TGME49_228190 | eukaryotic initiation factor-3, subunit 5, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_228190OTHER0.9101500.0023420.087508
No Results

  • Fasta :-

    >TGME49_228190 MIRSVSRSVGTSSQQHNVPKHFDILPYPPLKVRVHPVVVLTILDAYLRREEGQMNVIGTL LGTVSEGNVVDISDCFVDRHSLTDEGLLQIIKDHHETMYELKQQVSGSGTKDIVVGWFCT GSEMTELTCAVHGWFKQFNSVSKFHPQPPLTEPIHLMVNTTMDRDNLSIKAYMQVPMNMA KDACFQFQELPLELFASSSDRAGLSLLLKVREANRRHRQQHDGSRASALSSSSTSSAAAV AAISDTPGVAGVPVIKQGLGAALEKLSDQLNKCGAYVRSVLDGSEKADPEIGRFLSKALC VEAVQDLEVFEQMCQNALQDNLMVVHLTSLARLQFAVAEKLNTSFF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_228190.fa Sequence name : TGME49_228190 Sequence length : 346 VALUES OF COMPUTED PARAMETERS Coef20 : 4.160 CoefTot : -1.844 ChDiff : -6 ZoneTo : 43 KR : 5 DE : 1 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.382 1.482 0.177 0.574 MesoH : -0.489 0.317 -0.329 0.170 MuHd_075 : 23.160 18.685 8.473 5.889 MuHd_095 : 31.005 17.607 8.819 7.387 MuHd_100 : 32.255 18.143 8.716 7.238 MuHd_105 : 35.116 21.439 9.144 7.609 Hmax_075 : 6.183 8.283 0.068 2.870 Hmax_095 : 7.962 8.200 -0.322 3.133 Hmax_100 : 9.900 8.600 -0.224 3.480 Hmax_105 : 4.100 9.700 1.855 3.313 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5657 0.4343 DFMC : 0.5355 0.4645
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 346 TGME49_228190 MIRSVSRSVGTSSQQHNVPKHFDILPYPPLKVRVHPVVVLTILDAYLRREEGQMNVIGTLLGTVSEGNVVDISDCFVDRH 80 SLTDEGLLQIIKDHHETMYELKQQVSGSGTKDIVVGWFCTGSEMTELTCAVHGWFKQFNSVSKFHPQPPLTEPIHLMVNT 160 TMDRDNLSIKAYMQVPMNMAKDACFQFQELPLELFASSSDRAGLSLLLKVREANRRHRQQHDGSRASALSSSSTSSAAAV 240 AAISDTPGVAGVPVIKQGLGAALEKLSDQLNKCGAYVRSVLDGSEKADPEIGRFLSKALCVEAVQDLEVFEQMCQNALQD 320 NLMVVHLTSLARLQFAVAEKLNTSFF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_228190 3 ----MIR|SV 0.289 . TGME49_228190 7 MIRSVSR|SV 0.345 . TGME49_228190 20 QQHNVPK|HF 0.080 . TGME49_228190 31 LPYPPLK|VR 0.054 . TGME49_228190 33 YPPLKVR|VH 0.080 . TGME49_228190 48 ILDAYLR|RE 0.074 . TGME49_228190 49 LDAYLRR|EE 0.151 . TGME49_228190 79 SDCFVDR|HS 0.095 . TGME49_228190 92 GLLQIIK|DH 0.059 . TGME49_228190 102 ETMYELK|QQ 0.062 . TGME49_228190 111 VSGSGTK|DI 0.070 . TGME49_228190 136 AVHGWFK|QF 0.061 . TGME49_228190 143 QFNSVSK|FH 0.070 . TGME49_228190 164 VNTTMDR|DN 0.076 . TGME49_228190 170 RDNLSIK|AY 0.089 . TGME49_228190 181 VPMNMAK|DA 0.116 . TGME49_228190 201 FASSSDR|AG 0.083 . TGME49_228190 209 GLSLLLK|VR 0.066 . TGME49_228190 211 SLLLKVR|EA 0.095 . TGME49_228190 215 KVREANR|RH 0.083 . TGME49_228190 216 VREANRR|HR 0.134 . TGME49_228190 218 EANRRHR|QQ 0.358 . TGME49_228190 225 QQHDGSR|AS 0.077 . TGME49_228190 256 AGVPVIK|QG 0.057 . TGME49_228190 265 LGAALEK|LS 0.064 . TGME49_228190 272 LSDQLNK|CG 0.062 . TGME49_228190 278 KCGAYVR|SV 0.164 . TGME49_228190 286 VLDGSEK|AD 0.060 . TGME49_228190 293 ADPEIGR|FL 0.154 . TGME49_228190 297 IGRFLSK|AL 0.069 . TGME49_228190 332 HLTSLAR|LQ 0.081 . TGME49_228190 340 QFAVAEK|LN 0.060 . ____________________________^_________________

