TGME49_202910 | zinc carboxypeptidase superfamily protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_202910SP0.0150590.9844180.000523CS pos: 22-23. ASA-EL. Pr: 0.7677
No Results

  • Fasta :-

    >TGME49_202910 MKCVPGLAVIAGTFVAMLRASAELPHYYHTTPQLKEEVEKLGKDCDGFSVHHEPIGNDHT IEFVTVSRASGTRDRFFLLAGEHSRELISAESALHFLQVLCERETKLAEKAGKVLQHTNI QVVVNGNPVSRAKVEAGDFCLRGNENNVDLNRNWGDHWNSAAANAETSPGNKAFSEPETQ AFAKAVTSFKPHIFLSVHSGTLGMYMPWAFSAEEPARNEQAMESVLKEVDEKFCRCPYGA AGKEVGYQSSGTCLDFVYDKLKTPLSFAVEVCNLPRASDFHFKSNIVRFTPTPTDKLSSI KHGRRKSSFWIPTQTSVD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_202910.fa Sequence name : TGME49_202910 Sequence length : 318 VALUES OF COMPUTED PARAMETERS Coef20 : 4.477 CoefTot : 0.330 ChDiff : -3 ZoneTo : 22 KR : 2 DE : 0 CleavSite : 21 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.553 1.782 0.270 0.613 MesoH : -0.719 -0.014 -0.469 0.126 MuHd_075 : 13.031 10.019 3.870 2.982 MuHd_095 : 17.550 13.994 5.263 3.707 MuHd_100 : 23.993 20.140 7.276 5.650 MuHd_105 : 30.662 20.928 8.142 6.735 Hmax_075 : 15.750 21.350 4.482 7.023 Hmax_095 : 16.800 23.400 5.438 6.667 Hmax_100 : 19.400 23.400 5.438 6.840 Hmax_105 : 20.533 22.983 5.465 7.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9086 0.0914 DFMC : 0.9107 0.0893
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 318 TGME49_202910 MKCVPGLAVIAGTFVAMLRASAELPHYYHTTPQLKEEVEKLGKDCDGFSVHHEPIGNDHTIEFVTVSRASGTRDRFFLLA 80 GEHSRELISAESALHFLQVLCERETKLAEKAGKVLQHTNIQVVVNGNPVSRAKVEAGDFCLRGNENNVDLNRNWGDHWNS 160 AAANAETSPGNKAFSEPETQAFAKAVTSFKPHIFLSVHSGTLGMYMPWAFSAEEPARNEQAMESVLKEVDEKFCRCPYGA 240 AGKEVGYQSSGTCLDFVYDKLKTPLSFAVEVCNLPRASDFHFKSNIVRFTPTPTDKLSSIKHGRRKSSFWIPTQTSVD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_202910 2 -----MK|CV 0.073 . TGME49_202910 19 TFVAMLR|AS 0.081 . TGME49_202910 35 HTTPQLK|EE 0.055 . TGME49_202910 40 LKEEVEK|LG 0.064 . TGME49_202910 43 EVEKLGK|DC 0.063 . TGME49_202910 68 EFVTVSR|AS 0.097 . TGME49_202910 73 SRASGTR|DR 0.112 . TGME49_202910 75 ASGTRDR|FF 0.101 . TGME49_202910 85 LAGEHSR|EL 0.104 . TGME49_202910 103 LQVLCER|ET 0.084 . TGME49_202910 106 LCERETK|LA 0.164 . TGME49_202910 110 ETKLAEK|AG 0.060 . TGME49_202910 113 LAEKAGK|VL 0.066 . TGME49_202910 131 NGNPVSR|AK 0.101 . TGME49_202910 133 NPVSRAK|VE 0.058 . TGME49_202910 142 AGDFCLR|GN 0.079 . TGME49_202910 152 NNVDLNR|NW 0.111 . TGME49_202910 172 ETSPGNK|AF 0.075 . TGME49_202910 184 ETQAFAK|AV 0.098 . TGME49_202910 190 KAVTSFK|PH 0.058 . TGME49_202910 217 SAEEPAR|NE 0.106 . TGME49_202910 227 AMESVLK|EV 0.080 . TGME49_202910 232 LKEVDEK|FC 0.060 . TGME49_202910 235 VDEKFCR|CP 0.082 . TGME49_202910 243 PYGAAGK|EV 0.081 . TGME49_202910 260 LDFVYDK|LK 0.057 . TGME49_202910 262 FVYDKLK|TP 0.054 . TGME49_202910 276 EVCNLPR|AS 0.091 . TGME49_202910 283 ASDFHFK|SN 0.086 . TGME49_202910 288 FKSNIVR|FT 0.113 . TGME49_202910 296 TPTPTDK|LS 0.066 . TGME49_202910 301 DKLSSIK|HG 0.059 . TGME49_202910 304 SSIKHGR|RK 0.090 . TGME49_202910 305 SIKHGRR|KS 0.144 . TGME49_202910 306 IKHGRRK|SS 0.191 . ____________________________^_________________

