TGME49_202680 | peptidase M16, alpha subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_202680mTP0.0450730.0010180.953909CS pos: 55-56. KRF-LS. Pr: 0.1124
No Results

  • Fasta :-

    >TGME49_202680 MNASILFRRNAPGVSTCLRRRCLRPAALAAASASGVSTPASGVWTPAFQRTEKRFLSGAA LQPKAGPAPEYRRVPFVKEDMEKVMEEVPEFKYYYVGKENTKGNVYEGIPLDQSILEPAD LRDYVPPHSNIQYSKLDNGLRIASMDRGGLTASLGLFVHAGTRFEDVTNFGVTHMIQNLA FASTAHLSLLRTVKTIEVLGANAGCVVGREHLVYSAECLRSHMPLLVPMLTGNVLFPRFL PWELKACKEKLIMARKRLEHMPDQMVSELLHTTAWHNNTLGHKLHCTERSLGHYNPDVIR HYMLQHFSPENMVFVGVNVNHDELCTWLMRAFVDYNAIPPSKRTVASPVYTGGDVRLETP SPHAHMAIAFETPGGWNGGDLVAYSVLQTILGGGGAFSTGGPGKGMYTRLYLNVLNQNEW VESAMAFNTQYTDSGIFGLYMLADPTKSANAVKVMAEQFGKMVSVTKEELQRAKNSLKSS IFMNLECRGIVMEDVGRQLLMSNRVISPQEFCTAIDAVTEADIKRVVDAMYKKPPTVVAY GDVSTVPHYEEVRAALRAAGVGK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_202680.fa Sequence name : TGME49_202680 Sequence length : 563 VALUES OF COMPUTED PARAMETERS Coef20 : 4.920 CoefTot : 0.512 ChDiff : 5 ZoneTo : 69 KR : 10 DE : 1 CleavSite : 64 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.447 1.341 0.205 0.614 MesoH : 0.051 0.638 -0.242 0.291 MuHd_075 : 40.372 24.005 12.582 8.840 MuHd_095 : 44.235 25.562 10.448 10.378 MuHd_100 : 35.336 20.703 8.337 8.484 MuHd_105 : 33.716 19.441 8.939 7.322 Hmax_075 : 12.133 18.317 5.328 5.472 Hmax_095 : 8.500 11.900 1.737 3.350 Hmax_100 : 13.500 15.400 3.114 4.630 Hmax_105 : 15.517 16.683 4.346 4.818 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0015 0.9985 DFMC : 0.0012 0.9988 This protein is probably imported in mitochondria. f(Ser) = 0.1014 f(Arg) = 0.1159 CMi = 0.43668 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 563 TGME49_202680 MNASILFRRNAPGVSTCLRRRCLRPAALAAASASGVSTPASGVWTPAFQRTEKRFLSGAALQPKAGPAPEYRRVPFVKED 80 MEKVMEEVPEFKYYYVGKENTKGNVYEGIPLDQSILEPADLRDYVPPHSNIQYSKLDNGLRIASMDRGGLTASLGLFVHA 160 GTRFEDVTNFGVTHMIQNLAFASTAHLSLLRTVKTIEVLGANAGCVVGREHLVYSAECLRSHMPLLVPMLTGNVLFPRFL 240 PWELKACKEKLIMARKRLEHMPDQMVSELLHTTAWHNNTLGHKLHCTERSLGHYNPDVIRHYMLQHFSPENMVFVGVNVN 320 HDELCTWLMRAFVDYNAIPPSKRTVASPVYTGGDVRLETPSPHAHMAIAFETPGGWNGGDLVAYSVLQTILGGGGAFSTG 400 GPGKGMYTRLYLNVLNQNEWVESAMAFNTQYTDSGIFGLYMLADPTKSANAVKVMAEQFGKMVSVTKEELQRAKNSLKSS 480 IFMNLECRGIVMEDVGRQLLMSNRVISPQEFCTAIDAVTEADIKRVVDAMYKKPPTVVAYGDVSTVPHYEEVRAALRAAG 560 VGK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_202680 8 NASILFR|RN 0.114 . TGME49_202680 9 ASILFRR|NA 0.161 . TGME49_202680 19 GVSTCLR|RR 0.073 . TGME49_202680 20 VSTCLRR|RC 0.082 . TGME49_202680 21 STCLRRR|CL 0.139 . TGME49_202680 24 LRRRCLR|PA 0.271 . TGME49_202680 50 WTPAFQR|TE 0.070 . TGME49_202680 53 AFQRTEK|RF 0.091 . TGME49_202680 54 FQRTEKR|FL 0.319 . TGME49_202680 64 GAALQPK|AG 0.065 . TGME49_202680 72 GPAPEYR|RV 0.126 . TGME49_202680 73 PAPEYRR|VP 0.122 . TGME49_202680 78 RRVPFVK|ED 0.083 . TGME49_202680 83 VKEDMEK|VM 0.064 . TGME49_202680 92 EEVPEFK|YY 0.068 . TGME49_202680 98 KYYYVGK|EN 0.076 . TGME49_202680 102 VGKENTK|GN 0.061 . TGME49_202680 122 LEPADLR|DY 0.073 . TGME49_202680 135 SNIQYSK|LD 0.063 . TGME49_202680 141 KLDNGLR|IA 0.095 . TGME49_202680 147 RIASMDR|GG 0.078 . TGME49_202680 163 FVHAGTR|FE 0.083 . TGME49_202680 191 AHLSLLR|TV 0.096 . TGME49_202680 194 SLLRTVK|TI 0.137 . TGME49_202680 209 AGCVVGR|EH 0.078 . TGME49_202680 220 YSAECLR|SH 0.107 . TGME49_202680 238 GNVLFPR|FL 0.121 . TGME49_202680 245 FLPWELK|AC 0.063 . TGME49_202680 248 WELKACK|EK 0.053 . TGME49_202680 250 LKACKEK|LI 0.073 . TGME49_202680 255 EKLIMAR|KR 0.080 . TGME49_202680 256 KLIMARK|RL 0.102 . TGME49_202680 257 LIMARKR|LE 0.173 . TGME49_202680 283 NNTLGHK|LH 0.057 . TGME49_202680 289 KLHCTER|SL 0.218 . TGME49_202680 300 YNPDVIR|HY 0.088 . TGME49_202680 330 LCTWLMR|AF 0.077 . TGME49_202680 342 NAIPPSK|RT 0.059 . TGME49_202680 343 AIPPSKR|TV 0.183 . TGME49_202680 356 YTGGDVR|LE 0.079 . TGME49_202680 404 STGGPGK|GM 0.070 . TGME49_202680 409 GKGMYTR|LY 0.105 . TGME49_202680 447 MLADPTK|SA 0.124 . TGME49_202680 453 KSANAVK|VM 0.066 . TGME49_202680 461 MAEQFGK|MV 0.082 . TGME49_202680 467 KMVSVTK|EE 0.057 . TGME49_202680 472 TKEELQR|AK 0.082 . TGME49_202680 474 EELQRAK|NS 0.057 . TGME49_202680 478 RAKNSLK|SS 0.073 . TGME49_202680 488 FMNLECR|GI 0.091 . TGME49_202680 497 VMEDVGR|QL 0.079 . TGME49_202680 504 QLLMSNR|VI 0.123 . TGME49_202680 524 VTEADIK|RV 0.060 . TGME49_202680 525 TEADIKR|VV 0.341 . TGME49_202680 532 VVDAMYK|KP 0.054 . TGME49_202680 533 VDAMYKK|PP 0.085 . TGME49_202680 553 PHYEEVR|AA 0.084 . TGME49_202680 557 EVRAALR|AA 0.110 . TGME49_202680 563 RAAGVGK|-- 0.078 . ____________________________^_________________

