TGME49_231900 | acyl-CoA dehydrogenase domain-containing protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_231900OTHER0.9987430.0001380.001118
No Results

  • Fasta :-

    >TGME49_231900 MGRAGRNIRAEGRLVQLSGQVKREPVDSTLCSKNSDGKSSNDNSSDELQDGKPAADMRHG KTGGGPIYALDFMHFDSLLTPRERTLRGRVQNIVSRYVEHAVLPLYEAAAFDSELVEICK KFGPAGLQIKGYGCPGLTHTEAILMAVEMARVDASFSTFYLVHCGLAMQSIAVAGTQEQK AMWLPKMSRLECIGSFGLTEPNHGSDATGLRTSAKKVEGGWILNGQKRWIGNATFSDIVV VWARDVHSEKILGFIVEKDFPGFSATKIENKVSLRIVQNADIVLKDCFVPDSHRLQHEGF SGATAQVLESSRAVVAAECVGVLLGAYDNALKYCTERKQFGRELATFQLVQERLMRVLGM LQGVLLLVLRLGRLMDEGKPHMMAHIALAKATCSRVAREGIALCREVLGGNGIVTDFGVA KFHADIEALYTYEGTYDINMLIAGRAVTGRSAFK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_231900.fa Sequence name : TGME49_231900 Sequence length : 454 VALUES OF COMPUTED PARAMETERS Coef20 : 4.014 CoefTot : 0.053 ChDiff : 4 ZoneTo : 10 KR : 3 DE : 0 CleavSite : 11 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.347 1.747 0.155 0.564 MesoH : -0.001 0.635 -0.206 0.314 MuHd_075 : 14.761 11.327 4.545 2.954 MuHd_095 : 20.906 8.156 4.025 5.140 MuHd_100 : 35.281 16.557 7.224 8.453 MuHd_105 : 46.035 23.557 9.843 11.152 Hmax_075 : -1.050 7.933 -0.829 1.680 Hmax_095 : 8.600 8.100 0.601 3.870 Hmax_100 : 8.600 8.100 0.601 3.980 Hmax_105 : 0.963 7.350 -0.441 2.765 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7867 0.2133 DFMC : 0.7204 0.2796
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 454 TGME49_231900 MGRAGRNIRAEGRLVQLSGQVKREPVDSTLCSKNSDGKSSNDNSSDELQDGKPAADMRHGKTGGGPIYALDFMHFDSLLT 80 PRERTLRGRVQNIVSRYVEHAVLPLYEAAAFDSELVEICKKFGPAGLQIKGYGCPGLTHTEAILMAVEMARVDASFSTFY 160 LVHCGLAMQSIAVAGTQEQKAMWLPKMSRLECIGSFGLTEPNHGSDATGLRTSAKKVEGGWILNGQKRWIGNATFSDIVV 240 VWARDVHSEKILGFIVEKDFPGFSATKIENKVSLRIVQNADIVLKDCFVPDSHRLQHEGFSGATAQVLESSRAVVAAECV 320 GVLLGAYDNALKYCTERKQFGRELATFQLVQERLMRVLGMLQGVLLLVLRLGRLMDEGKPHMMAHIALAKATCSRVAREG 400 IALCREVLGGNGIVTDFGVAKFHADIEALYTYEGTYDINMLIAGRAVTGRSAFK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_231900 3 ----MGR|AG 0.089 . TGME49_231900 6 -MGRAGR|NI 0.352 . TGME49_231900 9 RAGRNIR|AE 0.245 . TGME49_231900 13 NIRAEGR|LV 0.104 . TGME49_231900 22 QLSGQVK|RE 0.056 . TGME49_231900 23 LSGQVKR|EP 0.195 . TGME49_231900 33 DSTLCSK|NS 0.056 . TGME49_231900 38 SKNSDGK|SS 0.086 . TGME49_231900 52 DELQDGK|PA 0.068 . TGME49_231900 58 KPAADMR|HG 0.123 . TGME49_231900 61 ADMRHGK|TG 0.171 . TGME49_231900 82 DSLLTPR|ER 0.071 . TGME49_231900 84 LLTPRER|TL 0.076 . TGME49_231900 87 PRERTLR|GR 0.228 . TGME49_231900 89 ERTLRGR|VQ 0.082 . TGME49_231900 96 VQNIVSR|YV 0.160 . TGME49_231900 120 ELVEICK|KF 0.072 . TGME49_231900 121 LVEICKK|FG 0.098 . TGME49_231900 130 PAGLQIK|GY 0.073 . TGME49_231900 151 MAVEMAR|VD 0.070 . TGME49_231900 180 AGTQEQK|AM 0.054 . TGME49_231900 186 KAMWLPK|MS 0.068 . TGME49_231900 189 WLPKMSR|LE 0.075 . TGME49_231900 211 SDATGLR|TS 0.090 . TGME49_231900 215 GLRTSAK|KV 0.117 . TGME49_231900 216 LRTSAKK|VE 0.099 . TGME49_231900 227 WILNGQK|RW 0.054 . TGME49_231900 228 ILNGQKR|WI 0.377 . TGME49_231900 244 IVVVWAR|DV 0.196 . TGME49_231900 