TA18320 | proteasome subunit alpha type 2, putative

_IDPredictionOTHERSPmTPCS_Position
TA18320OTHER0.9998840.0000540.000062
No Results

  • Fasta :-

    >TA18320 MADDGEYSFSLTTFSPSGKLVQIEYALNGVAKGAPTLGIKATNGVVIAAEKKQPSTLIES DSLNKIDLFADHIGAVAAGMPADFRVVLKKGRKEAMKYKAIYGDDIPGSQLVKDVASIMQ EFTHSGGVRPFGISLLLASYDDDGPQLYQIDPSGAFFGWKATAIGSRMQNNNTFLEKRYN PEMELEDAIHIAILTLKEGFEGELTSENIEIGVVGPDKKFKILPPEMIEDYLNEVQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA18320.fa Sequence name : TA18320 Sequence length : 236 VALUES OF COMPUTED PARAMETERS Coef20 : 3.495 CoefTot : 0.141 ChDiff : -11 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.765 1.129 -0.003 0.519 MesoH : -0.518 0.333 -0.388 0.228 MuHd_075 : 9.325 6.965 1.914 1.935 MuHd_095 : 14.917 3.890 2.399 1.544 MuHd_100 : 14.780 4.331 3.011 1.251 MuHd_105 : 18.360 8.991 4.381 2.748 Hmax_075 : 15.167 6.417 1.064 3.687 Hmax_095 : 10.937 2.013 0.222 2.433 Hmax_100 : 11.900 3.100 0.373 2.960 Hmax_105 : 12.100 3.800 0.669 2.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8905 0.1095 DFMC : 0.8802 0.1198
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 236 TA18320 MADDGEYSFSLTTFSPSGKLVQIEYALNGVAKGAPTLGIKATNGVVIAAEKKQPSTLIESDSLNKIDLFADHIGAVAAGM 80 PADFRVVLKKGRKEAMKYKAIYGDDIPGSQLVKDVASIMQEFTHSGGVRPFGISLLLASYDDDGPQLYQIDPSGAFFGWK 160 ATAIGSRMQNNNTFLEKRYNPEMELEDAIHIAILTLKEGFEGELTSENIEIGVVGPDKKFKILPPEMIEDYLNEVQ 240 ................................................................................ 80 ................................................................................ 160 ............................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA18320 19 TFSPSGK|LV 0.084 . TA18320 32 ALNGVAK|GA 0.092 . TA18320 40 APTLGIK|AT 0.063 . TA18320 51 VVIAAEK|KQ 0.053 . TA18320 52 VIAAEKK|QP 0.097 . TA18320 65 ESDSLNK|ID 0.053 . TA18320 85 GMPADFR|VV 0.102 . TA18320 89 DFRVVLK|KG 0.063 . TA18320 90 FRVVLKK|GR 0.125 . TA18320 92 VVLKKGR|KE 0.074 . TA18320 93 VLKKGRK|EA 0.086 . TA18320 97 GRKEAMK|YK 0.086 . TA18320 99 KEAMKYK|AI 0.074 . TA18320 113 PGSQLVK|DV 0.097 . TA18320 129 THSGGVR|PF 0.143 . TA18320 160 GAFFGWK|AT 0.073 . TA18320 167 ATAIGSR|MQ 0.082 . TA18320 177 NNTFLEK|RY 0.064 . TA18320 178 NTFLEKR|YN 0.156 . TA18320 197 IAILTLK|EG 0.068 . TA18320 218 GVVGPDK|KF 0.060 . TA18320 219 VVGPDKK|FK 0.087 . TA18320 221 GPDKKFK|IL 0.074 . ____________________________^_________________

  • Fasta :-

    >TA18320 ATGGCAGACGATGGCGAGTATAGTTTTTCTCTAACTACTTTTAGCCCATCTGGCAAACTT GTTCAGATAGAATATGCCTTGAATGGTGTTGCTAAGGGTGCTCCAACTCTTGGAATCAAG GCAACTAATGGTGTTGTAATAGCCGCTGAAAAGAAACAGCCTTCCACATTAATTGAAAGC GATTCACTTAACAAAATTGACCTTTTCGCAGATCATATCGGAGCAGTGGCTGCTGGAATG CCTGCAGATTTTAGAGTTGTTTTAAAAAAGGGTAGAAAAGAGGCTATGAAGTATAAGGCT ATATATGGTGATGATATTCCCGGTTCACAACTTGTGAAAGACGTAGCATCAATTATGCAG GAATTTACACACTCAGGCGGAGTTCGACCCTTTGGAATCTCACTCTTACTTGCATCATAT GATGATGATGGACCACAGTTGTATCAAATAGACCCATCAGGTGCCTTTTTTGGTTGGAAG GCTACTGCAATTGGGAGTAGAATGCAAAATAACAACACATTTCTGGAGAAGAGATATAAC CCAGAAATGGAACTAGAAGATGCAATCCACATTGCAATTTTAACTCTAAAGGAAGGCTTT GAAGGAGAGTTAACCTCGGAAAATATCGAAATTGGAGTAGTGGGACCTGATAAAAAGTTT AAAATCCTACCACCCGAAATGATAGAAGATTATTTAAACGAAGTTCAATAA
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  • Fasta :-

    MADDGEYSFSLTTFSPSGKLVQIEYALNGVAKGAPTLGIKATNGVVIAAEKKQPSTLIES DSLNKIDLFADHIGAVAAGMPADFRVVLKKGRKEAMKYKAIYGDDIPGSQLVKDVASIMQ EFTHSGGVRPFGISLLLASYDDDGPQLYQIDPSGAFFGWKATAIGSRMQNNNTFLEKRYN PEMELEDAIHIAILTLKEGFEGELTSENIEIGVVGPDKKFKILPPEMIEDYLNEVQ

  • title: active site
  • coordinates: A34,E50,K52,K65,S166
No Results
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TA18320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India