TGME49_213520 | peptidase M20D, amidohydrolase

_IDPredictionOTHERSPmTPCS_Position
TGME49_213520SP0.2466350.7441640.009201CS pos: 38-39. AAS-SP. Pr: 0.3411
No Results

  • Fasta :-

    >TGME49_213520 MPRGGHKKMASKTFWNRGIIFLRSYSFFFLPLLAAAASSPASDDKYIIPDGELQNLLAVP TNLSSLSNSGSLVDFSTLFEAASETSFNAWIVAVRRALHQWPETAYNEYRTSALIHKLLK AMNVRVTTGWGTNTIGMSEEEAKIARARREGTGLVAEIGTGKEPCVALRADIDALPIFER TNVPFRSKVDGQMHACGHDVHTTMLLGAAALLKQLEPHMEGTIRLIFQPAEEGGGGALMM REEGVLTMAPPVEFIFGMHVAPALPTGELATRKGAMMAAATQFSINVKGRGGHGAVPHET IDPSPGVAAIVQGLYAIVARETSFTENTTGLISVTRIQGGTAFNVIPSEYFIGGTIRALD MAMMRNLQARVVELVENLAQAFRCQADVKYGSVSYVPLVNDPDATEFFIQTAAPASRSGR VGIADPTLGGEDFAFFLEDVPGTFAVIGIGSGAEHQLGHVPTNIPLHNPNFAVDERVLNR GAAVHAFTALRAFSFLASKKRNAGAAETRTTCEA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_213520.fa Sequence name : TGME49_213520 Sequence length : 514 VALUES OF COMPUTED PARAMETERS Coef20 : 3.744 CoefTot : 0.033 ChDiff : -5 ZoneTo : 42 KR : 6 DE : 0 CleavSite : 26 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.735 1.765 0.183 0.678 MesoH : 0.042 0.537 -0.228 0.315 MuHd_075 : 59.058 30.013 14.770 13.839 MuHd_095 : 30.688 14.128 8.881 6.572 MuHd_100 : 25.731 12.117 7.337 6.091 MuHd_105 : 24.431 10.714 5.004 6.105 Hmax_075 : 17.800 14.200 2.281 6.550 Hmax_095 : 14.700 10.800 1.454 5.430 Hmax_100 : 17.900 17.500 1.399 6.640 Hmax_105 : 6.200 16.600 -0.189 6.250 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1786 0.8214 DFMC : 0.0832 0.9168 This protein is probably imported in mitochondria. f(Ser) = 0.1429 f(Arg) = 0.0714 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 514 TGME49_213520 MPRGGHKKMASKTFWNRGIIFLRSYSFFFLPLLAAAASSPASDDKYIIPDGELQNLLAVPTNLSSLSNSGSLVDFSTLFE 80 AASETSFNAWIVAVRRALHQWPETAYNEYRTSALIHKLLKAMNVRVTTGWGTNTIGMSEEEAKIARARREGTGLVAEIGT 160 GKEPCVALRADIDALPIFERTNVPFRSKVDGQMHACGHDVHTTMLLGAAALLKQLEPHMEGTIRLIFQPAEEGGGGALMM 240 REEGVLTMAPPVEFIFGMHVAPALPTGELATRKGAMMAAATQFSINVKGRGGHGAVPHETIDPSPGVAAIVQGLYAIVAR 320 ETSFTENTTGLISVTRIQGGTAFNVIPSEYFIGGTIRALDMAMMRNLQARVVELVENLAQAFRCQADVKYGSVSYVPLVN 400 DPDATEFFIQTAAPASRSGRVGIADPTLGGEDFAFFLEDVPGTFAVIGIGSGAEHQLGHVPTNIPLHNPNFAVDERVLNR 480 GAAVHAFTALRAFSFLASKKRNAGAAETRTTCEA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_213520 3 ----MPR|GG 0.120 . TGME49_213520 7 MPRGGHK|KM 0.062 . TGME49_213520 8 PRGGHKK|MA 0.238 . TGME49_213520 12 HKKMASK|TF 0.062 . TGME49_213520 17 SKTFWNR|GI 0.095 . TGME49_213520 23 RGIIFLR|SY 0.119 . TGME49_213520 45 SPASDDK|YI 0.084 . TGME49_213520 95 AWIVAVR|RA 0.086 . TGME49_213520 96 WIVAVRR|AL 0.188 . TGME49_213520 110 TAYNEYR|TS 0.087 . TGME49_213520 117 TSALIHK|LL 0.065 . TGME49_213520 120 LIHKLLK|AM 0.063 . TGME49_213520 125 LKAMNVR|VT 0.100 . TGME49_213520 143 MSEEEAK|IA 0.080 . TGME49_213520 146 EEAKIAR|AR 0.105 . TGME49_213520 148 AKIARAR|RE 0.144 . TGME49_213520 149 KIARARR|EG 0.459 . TGME49_213520 162 AEIGTGK|EP 0.062 . TGME49_213520 169 EPCVALR|AD 0.117 . TGME49_213520 180 ALPIFER|TN 0.075 . TGME49_213520 186 RTNVPFR|SK 0.233 . TGME49_213520 188 NVPFRSK|VD 0.062 . TGME49_213520 213 GAAALLK|QL 0.077 . TGME49_213520 224 HMEGTIR|LI 0.089 . TGME49_213520 241 GGALMMR|EE 0.091 . TGME49_213520 272 TGELATR|KG 0.071 . TGME49_213520 273 GELATRK|GA 0.108 . TGME49_213520 288 QFSINVK|GR 0.080 . TGME49_213520 290 SINVKGR|GG 0.191 . TGME49_213520 320 LYAIVAR|ET 0.138 . TGME49_213520 336 GLISVTR|IQ 0.099 . TGME49_213520 357 FIGGTIR|AL 0.103 . TGME49_213520 365 LDMAMMR|NL 0.085 . TGME49_213520 370 MRNLQAR|VV 0.306 . TGME49_213520 383 NLAQAFR|CQ 0.088 . TGME49_213520 389 RCQADVK|YG 0.068 . TGME49_213520 417 TAAPASR|SG 0.154 . TGME49_213520 420 PASRSGR|VG 0.266 . TGME49_213520 476 NFAVDER|VL 0.083 . TGME49_213520 480 DERVLNR|GA 0.111 . TGME49_213520 491 HAFTALR|AF 0.075 . TGME49_213520 499 FSFLASK|KR 0.056 . TGME49_213520 500 SFLASKK|RN 0.088 . TGME49_213520 501 FLASKKR|NA 0.449 . TGME49_213520 509 AGAAETR|TT 0.100 . ____________________________^_________________