  • Fasta :-

    >TGME49_202680 TCTCGGTTAAAAAAGTTTCGTATCGTGTGAGAACACGATGAGGTCCCTACGACACATACA ACGCGTAGATTTGTCGCCTGTTGAAGTTCCCCATGATTTACAATCAGAGTGGCGAAAGAC TCTCACCACAAGAATAGCGAGGTCATTTTAGGATCAGAATAACGAGAGCACTTTACTACC AGAATGGGGAGAGCACTGTTCCATCATAATAACGAGAGCAATCTGCAAGACAAACACCAA GAGCATTCTCTCAGAGTTTCCAGCAGGTAAACTCCACTCCCCATTCGGTCCGTAACTGCA CAGCACCAGAGTTCGCTGTACGGGTAAAGAATCTCTGCCTCCATTGAATGGAGAAAACCA AGCATTCTCCTCGACTTATCCCACGTTCAGAATCGAAATGGAGCACATTTGCCTTTCGTG CAAGGGCGTTTTACTGACGGACTCGAGTGTTTGAGGACGCCAATCGTCTACCTCCCAGAG GTCTTGTTTTCCCCATTTCCTTCGGATTTCGCTCCTTAGAAAATCCAAGCTACGAATGGT GTAGAAGGTAAGCGGTGTATCGCGGGCTCGTCTCCCAGATCTATTGTCTACAAAGCCGAA AGTTCAGAACTTCAGGCAGAGGAGAACAGTGGTATCACACTCCCACTCCCGTAGTGCTGA GGTGGTTTATAGCGGGGCACTTCTTCGCTTTGTGAACGTCAGCATTCTACCAAGCAAACC ACCTCCGTCCACATTCCAGTGAATCGCGAACTCCTTTCTTTGTGAAAATTGTCCTGCCAC GGAGAGGAGGCCCTTTCTCTTCAGCTCGTCCTGCGCGTTGCGGGGCTCAGGCGTCTCAGG GTAAGCGCGCATGCATTGACGGGCAAAAAAGCGGTGGCAAGTCCTTTTCTCAGGGGGCGG CGCCCAAAGGCTTTTCCTGGGTTGCTGCAGCAGCACGCGTGTGGTACTTTTGCGAGGAAG ACCGAGAACTGGAGTGCCTGGCAACTTTTCCGCTCTCTTGGAAGTCACTTCTTTCTGTCG CTGCGGCACACCTAGGACACAGCTCCACGCTTCGGCTCTGGAACGTACTCTCCTGGGATG CGCGTCCTCTAGACGGAGGCGTTCCTCGTTCCGCGACGTTTTCCTTGTGCATCGGACCTC TTCCTCCCTTCTCAGCCTCTCCTCCCCGCTTTCTCCCGCCTACACTTTTCTACCGGGAGC AGTCGCGCACTTCGTTCTAGCACGCTCTCGCCTACGGCGCTGCTTTCGACTTCCGCGTTC CCGTCCCTCCCCTGACGGAACGCAGCCTTCCTTTCCGCGCTTCCTTCCTTGACAACGCCG CACTTGCCACTTTCCCGCGTGGCTGCCTCCTCGTCAACATGAACGCCTCGATTCTTTTCC GCAGAAACGCACCAGGCGTTTCGACCTGCCTTCGACGCAGGTGTCTGCGTCCTGCCGCGC TCGCCGCAGCGTCCGCTTCGGGTGTATCGACACCTGCCTCGGGTGTATGGACGCCGGCGT TCCAGCGCACAGAGAAGCGGTTTCTGAGCGGCGCGGCGCTGCAGCCGAAGGCGGGTCCGG CGCCTGAGTACCGGCGCGTCCCGTTCGTCAAGGAAGACATGGAGAAAGTCATGGAAGAAG TCCCGGAATTCAAGTACTACTACGTCGGCAAGGAGAACACCAAGGGAAACGTGTACGAGG GCATCCCCCTCGACCAAAGCATTCTGGAGCCTGCGGATCTCCGAGACTACGTCCCACCCC ACAGCAACATCCAATACTCGAAGCTGGACAACGGCTTGCGGATTGCGTCGATGGATCGAG GAGGCCTGACCGCCTCCCTGGGGCTCTTCGTGCATGCAGGCACTCGTTTTGAAGACGTCA CGAACTTTGGCGTCACCCACATGATCCAGAACCTTGCTTTCGCCTCCACGGCTCATCTGT