TGME49_216450 | peptidase, T1 family protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_216450OTHER0.9999150.0000750.000010
No Results

  • Fasta :-

    >TGME49_216450 MAGTGSGYDLSVSTFSPDGRVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEKPKPSPLLL PTCLRRIAAVTETIGIAVAGLAADGRQIVTRARQEAEEYKKTFGVEISGGVLAERIGLFM HAYSLYWSVRPFGASVLIGAVQQERSEPGAPLQFKSELYCVETSGCCSKYRATALGKGRP SAKTELEKLNLETLTTKEALEALTKIFLVVDDEGSKEGKVEVEVGLIGKDSCGVFKMLPS EEVRAAVKRAREALDEMDED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_216450.fa Sequence name : TGME49_216450 Sequence length : 260 VALUES OF COMPUTED PARAMETERS Coef20 : 3.457 CoefTot : -0.654 ChDiff : -6 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.812 0.304 0.667 MesoH : -0.344 0.636 -0.211 0.257 MuHd_075 : 24.042 13.670 5.256 3.340 MuHd_095 : 8.604 4.132 2.025 1.396 MuHd_100 : 3.994 5.301 0.524 1.343 MuHd_105 : 4.038 4.615 1.041 1.078 Hmax_075 : 14.817 7.700 1.335 3.722 Hmax_095 : 11.800 5.700 0.880 3.450 Hmax_100 : 11.800 5.700 0.856 3.450 Hmax_105 : 8.167 5.500 0.380 3.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9853 0.0147 DFMC : 0.9794 0.0206
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 260 TGME49_216450 MAGTGSGYDLSVSTFSPDGRVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEKPKPSPLLLPTCLRRIAAVTETIGIAVAG 80 LAADGRQIVTRARQEAEEYKKTFGVEISGGVLAERIGLFMHAYSLYWSVRPFGASVLIGAVQQERSEPGAPLQFKSELYC 160 VETSGCCSKYRATALGKGRPSAKTELEKLNLETLTTKEALEALTKIFLVVDDEGSKEGKVEVEVGLIGKDSCGVFKMLPS 240 EEVRAAVKRAREALDEMDED 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_216450 20 TFSPDGR|VF 0.098 . TGME49_216450 29 QVEYAGK|AV 0.086 . TGME49_216450 52 ILFAVEK|PK 0.058 . TGME49_216450 54 FAVEKPK|PS 0.067 . TGME49_216450 65 LLPTCLR|RI 0.089 . TGME49_216450 66 LPTCLRR|IA 0.147 . TGME49_216450 86 GLAADGR|QI 0.101 . TGME49_216450 91 GRQIVTR|AR 0.140 . TGME49_216450 93 QIVTRAR|QE 0.079 . TGME49_216450 100 QEAEEYK|KT 0.079 . TGME49_216450 101 EAEEYKK|TF 0.110 . TGME49_216450 115 GGVLAER|IG 0.067 . TGME49_216450 130 SLYWSVR|PF 0.135 . TGME49_216450 145 GAVQQER|SE 0.113 . TGME49_216450 155 GAPLQFK|SE 0.079 . TGME49_216450 169 TSGCCSK|YR 0.078 . TGME49_216450 171 GCCSKYR|AT 0.104 . TGME49_216450 177 RATALGK|GR 0.059 . TGME49_216450 179 TALGKGR|PS 0.097 . TGME49_216450 183 KGRPSAK|TE 0.068 . TGME49_216450 188 AKTELEK|LN 0.061 . TGME49_216450 197 LETLTTK|EA 0.063 . TGME49_216450 205 ALEALTK|IF 0.059 . TGME49_216450 216 VDDEGSK|EG 0.052 . TGME49_216450 219 EGSKEGK|VE 0.063 . TGME49_216450 229 EVGLIGK|DS 0.077 . TGME49_216450 236 DSCGVFK|ML 0.070 . TGME49_216450 244 LPSEEVR|AA 0.111 . TGME49_216450 248 EVRAAVK|RA 0.072 . TGME49_216450 249 VRAAVKR|AR 0.281 . TGME49_216450 251 AAVKRAR|EA 0.126 . ____________________________^_________________

