TA21405 | 226S proteasome regulatory particle, putative

_IDPredictionOTHERSPmTPCS_Position
TA21405OTHER0.9999900.0000070.000003
No Results

  • Fasta :-

    >TA21405 MASNEEPIDLSEVCLLSDADVRARINMIDAEVKILKSEHTRLKSQQKMAQERIKDNLEKI QLNKQLPYLVANVVELLDMDEEYEEEYGSAQNLESRPKGKSLVIKTSTRQTIYLPVIGLI PHTELKPGELVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPTEDYSDIGGLDKQIQELIE AIVLPITHKEKFEKIGIKPPKGILMHGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMF IGDGAKMVRDAFNLAKEKAPTIIFIDEIDAIGTKRFDSELSGDREVQRTMLELLNQLDGF STDDKVKVIAATNRPYTLDPALLRSGRLDRKIELPHPNEEARAHILQIHSRKMNVHKDTN YMELSRSTENFNGAQLKAVCIEAGMVALRRGATELDHEDFVEGIAMVQAKKKNPLNYLT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA21405.fa Sequence name : TA21405 Sequence length : 419 VALUES OF COMPUTED PARAMETERS Coef20 : 3.427 CoefTot : 0.119 ChDiff : -7 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.012 -0.103 0.465 MesoH : -0.621 0.285 -0.417 0.197 MuHd_075 : 15.207 5.656 1.659 2.212 MuHd_095 : 9.333 1.622 3.402 0.890 MuHd_100 : 10.315 2.621 4.087 0.868 MuHd_105 : 18.852 3.202 5.556 0.532 Hmax_075 : 0.300 5.833 -1.172 2.140 Hmax_095 : -0.300 6.200 0.060 2.540 Hmax_100 : 2.000 7.200 0.737 2.100 Hmax_105 : 9.800 8.517 2.871 2.625 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9802 0.0198 DFMC : 0.9425 0.0575
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 419 TA21405 MASNEEPIDLSEVCLLSDADVRARINMIDAEVKILKSEHTRLKSQQKMAQERIKDNLEKIQLNKQLPYLVANVVELLDMD 80 EEYEEEYGSAQNLESRPKGKSLVIKTSTRQTIYLPVIGLIPHTELKPGELVGVNKDSYLVLDKLPPEYDNRVKAMEVCEK 160 PTEDYSDIGGLDKQIQELIEAIVLPITHKEKFEKIGIKPPKGILMHGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMF 240 IGDGAKMVRDAFNLAKEKAPTIIFIDEIDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDKVKVIAATNRPYTLDP 320 ALLRSGRLDRKIELPHPNEEARAHILQIHSRKMNVHKDTNYMELSRSTENFNGAQLKAVCIEAGMVALRRGATELDHEDF 400 VEGIAMVQAKKKNPLNYLT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA21405 22 LSDADVR|AR 0.081 . TA21405 24 DADVRAR|IN 0.081 . TA21405 33 MIDAEVK|IL 0.059 . TA21405 36 AEVKILK|SE 0.079 . TA21405 41 LKSEHTR|LK 0.146 . TA21405 43 SEHTRLK|SQ 0.080 . TA21405 47 RLKSQQK|MA 0.077 . TA21405 52 QKMAQER|IK 0.113 . TA21405 54 MAQERIK|DN 0.075 . TA21405 59 IKDNLEK|IQ 0.059 . TA21405 64 EKIQLNK|QL 0.059 . TA21405 96 AQNLESR|PK 0.119 . TA21405 98 NLESRPK|GK 0.077 . TA21405 100 ESRPKGK|SL 0.112 . TA21405 105 GKSLVIK|TS 0.082 . TA21405 109 VIKTSTR|QT 0.084 . TA21405 126 IPHTELK|PG 0.071 . TA21405 135 ELVGVNK|DS 0.074 . TA21405 143 SYLVLDK|LP 0.052 . TA21405 151 PPEYDNR|VK 0.072 . TA21405 153 EYDNRVK|AM 0.067 . TA21405 160 AMEVCEK|PT 0.070 . TA21405 173 DIGGLDK|QI 0.063 . TA21405 189 VLPITHK|EK 0.061 . TA21405 191 PITHKEK|FE 0.066 . TA21405 194 HKEKFEK|IG 0.068 . TA21405 198 FEKIGIK|PP 0.070 . TA21405 201 IGIKPPK|GI 0.083 . TA21405 213 GPPGTGK|TL 0.059 . TA21405 218 GKTLLAR|AC 0.099 . TA21405 225 ACAAQTK|AT 0.076 . TA21405 230 TKATFLK|LA 0.128 . TA21405 246 FIGDGAK|MV 0.085 . TA21405 249 DGAKMVR|DA 0.122 . TA21405 256 DAFNLAK|EK 0.063 . TA21405 258 FNLAKEK|AP 0.062 . TA21405 274 IDAIGTK|RF 0.062 . TA21405 275 DAIGTKR|FD 0.162 . TA21405 284 SELSGDR|EV 0.080 . TA21405 288 GDREVQR|TM 0.096 . TA21405 305 GFSTDDK|VK 0.059 . TA21405 307 STDDKVK|VI 0.061 . TA21405 314 VIAATNR|PY 0.081 . TA21405 324 LDPALLR|SG 0.085 . TA21405 327 ALLRSGR|LD 0.220 . TA21405 330 RSGRLDR|KI 0.247 . TA21405 331 SGRLDRK|IE 0.071 . TA21405 342 HPNEEAR|AH 0.137 . TA21405 351 ILQIHSR|KM 0.101 . TA21405 352 LQIHSRK|MN 0.095 . TA21405 357 RKMNVHK|DT 0.102 . TA21405 366 NYMELSR|ST 0.112 . TA21405 377 FNGAQLK|AV 0.100 . TA21405 389 AGMVALR|RG 0.098 . TA21405 390 GMVALRR|GA 0.179 . TA21405 410 IAMVQAK|KK 0.075 . TA21405 411 AMVQAKK|KN 0.071 . TA21405 412 MVQAKKK|NP 0.104 . ____________________________^_________________