  • Fasta :-

    >TGME49_228190 CTTTTCCGGCGAGTTCCTTTCTGTGCAAGCAGAGAAGGAATCGTGCATCTGCGTCATGCT ATGAACTCTTCGTTTCGATTTTCGACGACAGTCTCCTGTTCCCGTTCTGGCGCGTTTTCT CTCCCACTGAATAGTGCCACCGGTTTGTCTTAGAAAACACTTTGCCACGCTTTCTGCGTA CCCTGGACTTTCTGGCCTTCTTCCGAAGAAAGCCTGAATCTGCGAAGGTCCGTTCCTGTC CCGCAGAGACCCGTGGGCTGCGTGTTGGACGGTTCACCACGTGTCTGGTTCCTTTTTTCT CGTCAGCTTAACGCCGCGCCGGTGTTGTGTGGGGACGCGAAGGATAGACTTCTTTTTTTC TGCTTGGCCGGAGTTGTTTCTCTCTAATTCATATCTTTTCCCCTTCGCGCTTTCGTCGAC GTTTTCCTTCTGAGAACGCCCGAGTCGTCTGCACAGAACCCGATTTACCCCCCCAACTGT TTCGCAGTGAAGCGTGCGGCAAAGCGCAACGCACCCGGGCTGACCAGGCAGATTTTTTGG TCGGTTCTGCCGGGGAGAAGTTCTCTTACAAATTCGTCTTTTCTGTCCGTACCAAGTTCG TCACTTTGGGGCGGCATATCTTCCTGGTGCCAGGTCGCCCCGCCTGTCATTGCGACGAGA ATTCCTCACTCCTTGGAGGAAGCCAGAATCGATCTGCTCAGCGCTCTCTTTGAAGCACAA TGATAAGGTCAGTGTCCAGGTCCGTTGGGACCTCTTCTCAGCAGCACAATGTGCCCAAGC ACTTTGATATTCTCCCGTACCCCCCCCTCAAAGTGCGGGTCCACCCCGTCGTCGTCCTCA CGATCTTGGATGCCTACCTGAGACGCGAAGAGGGTCAGATGAACGTCATTGGAACGCTTC TCGGAACAGTGTCCGAAGGCAATGTTGTGGACATCTCAGACTGCTTCGTCGACAGACACT CGCTCACAGATGAGGGTCTGTTGCAAATCATCAAGGACCACCACGAGACCATGTACGAGC TGAAACAGCAAGTTAGCGGCAGCGGCACCAAGGACATCGTCGTGGGTTGGTTCTGCACTG GGAGCGAAATGACGGAGTTGACCTGTGCCGTCCACGGCTGGTTCAAGCAGTTCAACAGCG TCTCGAAGTTCCACCCGCAGCCGCCGCTTACGGAGCCCATTCACTTGATGGTGAACACAA CCATGGATCGCGACAACCTTTCCATCAAGGCCTACATGCAAGTCCCGATGAACATGGCCA AGGACGCTTGCTTCCAGTTCCAGGAACTGCCTCTTGAATTGTTTGCCTCCTCGTCCGACC GCGCGGGTCTTTCCCTGCTCTTGAAGGTCCGGGAGGCGAACCGACGCCACCGCCAGCAGC ACGATGGCAGCCGGGCGAGTGCGCTCTCGAGCAGCTCAACCTCGTCCGCCGCCGCTGTGG CAGCGATCAGCGATACCCCTGGAGTTGCAGGTGTCCCGGTCATCAAGCAGGGCTTGGGTG CTGCTCTCGAGAAGCTGTCTGATCAGCTGAACAAGTGCGGAGCGTACGTCAGGAGCGTCC TCGATGGCTCTGAAAAGGCGGACCCCGAAATTGGCCGGTTCCTTAGCAAGGCGCTCTGCG TGGAGGCTGTTCAGGACCTCGAGGTCTTTGAACAGATGTGCCAGAACGCACTCCAAGATA ACCTGATGGTCGTCCACCTCACCAGCCTTGCTCGGCTACAGTTTGCTGTGGCTGAGAAAC TCAACACGTCCTTCTTCTAAACTTGGGGAGCCTCCTGTTGGTAATACAGCTCGGGACTTG ACACAGGTGCGGACGGTGTGACGCGTGCTTGTGTCAGTGCAGCGCGGTGCATTTGTTGTC