CGCTTTTGCGAACCGTCAAAACTATCGAGGTGTTGGGCGCGAACGCGGGATGCGTCGTCG GCCGGGAACACCTGGTGTACAGTGCAGAGTGCCTGCGTTCGCACATGCCGCTGCTGGTCC CGATGCTGACGGGGAACGTCCTCTTTCCTCGCTTCCTTCCCTGGGAGCTGAAGGCATGCA AGGAGAAACTCATCATGGCTCGCAAGCGCCTAGAGCACATGCCAGACCAAATGGTCTCTG AACTGCTGCACACGACAGCGTGGCACAACAACACTTTGGGTCACAAGCTGCACTGCACCG AGAGGAGCCTCGGCCATTACAACCCCGACGTCATCCGCCACTACATGCTTCAGCACTTCT CCCCTGAAAACATGGTGTTCGTTGGCGTGAATGTGAACCACGACGAGTTGTGCACATGGC TGATGCGCGCATTTGTGGACTACAACGCCATTCCGCCTTCGAAGCGAACTGTCGCTTCGC CTGTGTACACTGGAGGAGATGTGCGCCTGGAAACTCCGTCCCCGCATGCACACATGGCCA TTGCCTTTGAAACGCCGGGCGGCTGGAACGGAGGCGACTTGGTGGCGTACTCTGTTCTGC AAACAATCCTTGGTGGCGGCGGCGCGTTCTCGACGGGAGGACCAGGGAAAGGCATGTACA CTCGACTGTACTTGAACGTGCTCAACCAGAATGAGTGGGTCGAGAGCGCCATGGCGTTCA ACACCCAGTACACCGACTCAGGCATCTTTGGCCTGTACATGCTCGCAGATCCGACCAAGT CCGCGAACGCCGTGAAGGTGATGGCGGAGCAGTTCGGCAAAATGGTCTCTGTAACGAAGG AGGAGCTGCAGCGCGCGAAGAATTCGCTCAAGTCGTCAATCTTCATGAATCTCGAGTGCC GCGGCATCGTCATGGAAGACGTCGGCCGCCAACTGCTGATGAGCAACCGCGTCATCTCCC CGCAGGAGTTCTGCACGGCCATCGACGCCGTGACCGAGGCTGACATCAAGAGAGTTGTGG ACGCCATGTACAAGAAGCCGCCGACCGTCGTTGCCTACGGTGACGTTTCGACCGTCCCGC ACTACGAGGAGGTACGCGCTGCTCTCCGAGCCGCGGGCGTCGGCAAGTGAAGCTGAAAAG CAGGGCGCAGAGAGAATTGGAAAGGTCTCGGAAACGAAGAAAGCTGCATGCGCCGCCCGT CCTCCGAGAGGAAGGAACGTGTCTACCTCGCGTTCGAGAGAGAAGACAAAACCAAAAAAG AGAGAGAACGAGAAGGAGATCAACAGAGAGAGAACGAGAAGGAGATCAACAGAGAGAGAG CGAGAAGGAGATCAACAGAGAGAGAACGAGAAGGAGATCAACAGAGAGAGAACGAGAAGG AGATCAACAGAGCGAACTGAAAGAGACACACCTTGCGTGGATGTGGGCTGCAGCGAGGAC GCGCGTAGTCTGATTGGTATGGTTCTCTCTTCCTAGCAGACAGATGCGTTACACTGTGTG GGGCAGACCAGATCACTGGTTACGTTTCTCTCTTTCGCTTCTTCTTGGAACTTTTGTCCC CGTTCTCAGGTTCCCTGAGAGCGAGTGTTTGTCCAGGTTCCTCCTCTCCGCACTGTTTTT GAGGGAGGGAAGATGTTTTCTCGCTTTGTAGGCTTCTCGCGATTGTGCGTCGCCGGCGGC CCCGCTCTCCGTTTACTCAGCTCATTTATGGAAGCCTGGGGAGGACAGCCACCGCTTGCT GAGAACAGAGGATGCGGAGGCGGTGCCGACGAGTCTTCAACTCTGGACATTCTGTAGAAC TCGAGATCAGTTTTCATGGTTTCTCTTCGCTGTTGGAGCCAGACGCGCGTTGTCTCGGCT TCCGATAGCTGGCTTGCGGCACCTTAAACGGTGCGAGCAACCAGG
  • Download Fasta