  • Fasta :-

    >TA21405 ATGGCCTCAAATGAGGAGCCAATAGATTTATCAGAAGTTTGCCTCTTAAGTGACGCTGAC GTCAGGGCTCGTATCAACATGATTGACGCGGAGGTGAAGATTCTGAAGAGCGAACACACC AGGCTTAAATCGCAACAAAAAATGGCCCAAGAGCGTATAAAAGATAATTTAGAAAAGATA CAATTAAACAAACAACTTCCCTATCTCGTTGCAAATGTTGTTGAGTTATTGGATATGGAT GAGGAGTATGAGGAGGAATATGGTTCAGCACAGAACTTAGAATCGAGACCAAAAGGCAAA TCACTTGTTATTAAAACCTCCACAAGACAGACGATATATTTACCTGTTATTGGATTGATA CCACATACTGAGTTGAAGCCAGGGGAGTTGGTAGGTGTAAATAAGGACAGTTATTTGGTT TTGGATAAACTTCCACCAGAATATGATAACCGTGTTAAAGCTATGGAAGTCTGCGAAAAG CCAACAGAAGATTATTCAGACATCGGAGGACTCGATAAACAAATTCAAGAACTCATTGAA GCTATTGTATTACCAATAACGCATAAAGAGAAATTTGAGAAAATAGGTATAAAACCACCA AAAGGTATATTAATGCATGGACCACCTGGAACTGGTAAAACTCTACTAGCCAGAGCATGT GCAGCTCAGACAAAAGCTACCTTTTTGAAACTTGCTGGACCACAATTGGTCCAAATGTTC ATTGGGGATGGTGCGAAGATGGTCAGAGATGCCTTTAATCTCGCTAAAGAAAAGGCCCCA ACCATTATATTCATAGATGAGATAGATGCAATTGGTACGAAGAGATTTGATAGTGAGTTA TCTGGTGACCGTGAGGTTCAGAGAACAATGTTGGAACTTCTGAACCAGCTTGATGGGTTT AGCACTGATGACAAGGTCAAAGTTATCGCTGCAACTAACCGACCATACACACTTGATCCT GCACTACTTAGATCCGGCAGACTTGACCGTAAAATCGAACTTCCACATCCAAACGAAGAG GCTAGAGCTCATATATTACAAATACATTCGAGGAAAATGAATGTCCACAAGGATACAAAT TATATGGAATTGTCAAGATCTACTGAAAATTTCAATGGAGCACAACTTAAAGCCGTGTGC ATAGAGGCTGGAATGGTCGCGTTACGTAGAGGAGCAACAGAGTTAGATCACGAGGACTTT GTGGAGGGAATAGCAATGGTCCAAGCCAAGAAGAAGAACCCACTTAATTACCTTACCTAA
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  • Fasta :-

    MASNEEPIDLSEVCLLSDADVRARINMIDAEVKILKSEHTRLKSQQKMAQERIKDNLEKI QLNKQLPYLVANVVELLDMDEEYEEEYGSAQNLESRPKGKSLVIKTSTRQTIYLPVIGLI PHTELKPGELVGVNKDSYLVLDKLPPEYDNRVKAMEVCEKPTEDYSDIGGLDKQIQELIE AIVLPITHKEKFEKIGIKPPKGILMHGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMF IGDGAKMVRDAFNLAKEKAPTIIFIDEIDAIGTKRFDSELSGDREVQRTMLELLNQLDGF STDDKVKVIAATNRPYTLDPALLRSGRLDRKIELPHPNEEARAHILQIHSRKMNVHKDTN YMELSRSTENFNGAQLKAVCIEAGMVALRRGATELDHEDFVEGIAMVQAKKKNPLNYLT

  • title: ATP binding site
  • coordinates: P208,P209,G210,T211,G212,K213,T214,L215,D266,N313
No Results
No Results
IDSitePeptideScoreMethod
TA21405278 SKRFDSELSG0.994unsp

TA21405      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India