TA18300 | signal peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006465      

  • Computed_GO_Processes:  signal peptide processing      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA18300OTHER0.9841890.0157050.000106
No Results

  • Fasta :-

    >TA18300 MDCIKSEFYKTRNEFRIFKKRPLESLEYILSMSSMIFVALMCWKFAILLTGTDSPVVVVL SGSMEPAFYRGDILFLMKRNEINSGDIVVFKLEGREIPIVHRAITLHESKDNLYVLSKGD NNRVHDRGLYPGNKNWLNNKDLIGTVLLKVPKVGILSIYLNEIPALKHVIVCFVVLLMLS GKG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA18300.fa Sequence name : TA18300 Sequence length : 183 VALUES OF COMPUTED PARAMETERS Coef20 : 4.012 CoefTot : 0.000 ChDiff : 6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.876 2.429 0.254 0.739 MesoH : -0.031 0.824 -0.214 0.338 MuHd_075 : 21.602 13.183 5.974 6.063 MuHd_095 : 22.831 13.654 7.094 4.578 MuHd_100 : 32.710 19.267 7.895 7.436 MuHd_105 : 32.588 20.061 6.440 8.276 Hmax_075 : 10.100 12.300 2.228 4.970 Hmax_095 : 9.200 11.200 1.533 4.500 Hmax_100 : 10.600 10.600 -0.137 4.850 Hmax_105 : 2.100 6.212 -2.257 3.596 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9769 0.0231 DFMC : 0.9721 0.0279
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 183 TA18300 MDCIKSEFYKTRNEFRIFKKRPLESLEYILSMSSMIFVALMCWKFAILLTGTDSPVVVVLSGSMEPAFYRGDILFLMKRN 80 EINSGDIVVFKLEGREIPIVHRAITLHESKDNLYVLSKGDNNRVHDRGLYPGNKNWLNNKDLIGTVLLKVPKVGILSIYL 160 NEIPALKHVIVCFVVLLMLSGKG 240 ................................................................................ 80 ................................................................................ 160 ....................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA18300 5 --MDCIK|SE 0.072 . TA18300 10 IKSEFYK|TR 0.068 . TA18300 12 SEFYKTR|NE 0.111 . TA18300 16 KTRNEFR|IF 0.090 . TA18300 19 NEFRIFK|KR 0.074 . TA18300 20 EFRIFKK|RP 0.089 . TA18300 21 FRIFKKR|PL 0.278 . TA18300 44 VALMCWK|FA 0.069 . TA18300 70 MEPAFYR|GD 0.082 . TA18300 78 DILFLMK|RN 0.058 . TA18300 79 ILFLMKR|NE 0.130 . TA18300 91 GDIVVFK|LE 0.077 . TA18300 95 VFKLEGR|EI 0.080 . TA18300 102 EIPIVHR|AI 0.084 . TA18300 110 ITLHESK|DN 0.064 . TA18300 118 NLYVLSK|GD 0.062 . TA18300 123 SKGDNNR|VH 0.102 . TA18300 127 NNRVHDR|GL 0.154 . TA18300 134 GLYPGNK|NW 0.056 . TA18300 140 KNWLNNK|DL 0.066 . TA18300 149 IGTVLLK|VP 0.056 . TA18300 152 VLLKVPK|VG 0.057 . TA18300 167 NEIPALK|HV 0.068 . TA18300 182 LLMLSGK|G- 0.072 . ____________________________^_________________

  • Fasta :-

    >TA18300 ATGGATTGCATAAAGTCGGAATTTTATAAAACTCGAAATGAGTTTAGAATTTTCAAAAAG AGGCCTTTGGAATCTCTTGAATATATCCTGTCTATGTCTTCCATGATCTTTGTGGCACTC ATGTGTTGGAAGTTCGCTATCCTTCTTACTGGAACTGATTCTCCTGTGGTTGTAGTCTTG AGTGGAAGTATGGAACCTGCCTTTTATAGAGGTGATATATTGTTTTTGATGAAAAGGAAC GAGATAAACTCGGGCGATATCGTAGTATTTAAGCTTGAAGGCAGGGAGATACCAATTGTC CACAGAGCAATTACCTTACATGAGAGTAAGGATAATTTGTATGTACTTTCAAAGGGGGAT AATAATAGAGTCCATGATAGAGGTCTTTATCCCGGTAATAAGAACTGGCTAAATAACAAG GATCTTATCGGAACAGTTCTACTCAAGGTCCCAAAGGTCGGAATTCTCAGTATTTATCTC AATGAGATTCCGGCACTAAAACACGTAATCGTTTGTTTCGTTGTTCTACTAATGCTTTCC GGCAAAGGTTAA
  • Download Fasta

  • Fasta :-

    MDCIKSEFYKTRNEFRIFKKRPLESLEYILSMSSMIFVALMCWKFAILLTGTDSPVVVVL SGSMEPAFYRGDILFLMKRNEINSGDIVVFKLEGREIPIVHRAITLHESKDNLYVLSKGD NNRVHDRGLYPGNKNWLNNKDLIGTVLLKVPKVGILSIYLNEIPALKHVIVCFVVLLMLS GKG

  • title: Catalytic site
  • coordinates: S63,H101
No Results
No Results
No Results

TA18300      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India