TGME49_221170 | CAAX metallo endopeptidase

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_221170OTHER0.8790380.1191890.001773
No Results

  • Fasta :-

    >TGME49_221170 MGLEALPHWFSNVPWLHVYLGFSVSVECFEQYLNARQLRRYDEAKPPEKLAHLVTEEEYA KTNAYNKDKMRFGIFSSLFQTSISLLSTACFLGPFLWRLAGNLVGKNSNEYSQSLADLAL SAVIGECISTPFQLYADFVVEEKHGFNKKTLGIFVKDKLLSLGLTGLIGGPLACAAIWLI KWGGKSFYLWLWGFSVATTIALMFVYPNFIAPLFNKFEPLKDEELRGKICELAKKLDFPL TQLYEMDNSKRSGHSNAYFYGFWWSKRIVLYDTLLHLPHDQILAILGHEMGHWKRSHTTK MMAATFLQLFCTFYLFGLVMTSDALFDSFGYTDTRASVVGLKLFSNIFLPVNTLISLLMT MYSRKNEFEADAFACELGYSESLKQGLIAIHTENKACLDPDPWFSFWHYSHPPLLERLRA IEAIEEKQSKKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_221170.fa Sequence name : TGME49_221170 Sequence length : 432 VALUES OF COMPUTED PARAMETERS Coef20 : 3.469 CoefTot : -1.043 ChDiff : -1 ZoneTo : 26 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.265 1.894 0.417 0.769 MesoH : 0.721 0.972 -0.099 0.497 MuHd_075 : 19.724 12.814 6.025 4.414 MuHd_095 : 21.084 16.790 6.808 4.430 MuHd_100 : 19.764 20.067 6.287 4.618 MuHd_105 : 19.341 20.893 6.189 5.243 Hmax_075 : 16.200 14.300 1.569 5.750 Hmax_095 : 12.250 11.900 1.341 5.075 Hmax_100 : 13.600 14.300 0.377 6.010 Hmax_105 : 19.400 21.300 2.765 7.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9498 0.0502 DFMC : 0.9576 0.0424
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 432 TGME49_221170 MGLEALPHWFSNVPWLHVYLGFSVSVECFEQYLNARQLRRYDEAKPPEKLAHLVTEEEYAKTNAYNKDKMRFGIFSSLFQ 80 TSISLLSTACFLGPFLWRLAGNLVGKNSNEYSQSLADLALSAVIGECISTPFQLYADFVVEEKHGFNKKTLGIFVKDKLL 160 SLGLTGLIGGPLACAAIWLIKWGGKSFYLWLWGFSVATTIALMFVYPNFIAPLFNKFEPLKDEELRGKICELAKKLDFPL 240 TQLYEMDNSKRSGHSNAYFYGFWWSKRIVLYDTLLHLPHDQILAILGHEMGHWKRSHTTKMMAATFLQLFCTFYLFGLVM 320 TSDALFDSFGYTDTRASVVGLKLFSNIFLPVNTLISLLMTMYSRKNEFEADAFACELGYSESLKQGLIAIHTENKACLDP 400 DPWFSFWHYSHPPLLERLRAIEAIEEKQSKKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_221170 36 EQYLNAR|QL 0.090 . TGME49_221170 39 LNARQLR|RY 0.315 . TGME49_221170 40 NARQLRR|YD 0.200 . TGME49_221170 45 RRYDEAK|PP 0.082 . TGME49_221170 49 EAKPPEK|LA 0.064 . TGME49_221170 61 TEEEYAK|TN 0.059 . TGME49_221170 67 KTNAYNK|DK 0.070 . TGME49_221170 69 NAYNKDK|MR 0.077 . TGME49_221170 71 YNKDKMR|FG 0.091 . TGME49_221170 98 LGPFLWR|LA 0.093 . TGME49_221170 106 AGNLVGK|NS 0.065 . TGME49_221170 143 DFVVEEK|HG 0.057 . TGME49_221170 148 EKHGFNK|KT 0.067 . TGME49_221170 149 KHGFNKK|TL 0.127 . TGME49_221170 156 TLGIFVK|DK 0.074 . TGME49_221170 158 GIFVKDK|LL 0.083 . TGME49_221170 181 AAIWLIK|WG 0.068 . TGME49_221170 185 LIKWGGK|SF 0.079 . TGME49_221170 216 IAPLFNK|FE 0.057 . TGME49_221170 221 NKFEPLK|DE 0.065 . TGME49_221170 226 LKDEELR|GK 0.091 . TGME49_221170 228 DEELRGK|IC 0.060 . TGME49_221170 234 KICELAK|KL 0.067 . TGME49_221170 235 ICELAKK|LD 0.074 . TGME49_221170 250 YEMDNSK|RS 0.066 . TGME49_221170 251 EMDNSKR|SG 0.217 . TGME49_221170 266 YGFWWSK|RI 0.055 . TGME49_221170 267 GFWWSKR|IV 0.185 . TGME49_221170 294 HEMGHWK|RS 0.068 . TGME49_221170 295 EMGHWKR|SH 0.358 . TGME49_221170 300 KRSHTTK|MM 0.105 . TGME49_221170 335 FGYTDTR|AS 0.084 . TGME49_221170 342 ASVVGLK|LF 0.061 . TGME49_221170 364 LMTMYSR|KN 0.077 . TGME49_221170 365 MTMYSRK|NE 0.079 . TGME49_221170 384 GYSESLK|QG 0.086 . TGME49_221170 395 AIHTENK|AC 0.062 . TGME49_221170 417 HPPLLER|LR 0.067 . TGME49_221170 419 PLLERLR|AI 0.112 . TGME49_221170 427 IEAIEEK|QS 0.062 . TGME49_221170 430 IEEKQSK|KN 0.066 . TGME49_221170 431 EEKQSKK|N- 0.099 . ____________________________^_________________