  • Fasta :-

    >TGME49_213520 GGCTTCGGCAGACCCGCACCGAAGGCTATGTTACCGTGGAGCTCGAAATGTTCTATCAAG AGTATCATGTATCACTGGAACGCTCTTGTTTGCCACTGACAGAAGCTCATCACGCATAGG TTGTGTGCCAAAACACTGGGATGTAAAGGACTTTCTTTGCCTCCACAGTGCTGCTCTGGT TCACCCAGCGACTGTCTGTAGACCGCCGCGATGAAACATCACTTTTAGAAGTATCTGTCC TAAAACTCAGCATGCAGGCGAAAAATACGCCTGCCATGGGTATGTTTTAGACATTTACGC GAAAATTCTTCGTTAACACCACGCCATAGTGGTGTGAGATCCTGCCTGCAGCACCTGCAA CTTTCGACGTTCTAGCCGCATCATTTCCATGACGGGCAACTACGATCGATACGCTGGCGC TAACACTTTACCTACCAGCCTTTCAATTTTGCTGTTGAGTGTGTGTCTATGTTAACAACT TACTAGGATGCATCTGTGGTGGACCGATACAGTGGGAGGTAACGCATTCGGCATCATAGC CTTATTTCGACCTCCGGTTAGGTGGATTGGTGTGCTACCAGATTGCAGGCGGGTAGCCAT GTCATAGCGCATGCGGGATTGATTGTGTCTCGCGAAAGAAATATAGTGCACTGGATCTTG AGCTTCAGTTACAGAAACAAAGCATCGTGTTTTGAATGCGTCATTTTTTCAGTAACTTCT GAGTGATATTGCTGCTCGCTTTTGTTTTCCTCCTTTCTCTTCGTGTCCACTTGAAGTCAG CGCGCCAGTGAGCCCTGTACCAGTGGAGGGAAACCCATGCCCCGCGGCGGCCACAAGAAA ATGGCTTCGAAAACCTTTTGGAATCGAGGAATCATCTTTTTACGTTCATATTCTTTCTTT TTCCTTCCTCTGCTGGCGGCAGCCGCTAGTTCACCTGCAAGTGACGACAAATATATCATC CCGGACGGCGAGCTCCAGAACCTCCTTGCGGTGCCAACGAATCTGAGCTCTCTGTCGAAC TCTGGATCTCTTGTCGACTTCTCCACGCTCTTTGAAGCAGCCAGTGAAACTTCTTTCAAT GCATGGATCGTGGCTGTCCGTCGAGCTCTTCACCAGTGGCCAGAAACAGCGTACAATGAG TACAGGACCTCTGCACTGATTCACAAGCTTCTTAAGGCGATGAACGTTCGGGTCACAACA GGATGGGGCACGAATACAATTGGCATGAGCGAAGAAGAAGCGAAAATTGCACGGGCGCGA CGGGAAGGAACGGGACTGGTTGCGGAAATCGGAACAGGGAAGGAACCTTGTGTTGCGCTG CGAGCTGATATCGACGCTCTTCCTATCTTCGAACGGACTAACGTTCCTTTCCGGTCCAAA GTTGACGGGCAAATGCATGCATGTGGCCACGACGTTCATACCACGATGCTTCTGGGAGCA GCGGCGCTGCTTAAGCAGCTGGAGCCCCACATGGAGGGAACGATTCGACTTATCTTCCAA CCTGCCGAGGAAGGCGGAGGCGGGGCGCTCATGATGAGAGAAGAGGGTGTTCTGACTATG GCACCACCCGTAGAATTCATTTTCGGGATGCATGTCGCCCCGGCATTACCCACAGGGGAA TTGGCGACAAGAAAAGGTGCCATGATGGCCGCCGCAACACAATTCTCAATCAATGTGAAG GGACGAGGTGGCCATGGCGCCGTGCCGCATGAAACCATCGACCCGAGTCCAGGCGTAGCA