  • Fasta :-

    MNASILFRRNAPGVSTCLRRRCLRPAALAAASASGVSTPASGVWTPAFQRTEKRFLSGAA LQPKAGPAPEYRRVPFVKEDMEKVMEEVPEFKYYYVGKENTKGNVYEGIPLDQSILEPAD LRDYVPPHSNIQYSKLDNGLRIASMDRGGLTASLGLFVHAGTRFEDVTNFGVTHMIQNLA FASTAHLSLLRTVKTIEVLGANAGCVVGREHLVYSAECLRSHMPLLVPMLTGNVLFPRFL PWELKACKEKLIMARKRLEHMPDQMVSELLHTTAWHNNTLGHKLHCTERSLGHYNPDVIR HYMLQHFSPENMVFVGVNVNHDELCTWLMRAFVDYNAIPPSKRTVASPVYTGGDVRLETP SPHAHMAIAFETPGGWNGGDLVAYSVLQTILGGGGAFSTGGPGKGMYTRLYLNVLNQNEW VESAMAFNTQYTDSGIFGLYMLADPTKSANAVKVMAEQFGKMVSVTKEELQRAKNSLKSS IFMNLECRGIVMEDVGRQLLMSNRVISPQEFCTAIDAVTEADIKRVVDAMYKKPPTVVAY GDVSTVPHYEEVRAALRAAGVGK

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IDSitePeptideScoreMethod
TGME49_202680507 SNRVISPQEF0.996unsp

TGME49_002680      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India