  • Fasta :-

    >TGME49_221170 CGACGAGAAACGATCCGACGGATGGGAAGGCGTGTGTGTCGGGCGAAAGCCGGAGAAACG CTGGATTTTCGCTTTACAACCACAGAAGAAAGGACAGCGCTCTTCTTTCTTGTCACATCT CTTCGTTCTCTCGATTTAGAACCGCCCCCGAAAACCTTCTCCCCAGTGTGCGCCGTCCAC GGGTGTCTGATTTTTGCTGTTCCCTTCGCTGTCGAGGCGGGCTGGTCCTCTAATCTCTGT GCACAGGCTTTCGTGCTTTTTCTGTCGCCTTCCTTGCGTTTTCTCGCCTTTCTCTGTTTG GAGTTCCGTAATTCCCGTCATAACCGCCACGCATGCCCTTCCCCCTCTGCACATGTATCT CCTCGACGACTGCGAGAGTGTCTTGCTGCTGCTGCGGCTCGCTCTTTCCCCGTTTCTCCC GCGGCACTTTTCCAAATCCGCCGTCAAATCCGTCTCCTTTTCTTCCTCCCTCTCCGTCCA CCTTTTCTTGTGTCTCGTTGGTCTGTCTTCGACTTTTCTGTCGGCCTTTTTGTGGCGCCG CTGCTGCTGTCCACCTGGCAGGCGCCTCCCTGTCGGCCCGTTTCTCTGTGTTTGCCGTTC CTGTTCCTCTCGTCTTTGAGCGTTTCTCCGTTTTTCGTTCCGCAAAATGGGGCTCGAGGC TCTTCCTCACTGGTTCTCGAATGTGCCTTGGCTGCATGTGTATCTGGGCTTCTCTGTCTC TGTCGAGTGCTTCGAGCAGTACCTGAATGCGCGGCAACTGCGGCGCTACGACGAGGCGAA GCCTCCGGAAAAGCTGGCGCATCTGGTCACGGAAGAGGAGTATGCGAAGACCAACGCGTA CAACAAGGACAAGATGCGCTTCGGCATCTTTTCTTCTCTGTTCCAGACCTCGATCTCGCT CCTCTCCACGGCATGCTTCCTCGGGCCTTTCCTGTGGCGGCTGGCGGGGAACCTGGTGGG GAAGAACAGCAACGAGTACTCCCAGTCGCTCGCCGATCTGGCTCTCAGCGCCGTGATCGG AGAGTGCATCTCCACGCCCTTCCAGCTGTACGCGGACTTTGTTGTCGAGGAGAAACATGG ATTCAACAAGAAAACGCTCGGCATCTTCGTCAAAGATAAACTCCTCAGTCTCGGTCTCAC GGGTCTCATCGGCGGTCCGCTTGCATGCGCCGCCATCTGGCTCATCAAATGGGGTGGAAA ATCTTTCTACCTCTGGCTCTGGGGCTTCTCTGTGGCCACAACAATTGCCCTGATGTTCGT TTACCCCAATTTCATTGCGCCGCTCTTCAACAAATTCGAGCCACTCAAGGACGAAGAACT CCGCGGAAAAATCTGCGAGTTGGCGAAGAAACTGGACTTCCCACTCACTCAACTGTATGA GATGGACAACTCGAAGCGGTCTGGCCATAGCAACGCGTATTTCTACGGTTTCTGGTGGTC