TGME49_226420 | peptidase family M3 protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_226420SP0.4282270.5301940.041579CS pos: 49-50. CSG-EI. Pr: 0.5410
No Results

  • Fasta :-

    >TGME49_226420 MISPVASVFSTMPHWKQGARLHAPGGRFTFAARIYLFLLLSCLGFSCSGEIANGKGTDTT PARLDPRTLPRYNLKRHFPYSSIFDPAIDRDIEALSRRAREFKERFKGTLETTLLEALIK HEQLDEAVDFVDYYIALVAAVNTTNEEIRKRVNQLESAIAADVQPYRLFVNLELGAMPEA ALQKQMAANGNLSFYSGFLGAARRRAPYVLSEDVERALLVRKPMTVQVATEYYFKQLGDA TFDMNGEKLILSMILAFIMDNSQEKRWAAQKAVKQGLERHKITNFAALSLNVVAGSWHME RKERGYERLRSSRNVANNVSDKTIDALIHAGETVAVSLTKRYFKLKKKILKNRAGVEVFD FADRLAPLPLKSSDRLYDWKESTRIVRDAYKSFSPTMALMFDKLLEEERIDAPAVPGKRT PACYLGTPTTGPFIILEHVGQPRCVETLAHEAGHAIHSMLSYEQGNLQLAPPLTIAEMAS LMGERIVFNDLLRRTTDPEERLSHLLRYLDGWTSTVTRQLMFDDFERRVHDARAQGTIPD GAFTTMWKESLEKYFGAEGEVFDSYANSEADWARIPHFHNTPFYVYAYAFSDLAVGSLYR VYKAHPEGFEQKYLDILRSGNKKSFEEIMKPFGLNPSAETFWADAVEATGGTVIDEAESL ALKLGFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_226420.fa Sequence name : TGME49_226420 Sequence length : 667 VALUES OF COMPUTED PARAMETERS Coef20 : 4.080 CoefTot : -0.398 ChDiff : -1 ZoneTo : 49 KR : 4 DE : 0 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.512 1.782 0.373 0.599 MesoH : -0.224 0.231 -0.313 0.240 MuHd_075 : 18.896 8.659 5.219 5.061 MuHd_095 : 28.678 11.593 6.053 5.964 MuHd_100 : 33.743 17.564 6.773 7.189 MuHd_105 : 38.446 22.665 8.809 8.298 Hmax_075 : 13.900 3.325 2.281 6.020 Hmax_095 : 7.800 9.500 -0.260 2.984 Hmax_100 : 8.300 15.600 -0.260 2.720 Hmax_105 : 13.650 18.500 2.221 4.282 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5379 0.4621 DFMC : 0.4983 0.5017 This protein is probably imported in mitochondria. f(Ser) = 0.1224 f(Arg) = 0.0612 CMi = 0.78637 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 667 TGME49_226420 MISPVASVFSTMPHWKQGARLHAPGGRFTFAARIYLFLLLSCLGFSCSGEIANGKGTDTTPARLDPRTLPRYNLKRHFPY 80 SSIFDPAIDRDIEALSRRAREFKERFKGTLETTLLEALIKHEQLDEAVDFVDYYIALVAAVNTTNEEIRKRVNQLESAIA 160 ADVQPYRLFVNLELGAMPEAALQKQMAANGNLSFYSGFLGAARRRAPYVLSEDVERALLVRKPMTVQVATEYYFKQLGDA 240 TFDMNGEKLILSMILAFIMDNSQEKRWAAQKAVKQGLERHKITNFAALSLNVVAGSWHMERKERGYERLRSSRNVANNVS 320 DKTIDALIHAGETVAVSLTKRYFKLKKKILKNRAGVEVFDFADRLAPLPLKSSDRLYDWKESTRIVRDAYKSFSPTMALM 400 FDKLLEEERIDAPAVPGKRTPACYLGTPTTGPFIILEHVGQPRCVETLAHEAGHAIHSMLSYEQGNLQLAPPLTIAEMAS 480 LMGERIVFNDLLRRTTDPEERLSHLLRYLDGWTSTVTRQLMFDDFERRVHDARAQGTIPDGAFTTMWKESLEKYFGAEGE 560 VFDSYANSEADWARIPHFHNTPFYVYAYAFSDLAVGSLYRVYKAHPEGFEQKYLDILRSGNKKSFEEIMKPFGLNPSAET 640 FWADAVEATGGTVIDEAESLALKLGFV 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_226420 16 STMPHWK|QG 0.061 . TGME49_226420 20 HWKQGAR|LH 0.091 . TGME49_226420 27 LHAPGGR|FT 0.124 . TGME49_226420 33 RFTFAAR|IY 0.074 . TGME49_226420 55 GEIANGK|GT 0.070 . TGME49_226420 63 TDTTPAR|LD 0.083 . TGME49_226420 67 PARLDPR|TL 0.075 . TGME49_226420 71 DPRTLPR|YN 0.090 . TGME49_226420 75 LPRYNLK|RH 