVKDKSITHLDKQQTPLPNELKKQSLTTNLSLYVSKFLKNVKESNPYKYLTVK LSKFCVMIFGSALHTLVLSKCRFVLPYQLIPFNSGLGTEVTLDTLISIPILYYILKDYTF TQSTLETNNLKPKLEDNNLKSKLEDNKLTNKSKMVNINQTSLDEKYFQLPVRSKFKISMV VTSLLGSFIVSSYFSQFIDSLLLLVSAFDFPISVGMLKSFSVMSSHLFWVFIGSLILKSC MFPIFSKSNPWYKLDLSKLWVHQVLMGYYSSYTIYKLADIGYYLFLKFFDIQNQVSLTDE QISNICETNETIPILITSIGPCLTAPWWEELLYRVFTFKLFNSFLPTLYSSIASSIIFSI NHLSPHSFLQLFSLGLLWSFIQLNNDNILITILIHSLWNSRIFFGSLTGI

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TA18155      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India