  • Fasta :-

    >TGME49_216450 CTCGTCTTGCTCGACAAAACACACGTAAAAAGCTCTTCCTTCTTCCACAACACAGAAGAA GAATGGTTTCTCAGAGTGAAAGTTGCTTGGAGTCTGTACGACGTGGACTGGAAAAACTCG TGTGAGAGTGTGTGTGCGTGGACAACCCACTTTTCTGCCCTTGTGCGTCTTCTGCTTCTA TTCGCCTGTCTCCTTCCACAGTTATTGTCTTTTCTTGCGCCCGGGAGGGCTTTTCTCTCA TTTTCGTTTTTCCTGGTAGATCTCGGTGGCATCCTCCTTCAGGACTGCGTCTCTGCTGCC ACCTGTTTCTCTAGAGAACAGTGACCTCGTTAGAAACAGGGCCGCGGCCGTCGCCTCCAG TCGACATTCCCACTTTTGCAGCGGCCGGTTGACAGCATTCCATGTCATTTCCCGCCCGTG TTGCCCCTCGTCGTCTACATACGTTTCGGAACTCTTTTAACTCCTGCTGTCGAGCGTTTT CGCGAGCAACAGTGTCTGTCTTCGCAAAAGTACAACTAGAGAGGACTGGGGACATTGTCT CGTGCCGCACACCGTTGCGCAGTTCTGCAACACTTTCTCTCAGTTTCTCACGCCCCTTTT TTTTCGCACACAAACCGAAGAACTACATGTCTGTGGTAGTTCGTTCTACATCGCCTTGTC TTCGCTAAACTGCAGTGTGGCAAACACTCGCGGTCTGTCCGGCACACTGACGATATCCTC AACAACCATTTTATTCTTTCACTGATCCTCCCTCCACCATGGCTGGTACTGGATCTGGAT ACGACCTTTCCGTCTCCACCTTTTCTCCGGATGGACGCGTTTTCCAGGTGGAGTACGCAG GCAAGGCGGTAGACAACAGCGGTCTGTGCATGGCTGTTGTGTGCCAAGATGGAATTCTTT TTGCCGTCGAAAAGCCCAAGCCATCTCCGCTTCTCCTTCCTACTTGCCTCCGAAGAATCG CCGCTGTGACAGAAACGATCGGCATCGCAGTGGCGGGGCTGGCGGCAGACGGCCGACAGA TCGTCACGCGCGCGCGCCAAGAGGCCGAAGAATACAAAAAGACGTTCGGAGTCGAAATCA GTGGCGGCGTTCTGGCGGAACGCATTGGGCTCTTCATGCATGCCTACTCTCTCTACTGGA GTGTGCGGCCGTTTGGAGCCTCCGTCCTCATTGGCGCGGTCCAGCAGGAGAGAAGCGAAC CTGGTGCGCCTCTCCAGTTCAAGAGCGAGCTCTACTGCGTAGAAACGAGTGGGTGCTGCA GCAAGTACCGGGCAACTGCTTTAGGAAAGGGCCGCCCATCGGCAAAGACAGAGCTCGAGA AACTGAACTTGGAGACACTGACGACGAAGGAGGCCCTGGAGGCTCTCACCAAAATCTTCC TGGTTGTTGACGATGAGGGCAGCAAGGAAGGGAAAGTTGAAGTTGAAGTCGGTCTGATTG GAAAAGACAGCTGCGGAGTCTTCAAGATGCTGCCGTCTGAAGAGGTTCGTGCCGCCGTCA AGCGCGCGCGAGAGGCTCTCGACGAAATGGATGAAGACTAAGTTGGAAGAGGGGCGGAGA GCCGAGGTCAGAGCCAAGGGGTCGTCGTCGTGATTACAACAGAGGAAGCACCAGCAGATG TGGACGAGAGGGTAGGGGCAGGGTGAGGTGGAGACAGACGGTCGAGTGGAGCTTTAAATA CAGCCCAGCAACGAAGAACTAGACAGAGAAAGGTCCGGAAGACGACCAGAGAAAAACCTA AGCCGAAATCCGTCCCTCGTCACCTTGCTTTTGCACAGCGCCTGCGCCTGCTGTAGTTTT GCGTGGAAGAGACGGAAGAAACTGCAAAGCGGAGATGCTTCCGTTCAGCTTGCTTTCTGT CGACGCATTCTCCAGAAGGAAAAGATCTGTAAAGAATCAAAACAGAGGAACTCATGCAGG AAGGGTTGGCAGCAAGCAAAACATTGCCTATGAACACAACTCATGCACGAGACGTGGCTC CTCGGTCATATCCATTCTGCTGTCACAAAAAGCGTCTTTTGTGCCGTGGGCAGAAACAGT TGTACAAGAGCCAACGGTCTGAAGTGAGACTGCATCATGTAATCACTGCTTTCGCATTTC CTTTTTTCCGAAGAGATAAAAAACACACGACACCCGTTGTACTGGCGCTGCTTAGCCAAT CC
  • Download Fasta

  • Fasta :-

    MAGTGSGYDLSVSTFSPDGRVFQVEYAGKAVDNSGLCMAVVCQDGILFAVEKPKPSPLLL PTCLRRIAAVTETIGIAVAGLAADGRQIVTRARQEAEEYKKTFGVEISGGVLAERIGLFM HAYSLYWSVRPFGASVLIGAVQQERSEPGAPLQFKSELYCVETSGCCSKYRATALGKGRP SAKTELEKLNLETLTTKEALEALTKIFLVVDDEGSKEGKVEVEVGLIGKDSCGVFKMLPS EEVRAAVKRAREALDEMDED

  • title: active site
  • coordinates: G35,E51,P53,R66
No Results
No Results
IDSitePeptideScoreMethod
TGME49_216450181 SKGRPSAKTE0.995unsp

TGME49_016450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India