TGME49_228210 | 26S proteasome regulatory subunit

_IDPredictionOTHERSPmTPCS_Position
TGME49_228210OTHER0.9997560.0002100.000034
No Results

  • Fasta :-

    >TGME49_228210 MVTSTAQPGGGDDERARALQAYVAKVKEHRECEAKVKKLREEVKKQSGRYEKTEDDLKAL QGVGQLIGEVLKQLDSEKFIVKMSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRK LQREVDPLVFNMLHEDPGSVQYGEVGGLSEQIRQMREVIELPLTNPELFKRVGIKTPKGV LLYGPPGTGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYARDHEPCII FMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALM RPGRLDRKIEIPLPNETARVDILKIHSSKIAKQGDIDYEAICKLCDGFNGADLRNVCTEA GMFAIRAERDYVVEEDFFKAARKLADNKKLESTIDYDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_228210.fa Sequence name : TGME49_228210 Sequence length : 398 VALUES OF COMPUTED PARAMETERS Coef20 : 3.437 CoefTot : -0.905 ChDiff : 0 ZoneTo : 11 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.535 0.918 -0.070 0.320 MesoH : -0.784 0.272 -0.406 0.163 MuHd_075 : 16.790 9.915 4.245 2.438 MuHd_095 : 2.818 6.658 0.959 1.759 MuHd_100 : 9.216 8.884 2.754 2.557 MuHd_105 : 10.971 10.724 3.790 3.162 Hmax_075 : -3.267 -1.925 -2.400 0.712 Hmax_095 : -1.600 0.525 -2.393 1.453 Hmax_100 : 0.400 1.700 -1.553 2.010 Hmax_105 : -0.200 3.733 -0.811 2.350 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9886 0.0114 DFMC : 0.9731 0.0269
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 398 TGME49_228210 MVTSTAQPGGGDDERARALQAYVAKVKEHRECEAKVKKLREEVKKQSGRYEKTEDDLKALQGVGQLIGEVLKQLDSEKFI 80 VKMSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRKLQREVDPLVFNMLHEDPGSVQYGEVGGLSEQIRQMREVIE 160 LPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYARDHEPCII 240 FMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALMRPGRLDRKIEIPLPNETARV 320 DILKIHSSKIAKQGDIDYEAICKLCDGFNGADLRNVCTEAGMFAIRAERDYVVEEDFFKAARKLADNKKLESTIDYDF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_228210 15 GGGDDER|AR 0.070 . TGME49_228210 17 GDDERAR|AL 0.102 . TGME49_228210 25 LQAYVAK|VK 0.076 . TGME49_228210 27 AYVAKVK|EH 0.063 . TGME49_228210 30 AKVKEHR|EC 0.107 . TGME49_228210 35 HRECEAK|VK 0.061 . TGME49_228210 