0.064 . TGME49_226420 76 PRYNLKR|HF 0.151 . TGME49_226420 90 FDPAIDR|DI 0.091 . TGME49_226420 97 DIEALSR|RA 0.071 . TGME49_226420 98 IEALSRR|AR 0.179 . TGME49_226420 100 ALSRRAR|EF 0.367 . TGME49_226420 103 RRAREFK|ER 0.220 . TGME49_226420 105 AREFKER|FK 0.207 . TGME49_226420 107 EFKERFK|GT 0.058 . TGME49_226420 120 LLEALIK|HE 0.060 . TGME49_226420 149 TTNEEIR|KR 0.095 . TGME49_226420 150 TNEEIRK|RV 0.130 . TGME49_226420 151 NEEIRKR|VN 0.104 . TGME49_226420 167 ADVQPYR|LF 0.079 . TGME49_226420 184 PEAALQK|QM 0.065 . TGME49_226420 203 GFLGAAR|RR 0.071 . TGME49_226420 204 FLGAARR|RA 0.129 . TGME49_226420 205 LGAARRR|AP 0.111 . TGME49_226420 216 LSEDVER|AL 0.087 . TGME49_226420 221 ERALLVR|KP 0.095 . TGME49_226420 222 RALLVRK|PM 0.082 . TGME49_226420 235 ATEYYFK|QL 0.090 . TGME49_226420 248 FDMNGEK|LI 0.060 . TGME49_226420 265 MDNSQEK|RW 0.068 . TGME49_226420 266 DNSQEKR|WA 0.313 . TGME49_226420 271 KRWAAQK|AV 0.111 . TGME49_226420 274 AAQKAVK|QG 0.057 . TGME49_226420 279 VKQGLER|HK 0.089 . TGME49_226420 281 QGLERHK|IT 0.062 . TGME49_226420 301 GSWHMER|KE 0.091 . TGME49_226420 302 SWHMERK|ER 0.111 . TGME49_226420 304 HMERKER|GY 0.344 . TGME49_226420 308 KERGYER|LR 0.080 . TGME49_226420 310 RGYERLR|SS 0.103 . TGME49_226420 313 ERLRSSR|NV 0.326 . TGME49_226420 322 ANNVSDK|TI 0.091 . TGME49_226420 340 VAVSLTK|RY 0.059 . TGME49_226420 341 AVSLTKR|YF 0.180 . TGME49_226420 344 LTKRYFK|LK 0.139 . TGME49_226420 346 KRYFKLK|KK 0.070 . TGME49_226420 347 RYFKLKK|KI 0.108 . TGME49_226420 348 YFKLKKK|IL 0.085 . TGME49_226420 351 LKKKILK|NR 0.065 . TGME49_226420 353 KKILKNR|AG 0.103 . TGME49_226420 364 VFDFADR|LA 0.070 . TGME49_226420 371 LAPLPLK|SS 0.072 . TGME49_226420 375 PLKSSDR|LY 0.115 . TGME49_226420 380 DRLYDWK|ES 0.067 . TGME49_226420 384 DWKESTR|IV 0.130 . TGME49_226420 387 ESTRIVR|DA 0.433 . TGME49_226420 391 IVRDAYK|SF 0.089 . TGME49_226420 403 MALMFDK|LL 0.069 . TGME49_226420 409 KLLEEER|ID 0.081 . TGME49_226420 418 APAVPGK|RT 0.071 . TGME49_226420 419 PAVPGKR|TP 0.128 . TGME49_226420 443 EHVGQPR|CV 0.147 . TGME49_226420 485 ASLMGER|IV 0.093 . TGME49_226420 493 VFNDLLR|RT 0.081 . TGME49_226420 494 FNDLLRR|TT 0.154 . TGME49_226420 501 TTDPEER|LS 0.068 . TGME49_226420 507 RLSHLLR|YL 0.207 . TGME49_226420 518 WTSTVTR|QL 0.095 . TGME49_226420 527 MFDDFER|RV 0.147 . TGME49_226420 528 FDDFERR|VH 0.098 . TGME49_226420 533 RRVHDAR|AQ 0.176 . TGME49_226420 548 AFTTMWK|ES 0.057 . TGME49_226420 553 WKESLEK|YF 0.083 . TGME49_226420 574 SEADWAR|IP 0.100 . TGME49_226420 600 AVGSLYR|VY 0.077 . TGME49_226420 603 SLYRVYK|AH 0.191 . TGME49_226420 612 PEGFEQK|YL 0.077 . TGME49_226420 618 KYLDILR|SG 0.089 . TGME49_226420 622 ILRSGNK|KS 0.060 . TGME49_226420 623 LRSGNKK|SF 0.274 . TGME49_226420 630 SFEEIMK|PF 0.066 . TGME49_226420 663 AESLALK|LG 0.059 . ____________________________^_________________