  • Fasta :-

    >TGME49_202910 AGTTCTCCGAACATTTAGTCGCAAGCTGCCAAACAATGAAGTGCGTCCCTGGGCTGGCTG TCATCGCTGGCACTTTTGTGGCGATGCTAAGGGCGTCCGCCGAGTTGCCACACTACTACC ATACTACGCCCCAACTCAAAGAAGAGGTGGAGAAATTAGGGAAGGACTGCGACGGATTTA GTGTCCACCATGAGCCGATCGGCAACGACCACACTATTGAGTTTGTTACTGTCTCACGTG CAAGCGGAACTCGAGACAGATTCTTCCTGCTGGCGGGTGAACACTCAAGGGAATTAATTT CGGCGGAAAGCGCCCTGCACTTTCTCCAGGTCCTATGTGAAAGAGAAACGAAGCTGGCAG AGAAAGCAGGAAAAGTGCTTCAGCACACAAACATCCAAGTTGTCGTGAACGGAAATCCGG TGTCCCGGGCGAAGGTGGAGGCGGGTGATTTCTGTCTGCGAGGAAACGAGAATAACGTCG ACTTAAACCGCAACTGGGGAGATCACTGGAACTCTGCAGCGGCAAACGCGGAGACAAGTC CGGGCAATAAAGCTTTCTCTGAGCCTGAGACGCAAGCATTTGCCAAAGCTGTCACGTCGT TCAAGCCACACATCTTCCTTTCGGTTCATTCAGGCACCTTAGGGATGTACATGCCGTGGG CCTTTTCTGCAGAAGAACCAGCACGGAATGAGCAAGCAATGGAGTCTGTTTTGAAGGAGG TTGACGAGAAGTTCTGTCGCTGTCCCTACGGAGCAGCAGGGAAAGAAGTCGGGTACCAGA GTTCTGGTACTTGCCTCGACTTTGTGTATGACAAGCTAAAGACGCCCTTGTCGTTTGCGG TAGAGGTGTGCAACTTGCCGAGGGCCTCCGATTTTCACTTCAAGTCAAACATCGTCAGAT TTACGCCCACCCCAACAGACAAGCTGAGCTCCATAAAGCATGGAAGAAGGAAATCAAGTT TTTGGATCCCCACTCAGACTTCAGTGGATTAGGACACCCACGGCGCACGCGCATCGGCAA AGGACCGCATTTTGCCATAATGCCGGAGCCAGCAGATGCTTACAATGAATGCTTTGAGCA ATTTAATCCGAATAGCGAAGAAGACTTTTCTTCCACGCTAATGAACTGGAGCGAGGTAAC GGATTGACCTTGCAACGCAAGGAGATGAGATTGACTGTTGCTTCCGTT
  • Download Fasta

  • Fasta :-

    MKCVPGLAVIAGTFVAMLRASAELPHYYHTTPQLKEEVEKLGKDCDGFSVHHEPIGNDHT IEFVTVSRASGTRDRFFLLAGEHSRELISAESALHFLQVLCERETKLAEKAGKVLQHTNI QVVVNGNPVSRAKVEAGDFCLRGNENNVDLNRNWGDHWNSAAANAETSPGNKAFSEPETQ AFAKAVTSFKPHIFLSVHSGTLGMYMPWAFSAEEPARNEQAMESVLKEVDEKFCRCPYGA AGKEVGYQSSGTCLDFVYDKLKTPLSFAVEVCNLPRASDFHFKSNIVRFTPTPTDKLSSI KHGRRKSSFWIPTQTSVD

  • title: Zn binding site
  • coordinates: H83,E86,H198
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_202910299 SDKLSSIKHG0.996unspTGME49_202910299 SDKLSSIKHG0.996unspTGME49_202910299 SDKLSSIKHG0.996unspTGME49_20291070 SVSRASGTRD0.998unspTGME49_202910175 SNKAFSEPET0.994unsp

TGME49_002910      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India