37 ECEAKVK|KL 0.068 . TGME49_228210 38 CEAKVKK|LR 0.111 . TGME49_228210 40 AKVKKLR|EE 0.093 . TGME49_228210 44 KLREEVK|KQ 0.065 . TGME49_228210 45 LREEVKK|QS 0.219 . TGME49_228210 49 VKKQSGR|YE 0.103 . TGME49_228210 52 QSGRYEK|TE 0.120 . TGME49_228210 58 KTEDDLK|AL 0.061 . TGME49_228210 72 LIGEVLK|QL 0.068 . TGME49_228210 78 KQLDSEK|FI 0.066 . TGME49_228210 82 SEKFIVK|MS 0.068 . TGME49_228210 88 KMSSGPR|YM 0.097 . TGME49_228210 94 RYMVGSK|PK 0.059 . TGME49_228210 96 MVGSKPK|ID 0.077 . TGME49_228210 99 SKPKIDK|AS 0.071 . TGME49_228210 107 SLTAGTR|VA 0.075 . TGME49_228210 119 TTLTVMR|KL 0.081 . TGME49_228210 120 TLTVMRK|LQ 0.077 . TGME49_228210 123 VMRKLQR|EV 0.142 . TGME49_228210 153 GLSEQIR|QM 0.130 . TGME49_228210 156 EQIRQMR|EV 0.341 . TGME49_228210 170 TNPELFK|RV 0.087 . TGME49_228210 171 NPELFKR|VG 0.148 . TGME49_228210 175 FKRVGIK|TP 0.067 . TGME49_228210 178 VGIKTPK|GV 0.074 . TGME49_228210 190 GPPGTGK|TL 0.060 . TGME49_228210 195 GKTLLAR|AM 0.083 . TGME49_228210 207 MNCNFMK|VV 0.089 . TGME49_228210 216 ASAIVDK|YI 0.098 . TGME49_228210 223 YIGESAR|VI 0.103 . TGME49_228210 226 ESARVIR|EM 0.333 . TGME49_228210 233 EMFAYAR|DH 0.110 . TGME49_228210 251 IDAIGGR|RF 0.101 . TGME49_228210 252 DAIGGRR|FS 0.106 . TGME49_228210 261 QGTSADR|EI 0.077 . TGME49_228210 265 ADREIQR|TL 0.106 . TGME49_228210 284 DELGAVK|II 0.056 . TGME49_228210 291 IIMATNR|PD 0.074 . TGME49_228210 301 LDPALMR|PG 0.072 . TGME49_228210 304 ALMRPGR|LD 0.280 . TGME49_228210 307 RPGRLDR|KI 0.352 . TGME49_228210 308 PGRLDRK|IE 0.069 . TGME49_228210 319 LPNETAR|VD 0.116 . TGME49_228210 324 ARVDILK|IH 0.069 . TGME49_228210 329 LKIHSSK|IA 0.082 . TGME49_228210 332 HSSKIAK|QG 0.080 . TGME49_228210 343 DYEAICK|LC 0.055 . TGME49_228210 354 FNGADLR|NV 0.133 . TGME49_228210 366 AGMFAIR|AE 0.090 . TGME49_228210 369 FAIRAER|DY 0.282 . TGME49_228210 379 VEEDFFK|AA 0.068 . TGME49_228210 382 DFFKAAR|KL 0.085 . TGME49_228210 383 FFKAARK|LA 0.085 . TGME49_228210 388 RKLADNK|KL 0.063 . TGME49_228210 389 KLADNKK|LE 0.108 . ____________________________^_________________