  • Fasta :-

    >TGME49_226420 GTCTAATCCACGTCAACTAATCCGGAGGCACCGCACACTACGATCGGAGGAACCCAGCGC TGCGGTGTGCTGCGGACGGTTACTAACGCTAGTGAACCTGCAATGTACCCAGTATGGATA TCACGGTGCAATATCCACAGTGTTTCACTCGTGTTTTTGCGCATTGTTGCAATTCACCCG AGGTTATGGAAATCCTTACCATTTTTCATTTATCCAGGGGTCCGCCGTTCGGGAGTTTCA CAAGGGATCGGGCTAATCAAGCGTGAGTCAAGCGCGCCTGCGTCACACGATGCCAGTTTT CCCAGAATTTTCGGCGCCGCGTAGTTGCCTTCGGAATTTCATTTGATTCTCAATTAACAT CTGAAAACACTGTTCCATGCTTGACCGTTTATTTGTACCCGGGCATCTGCCTGTACCATC TACAATCGAAGTGTCAAGTGGTCGCACTGGCCAGTCATCTTGTCGCCACGAAGAACCCAC TGGTCTCTAGCCTGTTGCGTCCAGCTTTTCCTCTTGCTCGGTGGTACATTGCACTGAAGG TATTGGCCGTCACATGTTTGTGTGTGGCGAGCATAGGAAGGATCACCTTTTAGCATCGGG GCAAGGATGATTTCTCCGGTTGCGTCGGTGTTTTCAACAATGCCCCATTGGAAACAGGGT GCCAGGCTGCACGCGCCGGGGGGCCGGTTTACTTTCGCAGCGAGGATCTATCTTTTTCTT CTTCTTTCTTGTTTGGGCTTCTCGTGCTCAGGCGAGATCGCTAACGGAAAAGGGACGGAT ACTACTCCAGCACGCCTAGATCCCCGTACTCTCCCTCGGTACAACCTGAAGCGCCATTTC CCCTATTCATCGATCTTTGATCCTGCAATCGATAGGGACATCGAAGCGCTCAGCCGCAGG GCCCGAGAGTTCAAGGAGAGATTCAAAGGCACCCTGGAAACCACCCTTCTGGAGGCGCTC ATCAAGCACGAGCAGCTAGATGAAGCTGTGGACTTTGTCGACTACTACATTGCCCTTGTC GCTGCAGTGAACACCACAAATGAGGAGATTCGCAAGCGAGTGAATCAATTGGAGTCGGCC ATAGCCGCTGATGTGCAGCCTTATAGACTTTTCGTGAATCTAGAGCTTGGGGCAATGCCG GAGGCAGCTCTGCAAAAGCAGATGGCAGCAAATGGCAATCTCAGCTTTTATTCCGGCTTT CTTGGCGCGGCACGACGACGCGCGCCTTATGTTCTGTCTGAAGACGTCGAGCGCGCACTC CTTGTTCGGAAGCCCATGACTGTGCAAGTTGCCACTGAGTACTACTTCAAGCAACTCGGC GACGCAACCTTCGACATGAACGGCGAGAAGCTGATTTTGTCGATGATCCTCGCGTTCATT ATGGACAACAGCCAAGAGAAGCGCTGGGCCGCGCAGAAGGCTGTGAAGCAAGGTCTCGAA CGGCACAAGATCACCAACTTTGCAGCGCTCAGTTTAAACGTTGTGGCGGGGTCGTGGCAC ATGGAGAGAAAGGAGAGAGGTTACGAGAGGCTGCGGTCGTCCCGGAACGTCGCCAACAAT GTGTCTGACAAAACAATTGACGCGCTCATCCACGCAGGGGAGACTGTCGCAGTGTCGTTG ACGAAGCGGTACTTCAAGTTGAAAAAGAAAATTCTCAAGAACCGGGCTGGAGTGGAGGTT TTCGACTTCGCTGATCGGCTAGCTCCATTGCCCCTCAAATCCAGCGATCGCCTTTACGAC TGGAAAGAATCAACGAGAATCGTCCGAGATGCGTACAAGTCCTTCTCGCCGACCATGGCC CTGATGTTCGACAAACTGCTTGAGGAAGAGAGGATTGACGCCCCTGCCGTTCCAGGAAAA CGCACGCCAGCATGCTACTTGGGCACACCGACAACAGGCCCCTTCATCATTCTCGAGCAT GTTGGACAACCCCGTTGTGTGGAAACTCTCGCTCACGAAGCCGGCCACGCAATCCATTCC ATGTTGTCCTACGAGCAAGGAAACCTGCAGCTCGCACCGCCCCTGACGATTGCAGAAATG GCGAGCCTCATGGGAGAGAGAATAGTATTCAATGACTTGTTGCGCCGGACGACGGATCCT GAGGAGCGCCTTTCTCATCTGCTTCGCTATCTAGATGGATGGACTAGCACTGTTACTCGG CAGCTTATGTTCGATGACTTCGAGAGAAGAGTGCATGATGCCCGCGCACAAGGGACAATA CCGGATGGCGCATTCACAACAATGTGGAAGGAGTCACTTGAGAAGTACTTTGGTGCTGAA GGCGAGGTGTTTGACTCCTATGCGAACTCAGAGGCGGATTGGGCCCGCATTCCACACTTT CATAATACGCCCTTCTATGTCTACGCGTACGCGTTCTCCGACCTTGCCGTGGGCTCTCTC TACCGCGTGTACAAGGCACACCCCGAAGGCTTCGAACAGAAATACCTTGACATTTTGCGG TCAGGAAATAAAAAGAGCTTCGAGGAGATCATGAAGCCTTTCGGTCTGAACCCGTCGGCT GAGACATTCTGGGCTGACGCTGTGGAAGCTACAGGAGGAACGGTAATCGACGAGGCCGAG TCCCTTGCCCTCAAGCTGGGCTTTGTCTGATAAACGTCCGATGTTCTCCATCGACAACGC CTGTCGGCGAACAACCTGATACTGCATGTTGAGACAGTGACGAGATGTGTAAGCATTTCG TTTAGGTGGAAACGACTTTTTTCACGGATGAACAACAAAAACAATGTTGCGTCATACCAT CCTCACCGTCGTGAGGCGTCTGCTTGCAACGCTGGTTTTAGTTCTGTAGTCGGCGGTGGT AAGAGGGTGCAATGCAACATCGTTCTGGTTGTAGTAACCGTCTACGATGAGCCCATGCTA CCACAGTGGAATCGCGTCTTCGTTTCTACTCGCCCGACGTTTTATCACAATTGTCTACAT GACTGTTTTTGCTGGTTCCACATTGAGCATCCCGGTGGCGAACTGTGCCCCATCAAGTGA TGTCTACGAGTTCGTCGTTTCCGCTGTTTCCTTGACCTGGATAACAGTGGCTCTGGATAC AGAATT
  • Download Fasta