GCGATCGTTCAGGGATTATACGCAATCGTGGCGCGGGAAACGTCGTTCACGGAAAACACT ACCGGTCTTATCTCTGTCACCCGGATCCAGGGAGGAACAGCATTCAACGTGATACCATCT GAATACTTCATTGGAGGAACGATCCGGGCCTTGGACATGGCGATGATGCGGAACCTACAG GCTAGAGTTGTAGAACTCGTGGAGAATTTGGCCCAGGCGTTCAGATGTCAAGCTGACGTC AAATATGGGTCCGTCAGCTACGTACCTCTTGTCAATGACCCAGACGCGACAGAGTTCTTC ATCCAGACCGCGGCACCGGCGTCGCGGAGCGGAAGGGTGGGGATAGCGGACCCGACGCTG GGAGGAGAAGATTTCGCATTTTTCCTCGAAGACGTTCCCGGTACATTTGCAGTGATTGGC ATCGGCAGTGGAGCTGAACACCAGCTAGGCCATGTCCCTACAAACATTCCCCTCCACAAC CCCAACTTCGCTGTCGATGAACGAGTGTTGAACCGCGGAGCTGCTGTGCACGCGTTCACT GCACTGAGGGCCTTTTCGTTCTTGGCTAGCAAGAAACGTAATGCTGGGGCCGCGGAAACA CGTACGACCTGTGAAGCCTAGCGGATATCGGGGCTGCTGCCCTCGGACGACACCAGTTGA ACGTGAATGCGGGAACCGGTGAAGTGAAAGGACGGGTTCGAGGAGTGCCCTCTCTCGACG AGAAACGAACGGAAAAAGAAGACATATTCAGGCTCCTACCGCAGATCGAATACGGCTTGT CCTCCCAGCGTTTATGCTGCTGCCGCGGTCGTTTTTTCTCAGTCATTGCTCAGGCGTAGG TAGTGTGTACAGTCTCTACGGGAGCAGCGAAGGGCTGGTGGAGGATAACCTTGGCATTTC CAAAAAGAGCATTCCCAGACCATGGTGTAGATAAATGTTTATAGCTTGTCCACATTTGCG CGGAGAGACAACCGATGTAAATTGTAGCATTCAGTTTCTTCCCGAGGTTAGTTTCTGTTG CCCCGATCGCTCCGCTTTCCACGATTTCAGTCTTTCCATGAATTGCCCGTCTGCGAGTCT TTTGACAAGCGGACTCCTACCGGTTCTTTTACACCGGAATGGCCATACACACGTGTCATA AACGTGTCAAATATGGGACTAACGGATTTTTCCAGCAGTTTCTGGTTTACTTTGGTGTGA TCTTATACACGTGCGTCAATGTGAGAACAAGAGAGTTGCTCATAAAACTCCGACTGCACA AAACGGTGTGCTATTTCTACTAACTTCTTGATCTACGTGAGCTGAACACTATCGAGCTCT GGGAATTGCATGGGTCAAGTGCGTGAAGTGAGAATCATGTATTCAATATAAAATTCGTCT CGTCGACTAATCCACTTTTTTATCGTCTATTCTGGAGAGCTTTGCAAGCTCATGGATTAA CTGAATGCCCCGAAGTACTTGCGAAGTGACGATTCCGACTTCGAAGATTCATTTCCGGTG ATATTCGCGGTACCAGAATTTCAGTGCTCGCCAGCATTGGACACTGCATTGTGCCAGTTG AAAAGATGAAATCTGTCGGTCTCCGGCATCATGCGGTGGGGAAGCCTCTTCAAGTTCACA TGTAGATGGTGTGGATGGGGCATCGTTTCAACTGCGATCAGCAAGGGAAACAGCTCGAAT GAATTTGTGCCAGATGCC
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  • Fasta :-