GAAAAGAATCGTCCTCTACGATACGCTCCTCCACTTGCCTCACGACCAGATTCTCGCGAT TCTTGGTCACGAGATGGGGCACTGGAAGAGAAGTCACACGACCAAGATGATGGCGGCGAC TTTCCTTCAGCTCTTCTGCACTTTCTATCTCTTTGGCCTAGTGATGACCAGCGACGCGCT CTTCGACAGCTTTGGATACACAGACACCCGCGCTTCTGTCGTCGGTCTCAAGCTCTTCAG CAACATCTTTCTCCCCGTCAATACGTTGATTTCTCTGCTGATGACAATGTACTCCCGCAA AAACGAGTTCGAAGCGGACGCATTTGCTTGCGAACTGGGCTACAGCGAATCTCTCAAGCA AGGCCTTATCGCCATTCACACAGAAAACAAAGCCTGCCTGGACCCAGACCCCTGGTTCTC CTTTTGGCACTACAGCCACCCGCCGCTGCTGGAGCGTCTGCGGGCGATCGAAGCAATCGA AGAGAAACAATCGAAGAAGAATTAGTTGCCTGATAACGACAGGCGCAGGATTTGTGCCCT GTGCAGCTTTCCCTCCATTCTTTGTTTGAAAAGAAAAACCGACTGAAGCGACTTTCTTCG CAGTCTCTGAAAAACAGGAACATCACTGTTTGAATTCCTTGTTCCTGTCTCGGCCCAGAC GTCAAAGACTCAATTTAGTGCATGCGGTCGCTGCATACGCAGAGGCTCTGTCCAGATGGA GACAGAAGCTGCTCGTGAGCAGACTTCTCCTGGCGATGCTTTCTCGAACATGCTTCCCCT AGATCACAGTCTCGATCTTCGCGCC
  • Download Fasta

  • Fasta :-

    MGLEALPHWFSNVPWLHVYLGFSVSVECFEQYLNARQLRRYDEAKPPEKLAHLVTEEEYA KTNAYNKDKMRFGIFSSLFQTSISLLSTACFLGPFLWRLAGNLVGKNSNEYSQSLADLAL SAVIGECISTPFQLYADFVVEEKHGFNKKTLGIFVKDKLLSLGLTGLIGGPLACAAIWLI KWGGKSFYLWLWGFSVATTIALMFVYPNFIAPLFNKFEPLKDEELRGKICELAKKLDFPL TQLYEMDNSKRSGHSNAYFYGFWWSKRIVLYDTLLHLPHDQILAILGHEMGHWKRSHTTK MMAATFLQLFCTFYLFGLVMTSDALFDSFGYTDTRASVVGLKLFSNIFLPVNTLISLLMT MYSRKNEFEADAFACELGYSESLKQGLIAIHTENKACLDPDPWFSFWHYSHPPLLERLRA IEAIEEKQSKKN

    No Results
  • title: Zn binding site
  • coordinates: H288,H292,E367,H411
No Results
No Results
IDSitePeptideScoreMethod
TGME49_221170337 SDTRASVVGL0.995unsp

TGME49_021170      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India