  • Fasta :-

    MISPVASVFSTMPHWKQGARLHAPGGRFTFAARIYLFLLLSCLGFSCSGEIANGKGTDTT PARLDPRTLPRYNLKRHFPYSSIFDPAIDRDIEALSRRAREFKERFKGTLETTLLEALIK HEQLDEAVDFVDYYIALVAAVNTTNEEIRKRVNQLESAIAADVQPYRLFVNLELGAMPEA ALQKQMAANGNLSFYSGFLGAARRRAPYVLSEDVERALLVRKPMTVQVATEYYFKQLGDA TFDMNGEKLILSMILAFIMDNSQEKRWAAQKAVKQGLERHKITNFAALSLNVVAGSWHME RKERGYERLRSSRNVANNVSDKTIDALIHAGETVAVSLTKRYFKLKKKILKNRAGVEVFD FADRLAPLPLKSSDRLYDWKESTRIVRDAYKSFSPTMALMFDKLLEEERIDAPAVPGKRT PACYLGTPTTGPFIILEHVGQPRCVETLAHEAGHAIHSMLSYEQGNLQLAPPLTIAEMAS LMGERIVFNDLLRRTTDPEERLSHLLRYLDGWTSTVTRQLMFDDFERRVHDARAQGTIPD GAFTTMWKESLEKYFGAEGEVFDSYANSEADWARIPHFHNTPFYVYAYAFSDLAVGSLYR VYKAHPEGFEQKYLDILRSGNKKSFEEIMKPFGLNPSAETFWADAVEATGGTVIDEAESL ALKLGFV

  • title: Zn binding site
  • coordinates: H450,H454,E477
No Results
No Results
No Results

TGME49_026420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India