TA19315 | proteasome subunit beta type 2, putative

_IDPredictionOTHERSPmTPCS_Position
TA19315OTHER0.9998620.0000940.000045
No Results

  • Fasta :-

    >TA19315 MDTLIGICGRDFVAVATDTYEKSSIVTLKNDDESKIMQIDDSKLLLLAGPSGDRMQFGEY IRKSVHYHRYKTSFSMTTKSMAHFVRQQLAEYLRKSPYQVDLLVAGFDNNGPKLYWIDYL ASSTEVDRAVHGYGGHFLRGLLDKEYHENLTVEEAVSMLKKCRHEVKNRFLLGQSNFRAK IIDKNGVHDVDIEDDDTPEVFRLHDPKAIKVD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA19315.fa Sequence name : TA19315 Sequence length : 212 VALUES OF COMPUTED PARAMETERS Coef20 : 3.972 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.012 1.076 -0.017 0.355 MesoH : -1.209 -0.232 -0.607 0.075 MuHd_075 : 10.898 5.357 3.880 1.538 MuHd_095 : 36.651 22.015 9.362 6.893 MuHd_100 : 24.079 17.276 6.321 5.664 MuHd_105 : 8.861 9.108 2.527 3.480 Hmax_075 : 4.600 12.133 1.486 4.433 Hmax_095 : 19.200 21.500 4.951 6.350 Hmax_100 : 19.200 21.500 4.951 6.350 Hmax_105 : 6.600 12.000 2.049 4.550 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9378 0.0622 DFMC : 0.9819 0.0181
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 212 TA19315 MDTLIGICGRDFVAVATDTYEKSSIVTLKNDDESKIMQIDDSKLLLLAGPSGDRMQFGEYIRKSVHYHRYKTSFSMTTKS 80 MAHFVRQQLAEYLRKSPYQVDLLVAGFDNNGPKLYWIDYLASSTEVDRAVHGYGGHFLRGLLDKEYHENLTVEEAVSMLK 160 KCRHEVKNRFLLGQSNFRAKIIDKNGVHDVDIEDDDTPEVFRLHDPKAIKVD 240 ................................................................................ 80 ................................................................................ 160 .................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA19315 10 LIGICGR|DF 0.110 . TA19315 22 ATDTYEK|SS 0.067 . TA19315 29 SSIVTLK|ND 0.079 . TA19315 35 KNDDESK|IM 0.057 . TA19315 43 MQIDDSK|LL 0.061 . TA19315 54 AGPSGDR|MQ 0.064 . TA19315 62 QFGEYIR|KS 0.070 . TA19315 63 FGEYIRK|SV 0.139 . TA19315 69 KSVHYHR|YK 0.096 . TA19315 71 VHYHRYK|TS 0.065 . TA19315 79 SFSMTTK|SM 0.092 . TA19315 86 SMAHFVR|QQ 0.100 . TA19315 94 QLAEYLR|KS 0.076 . TA19315 95 LAEYLRK|SP 0.102 . TA19315 113 FDNNGPK|LY 0.063 . TA19315 128 SSTEVDR|AV 0.166 . TA19315 139 YGGHFLR|GL 0.135 . TA19315 144 LRGLLDK|EY 0.080 . TA19315 160 EAVSMLK|KC 0.057 . TA19315 161 AVSMLKK|CR 0.117 . TA19315 163 SMLKKCR|HE 0.093 . TA19315 167 KCRHEVK|NR 0.064 . TA19315 169 RHEVKNR|FL 0.104 . TA19315 178 LGQSNFR|AK 0.081 . TA19315 180 QSNFRAK|II 0.102 . TA19315 184 RAKIIDK|NG 0.057 . TA19315 202 DTPEVFR|LH 0.075 . TA19315 207 FRLHDPK|AI 0.071 . TA19315 210 HDPKAIK|VD 0.058 . ____________________________^_________________

  • Fasta :-

    >TA19315 ATGGACACTTTAATTGGTATTTGTGGCCGTGATTTCGTGGCTGTAGCCACCGATACCTAT GAGAAGTCTTCAATAGTGACGTTGAAGAACGACGACGAGAGTAAAATAATGCAAATCGAC GACTCGAAGCTTCTATTGTTGGCTGGACCTTCGGGTGACCGTATGCAGTTTGGAGAATAC ATTAGAAAATCAGTCCACTACCACCGCTACAAAACTTCGTTTAGCATGACCACAAAATCA ATGGCTCACTTTGTAAGACAACAATTGGCCGAATATTTAAGGAAAAGCCCTTATCAAGTT GATTTACTAGTTGCAGGATTTGATAATAATGGACCTAAATTATATTGGATAGATTACTTG GCAAGTTCAACTGAAGTTGACAGAGCAGTTCACGGATATGGAGGTCACTTTCTCAGGGGT TTACTAGACAAGGAATACCACGAGAATTTGACTGTTGAGGAGGCTGTTTCAATGTTAAAG AAGTGCCGCCACGAAGTCAAAAATCGCTTCCTCCTCGGTCAATCGAACTTTAGAGCAAAG ATAATTGATAAAAACGGGGTCCACGATGTCGATATTGAAGATGATGACACCCCTGAAGTG TTCCGACTTCATGATCCAAAAGCCATTAAAGTTGATTAA
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  • Fasta :-

    MDTLIGICGRDFVAVATDTYEKSSIVTLKNDDESKIMQIDDSKLLLLAGPSGDRMQFGEY IRKSVHYHRYKTSFSMTTKSMAHFVRQQLAEYLRKSPYQVDLLVAGFDNNGPKLYWIDYL ASSTEVDRAVHGYGGHFLRGLLDKEYHENLTVEEAVSMLKKCRHEVKNRFLLGQSNFRAK IIDKNGVHDVDIEDDDTPEVFRLHDPKAIKVD

    No Results
No Results
No Results
IDSitePeptideScoreMethod
TA1931596 SYLRKSPYQV0.996unsp

TA19315      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India