    MPRGGHKKMASKTFWNRGIIFLRSYSFFFLPLLAAAASSPASDDKYIIPDGELQNLLAVP TNLSSLSNSGSLVDFSTLFEAASETSFNAWIVAVRRALHQWPETAYNEYRTSALIHKLLK AMNVRVTTGWGTNTIGMSEEEAKIARARREGTGLVAEIGTGKEPCVALRADIDALPIFER TNVPFRSKVDGQMHACGHDVHTTMLLGAAALLKQLEPHMEGTIRLIFQPAEEGGGGALMM REEGVLTMAPPVEFIFGMHVAPALPTGELATRKGAMMAAATQFSINVKGRGGHGAVPHET IDPSPGVAAIVQGLYAIVARETSFTENTTGLISVTRIQGGTAFNVIPSEYFIGGTIRALD MAMMRNLQARVVELVENLAQAFRCQADVKYGSVSYVPLVNDPDATEFFIQTAAPASRSGR VGIADPTLGGEDFAFFLEDVPGTFAVIGIGSGAEHQLGHVPTNIPLHNPNFAVDERVLNR GAAVHAFTALRAFSFLASKKRNAGAAETRTTCEA

    No Results
  • title: metal binding site
  • coordinates: C196,H198,E232,H259,H467
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_21352046 YSDDKYIIPD0.992unspTGME49_213520138 STIGMSEEEA0.995unsp

TGME49_013520      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India