TCTATCGCTCACTCTTTGTCCGGTCGTCTATGGGAGTCTCAGGCTGTGGACCCTGTCGAA AGAAAACTCCACTTTTATCTTGTCCTTGATACTGCGCACACTTCGGGGTTGTGCCGAGGC GGTTGGGGGCCAACGAACGGACGCTCCGGGGCCCTGTGGAGTGGGCGAGACGAGCGTCTT GGAAGTAGCCCGCCTCTCTTCCCGCTCGAAAGTCCACGGACACCACTGCATTCTGCTCTG TTTGGTACATATGGTATAGCTCGAGTGCCCAAGCAAAGTTAGGATGTGGATTCTTGATCT TTTTTGTCGCTGAGATGACACACACGCCCCCAGAAGTTCTCTAGTTTTGCGAAGACACGG AAGCTCTGCGCGGCATCGAAACTTCGTGCCGCGACACTACGGCGAGTGAATGTAACGCGC TTTGTCTTGTTTTGAGCGGTTGCGAGTCTCAAAACAACCACACGCTTTTTCACTCGTGGC AGTCTTACAACTTGCGCCAGACAAGCGACTTCCATTGCTAGGTACCCAGTGACGACATAG GACCGCTGTTTGCCGGATTAAGCAGATCGACCAGAGGCAACGTTTCAACAAATGGAAAGT GACGGAGGACCAGGTGAACACTTTGTGACCGGTCACAGGCCTATCGCCCATTTAGAAGTC TTGATCTTCACTTGAGGCGAGCGAGCTGCCTTCGATGCAGAGAAATCAAAGGCACGCGAG CTCTTCTCACATAAGCGCAACCGTGCTGAAAGCGGGTTCGACTGTAGTAGCGCCTGCAAC GTTTCAGGAATTTCCCAGGCTAACCGAGATCAAGGCTCCGCTTGAACGTTTTCATCTGAC CGGCAAGCTAGAGAAACGAATCTGTATATCCTTTTATAGTGGCACACAAAACATTGTCTT GCTTTTCTACGCAATGTAGGGTGTCCTGGGCCTGTTTCAAATCTCATTTTCACGTCTCAA AAATGACAAATCGAAAGGCGAGCACCTGGCTTGCATCATTCACGGCATTCAGGACTTCCA AGAACAGACACTAATAGCATTACTTGAATAGTGAACTTAAGTGGTACTTCAAAAGGCACG GCTTGTACCAGAAGACGAAGTCGTGATACGTGCCCGCTCTCTGAAGAGTGCGCTGTGTCA CAGGGGAAAATCCTATCGTCGTGGTATGTCGTACACACTACGTGCGATGCATTTCGACCC AGAGAGACCCCTTGCAGTGTGATATCACTTCCCGGGCCTCCTGTGACGGCATTTACGGAA TTGCGACATTCGTGGTACTGGAGGCGCACGCAGGGACAACATGGCTCGATCGGAGGAGTT GCAAGCTCCGTCAAAACGCACACGCGGAAAAAAA
  • Download Fasta

  • Fasta :-

    MIRSVSRSVGTSSQQHNVPKHFDILPYPPLKVRVHPVVVLTILDAYLRREEGQMNVIGTL LGTVSEGNVVDISDCFVDRHSLTDEGLLQIIKDHHETMYELKQQVSGSGTKDIVVGWFCT GSEMTELTCAVHGWFKQFNSVSKFHPQPPLTEPIHLMVNTTMDRDNLSIKAYMQVPMNMA KDACFQFQELPLELFASSSDRAGLSLLLKVREANRRHRQQHDGSRASALSSSSTSSAAAV AAISDTPGVAGVPVIKQGLGAALEKLSDQLNKCGAYVRSVLDGSEKADPEIGRFLSKALC VEAVQDLEVFEQMCQNALQDNLMVVHLTSLARLQFAVAEKLNTSFF

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethod
TGME49_22819081 SVDRHSLTDE0.998unsp

TGME49_028190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India