  • Fasta :-

    >TGME49_228210 TGTTTTGGAACCTCTGCTTTCTTGCATGTGTGAAGCCTGTCTCGAGGTGCGGAACTACAT TCCAACCAAGGCTGCTGGCTTTTGGGACAAGAGTCGCTCTTTCTTGTGTGCCGGATACCG CAGAATTGGACGAGACGCGTAGAAGTGACGGATAAAAAAGGACTCTGTGTTTCTCAAAAA TCCCAGGTTTTTCGGCGTAAACTGCGGTGCATGCGCGAGTGTCGCGAGGCGCCTCTCTCT CGGCACGAAGACAAGCCGTTCGCCTCTCCCTCTCTGAGCTCGTTTTTCGCTTCTTTTCTC CCGGAGGCTCGCATCAAAGACGTTTCCAGTGTTTGTCTTTCGTACCCTCGTGCGTTCCCG TGGTTTTCCTTGGACGCGGAACTCCATTTTGTCGTCTTTCCCGTTCGCGGAATCCAGCCT CTTCGGGACCGCGCTACTTTTCGTCGTCTGCGCGTGCAAGGAAGTCGACAACGCATCCGC CGTTCTAGCCTTTCTTCAGCGTCGTCTCTCGCGTTTTTCATCTGGCGAGAGCCGTTCTGC CCGGTTCTCAGCAAAGCCTTCGCGACACACAGACTCCAGGTCGGCGGCGACTGTCGCTTT CTCTTTGGGTTTTCTCTCCAGTTTCCGCGCGCGCTGAAACTCGGAAACTCCGGGACTCTC TTCCACTGAAAACACCAAACCGCAAACCTCTCAGGCGGAACATCTGTCCTCTCTCTCTTC GGTTCTGCTTCTTCCGTCACGATCATGGTCACCTCTACAGCTCAGCCTGGGGGAGGAGAC GACGAGAGAGCAAGAGCTCTCCAGGCGTATGTCGCCAAAGTCAAGGAACACAGAGAGTGT GAAGCGAAAGTGAAGAAACTTCGAGAAGAAGTGAAGAAACAGTCTGGTCGATATGAGAAG ACCGAAGACGACTTAAAAGCGCTGCAGGGCGTCGGCCAGCTAATTGGGGAAGTTCTCAAG CAACTGGACTCTGAGAAATTCATCGTCAAAATGTCCAGTGGACCACGCTACATGGTCGGC AGCAAACCGAAAATCGACAAAGCCTCTCTCACAGCCGGCACCCGCGTCGCTCTCGACATG ACGACACTGACAGTGATGCGGAAGCTGCAGAGAGAAGTGGACCCTCTTGTTTTCAACATG CTCCATGAGGATCCGGGAAGTGTGCAGTACGGAGAGGTAGGAGGTCTCAGCGAGCAGATC CGACAGATGCGCGAGGTGATTGAGTTACCTCTTACAAATCCTGAACTGTTCAAGAGAGTC GGCATCAAGACCCCCAAAGGCGTTCTCCTCTACGGTCCGCCAGGAACAGGGAAAACTCTT CTTGCTCGCGCGATGGCGTCCAACATGAACTGCAACTTCATGAAGGTCGTGGCGTCCGCG ATCGTCGACAAGTACATCGGAGAGAGTGCCCGAGTTATCCGTGAGATGTTTGCCTACGCC CGCGACCACGAGCCGTGCATCATCTTCATGGATGAGATCGACGCCATCGGAGGCCGCCGG TTCTCTCAAGGCACCTCAGCTGACCGCGAAATTCAGCGCACTCTCATGGAGTTGCTGAAT CAACTGGACGGATTCGATGAACTTGGCGCAGTGAAGATCATCATGGCCACCAACAGACCA GACGTCCTCGACCCGGCTCTTATGCGCCCCGGTCGTCTCGATCGGAAAATCGAAATTCCG CTGCCCAACGAGACGGCCCGTGTTGACATCTTGAAAATCCACTCCAGCAAAATCGCGAAA CAGGGCGACATCGACTACGAGGCAATCTGCAAGCTGTGCGACGGCTTCAATGGCGCAGAT CTGCGAAACGTCTGTACAGAGGCTGGCATGTTTGCGATTCGGGCAGAGAGAGACTATGTG GTGGAAGAAGATTTTTTCAAGGCCGCTAGGAAGTTGGCGGACAACAAGAAACTGGAGAGC ACTATCGACTACGACTTTTGAGATTGCAGGTCTTCTGTGTCTCCCCGTGCTTTTCTGCTT CTCGCTTGTTTCCAGTGTTCTTTTCCAGTGTATCTCTTGTGTTTCAACTCGTTTTGTTTT TGAACAGGGAGGGATTGTCGCTTTCTCCTAACTCGACTTTCGCGACAGTGTGTGCAGAGA AGAGTGCGGCCGGGGCGGAA
  • Download Fasta

  • Fasta :-

    MVTSTAQPGGGDDERARALQAYVAKVKEHRECEAKVKKLREEVKKQSGRYEKTEDDLKAL QGVGQLIGEVLKQLDSEKFIVKMSSGPRYMVGSKPKIDKASLTAGTRVALDMTTLTVMRK LQREVDPLVFNMLHEDPGSVQYGEVGGLSEQIRQMREVIELPLTNPELFKRVGIKTPKGV LLYGPPGTGKTLLARAMASNMNCNFMKVVASAIVDKYIGESARVIREMFAYARDHEPCII FMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGAVKIIMATNRPDVLDPALM RPGRLDRKIEIPLPNETARVDILKIHSSKIAKQGDIDYEAICKLCDGFNGADLRNVCTEA GMFAIRAERDYVVEEDFFKAARKLADNKKLESTIDYDF

  • title: ATP binding site
  • coordinates: P185,P186,G187,T188,G189,K190,T191,L192,D243,N290
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_228210254 SGRRFSQGTS0.994unspTGME49_228210392 SKKLESTIDY0.995unsp

TGME49_028210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India