250 RDVHSEK|IL 0.074 . TGME49_231900 258 LGFIVEK|DF 0.062 . TGME49_231900 267 PGFSATK|IE 0.055 . TGME49_231900 271 ATKIENK|VS 0.058 . TGME49_231900 275 ENKVSLR|IV 0.108 . TGME49_231900 285 NADIVLK|DC 0.063 . TGME49_231900 294 FVPDSHR|LQ 0.078 . TGME49_231900 312 QVLESSR|AV 0.111 . TGME49_231900 332 AYDNALK|YC 0.053 . TGME49_231900 337 LKYCTER|KQ 0.089 . TGME49_231900 338 KYCTERK|QF 0.117 . TGME49_231900 342 ERKQFGR|EL 0.108 . TGME49_231900 353 FQLVQER|LM 0.077 . TGME49_231900 356 VQERLMR|VL 0.224 . TGME49_231900 370 VLLLVLR|LG 0.064 . TGME49_231900 373 LVLRLGR|LM 0.197 . TGME49_231900 379 RLMDEGK|PH 0.063 . TGME49_231900 390 AHIALAK|AT 0.063 . TGME49_231900 395 AKATCSR|VA 0.119 . TGME49_231900 398 TCSRVAR|EG 0.369 . TGME49_231900 405 EGIALCR|EV 0.106 . TGME49_231900 421 TDFGVAK|FH 0.086 . TGME49_231900 445 NMLIAGR|AV 0.081 . TGME49_231900 450 GRAVTGR|SA 0.372 . TGME49_231900 454 TGRSAFK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >TGME49_231900 ATGGGTCGAGCAGGAAGAAACATTCGCGCCGAAGGACGACTAGTCCAGCTTTCTGGGCAG GTGAAACGTGAACCTGTCGATTCCACTTTATGTTCAAAAAACTCCGACGGAAAGTCTAGC AATGATAACAGCAGCGACGAACTTCAGGATGGGAAACCAGCCGCCGACATGAGGCACGGA AAGACAGGTGGTGGTCCGATTTACGCCCTTGACTTTATGCATTTTGATAGCCTGTTAACT CCAAGGGAGCGGACGTTACGAGGACGTGTCCAGAACATTGTGAGTCGGTATGTGGAGCAC GCAGTTCTCCCACTTTATGAAGCGGCAGCTTTTGACAGCGAATTGGTGGAGATCTGCAAA AAGTTCGGCCCTGCTGGCCTGCAAATAAAAGGCTATGGATGCCCTGGCTTAACGCACACA GAAGCCATTCTGATGGCAGTGGAGATGGCTCGAGTCGACGCATCATTCTCCACATTTTAC CTCGTCCACTGCGGCCTTGCGATGCAGTCTATCGCTGTCGCCGGCACCCAGGAGCAGAAG GCCATGTGGCTCCCTAAGATGTCACGTCTTGAGTGCATCGGAAGCTTCGGCCTGACGGAA CCCAACCATGGAAGTGATGCTACGGGGCTTCGGACCTCGGCAAAGAAAGTGGAAGGAGGA TGGATTCTGAATGGACAGAAAAGGTGGATTGGGAATGCCACATTCTCGGACATCGTGGTT GTCTGGGCGCGAGACGTGCACTCGGAGAAAATCCTCGGGTTTATAGTGGAGAAGGACTTT CCTGGCTTTTCGGCGACAAAGATAGAGAACAAGGTATCCTTGCGCATCGTGCAGAACGCT GACATAGTCTTGAAAGATTGCTTCGTACCAGATTCGCACAGACTTCAACACGAGGGTTTC TCCGGCGCGACAGCACAGGTCTTGGAATCTTCCCGCGCTGTTGTCGCCGCGGAATGCGTT GGTGTCTTGCTAGGTGCTTACGATAACGCTCTTAAATACTGCACTGAGAGAAAGCAGTTT GGCCGAGAACTGGCAACCTTCCAGCTTGTACAAGAACGCCTTATGCGCGTCCTCGGCATG TTGCAGGGCGTCCTGCTCTTGGTATTGCGCCTCGGTCGTCTGATGGATGAAGGGAAGCCG CATATGATGGCTCACATTGCCCTAGCTAAAGCGACGTGCAGTCGTGTGGCTCGAGAAGGC ATTGCTCTTTGCAGGGAAGTACTAGGAGGAAACGGGATTGTCACAGACTTCGGCGTGGCT AAGTTTCATGCAGACATAGAGGCACTTTATACCTATGAAGGAACCTACGATATCAACATG CTTATTGCGGGTCGAGCAGTGACGGGGCGAAGCGCGTTCAAGTAGACTGCAGGTTATCGT GTTGTGCAACTCGTCTGGATCACCAATTCAAGAAGAAGCTTACCCATGAGTTTTCATTGA TTTGGAAAGCCTACTGCTGACGGTGATCATGTGTTGCACGTTGCTTTAGAGAAATCAGCG TTCTTTGCAGCTTTGCCATTCTGAGGTGGGGAAAAGAAGACAATCAAAGCAAGCGGACAG CTATTCAGACGAGTAAAGCAAGATGGATTCCACAGTTTCATGCTTGCTGCTGGATTGGTC TCATCCCTCCTTTACCCGTCAATCTGTGGTTCGATCTCGACAGTACTATACTAGTGGCGG CAGTGAGACAAGTACAAATCCTGCATAGAATTATCCATAATATCGTTTACAGCTGCCTTT ACGAAACTCTTAAGCCGTCTTCTCTGTTCACCGGCCTTGCTAAGTTATGTAGTAGACGTG TGCGCCCCTTTCACTAGCTCTAGGGAAGGCTCGGTCACACAGCTGTTGTCATATTTTTGT GGCGGATGGAGTTTCCTGGTGTGCATGCGCTTCTTTCCTGTTCCTTAAAATGTGAAAGTA ACGAAATGGAAGCACATGTTCAGAGCGGAAATTGGATGAATAAAAACTGAAGAGATGGGC ACGTACCAGCGATTCTGCTATCGCTGG
  • Download Fasta

  • Fasta :-

    MGRAGRNIRAEGRLVQLSGQVKREPVDSTLCSKNSDGKSSNDNSSDELQDGKPAADMRHG KTGGGPIYALDFMHFDSLLTPRERTLRGRVQNIVSRYVEHAVLPLYEAAAFDSELVEICK KFGPAGLQIKGYGCPGLTHTEAILMAVEMARVDASFSTFYLVHCGLAMQSIAVAGTQEQK AMWLPKMSRLECIGSFGLTEPNHGSDATGLRTSAKKVEGGWILNGQKRWIGNATFSDIVV VWARDVHSEKILGFIVEKDFPGFSATKIENKVSLRIVQNADIVLKDCFVPDSHRLQHEGF SGATAQVLESSRAVVAAECVGVLLGAYDNALKYCTERKQFGRELATFQLVQERLMRVLGM LQGVLLLVLRLGRLMDEGKPHMMAHIALAKATCSRVAREGIALCREVLGGNGIVTDFGVA KFHADIEALYTYEGTYDINMLIAGRAVTGRSAFK

  • title: active site
  • coordinates: L166,F196,L198,W229,G231,T431,Y432,E433,T435,D437
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_231900213 SGLRTSAKKV0.995unspTGME49_231900213 SGLRTSAKKV0.995unspTGME49_231900213 SGLRTSAKKV0.995unspTGME49_23190045 SNDNSSDELQ0.992unspTGME49_23190080 TDSLLTPRER0.992unsp

TGME49_031900      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India