TGME49_232060 | hypothetical protein

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_232060OTHER0.9756070.0237360.000657
No Results

  • Fasta :-

    >TGME49_232060 MWAGSGVAFLCHVEKSALQELESETASSPDVKRQHELPRTPDRGEKATEQAEDKFVTGAS FFAFDRPLAAVGRLFGSAPATRDFSVVQIGNSVQSIHGLLLGGGSVFGLDAVGGLVEFQR KRGIGVSTIAGPIPVCPALGIFDVPALAPDSSFPASSACALPQFVKSEDVATACAEAERR RVAGPASAPESDSGDRRRERGGEKERSVPPAVAPLRVRCRFHSSGSVSTVVAASAPSEQA SPASAGTSREEIDPVPVLSTLPEETVSWIGSVGVGVGATCARVGECAGFAPRKGGWGEAS RYRAWRGELARDKATGTGNDETLKVQAFVVVNSYGDVVATGKDSENAVVAGPLKNGVTFA ASELLQKADHTFLPLSLQPQATTLVAVFTNLDLSRDALWRVAAMAGAGMARAIHPVFSPV DGDAVIAVSTGELTHGDTDPTLSEIIVGTMAAECVAEAIQRAAAVANKL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_232060.fa Sequence name : TGME49_232060 Sequence length : 469 VALUES OF COMPUTED PARAMETERS Coef20 : 3.754 CoefTot : -0.223 ChDiff : -10 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 1.618 0.383 0.666 MesoH : 0.335 0.814 -0.044 0.392 MuHd_075 : 13.054 10.440 2.601 3.882 MuHd_095 : 14.582 9.304 1.973 3.970 MuHd_100 : 12.432 11.841 3.723 3.769 MuHd_105 : 10.800 13.631 5.289 3.387 Hmax_075 : 14.900 15.800 2.732 5.740 Hmax_095 : 15.400 10.850 1.172 5.049 Hmax_100 : 15.200 14.400 1.865 5.930 Hmax_105 : 14.233 17.967 3.219 5.857 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8948 0.1052 DFMC : 0.9062 0.0938
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 469 TGME49_232060 MWAGSGVAFLCHVEKSALQELESETASSPDVKRQHELPRTPDRGEKATEQAEDKFVTGASFFAFDRPLAAVGRLFGSAPA 80 TRDFSVVQIGNSVQSIHGLLLGGGSVFGLDAVGGLVEFQRKRGIGVSTIAGPIPVCPALGIFDVPALAPDSSFPASSACA 160 LPQFVKSEDVATACAEAERRRVAGPASAPESDSGDRRRERGGEKERSVPPAVAPLRVRCRFHSSGSVSTVVAASAPSEQA 240 SPASAGTSREEIDPVPVLSTLPEETVSWIGSVGVGVGATCARVGECAGFAPRKGGWGEASRYRAWRGELARDKATGTGND 320 ETLKVQAFVVVNSYGDVVATGKDSENAVVAGPLKNGVTFAASELLQKADHTFLPLSLQPQATTLVAVFTNLDLSRDALWR 400 VAAMAGAGMARAIHPVFSPVDGDAVIAVSTGELTHGDTDPTLSEIIVGTMAAECVAEAIQRAAAVANKL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_232060 15 FLCHVEK|SA 0.113 . TGME49_232060 32 ASSPDVK|RQ 0.071 . TGME49_232060 33 SSPDVKR|QH 0.150 . TGME49_232060 39 RQHELPR|TP 0.141 . TGME49_232060 43 LPRTPDR|GE 0.122 . TGME49_232060 46 TPDRGEK|AT 0.247 . TGME49_232060 54 TEQAEDK|FV 0.087 . TGME49_232060 66 SFFAFDR|PL 0.098 . TGME49_232060 73 PLAAVGR|LF 0.112 . TGME49_232060 82 GSAPATR|DF 0.156 . TGME49_232060 120 GLVEFQR|KR 0.118 . TGME49_232060 121 LVEFQRK|RG 0.069 . TGME49_232060 122 VEFQRKR|GI 0.253 . TGME49_232060 166 ALPQFVK|SE 0.074 . TGME49_232060 179 ACAEAER|RR 0.075 . TGME49_232060 180 CAEAERR|RV 0.127 . TGME49_232060 181 AEAERRR|VA 0.219 . TGME49_232060 196 ESDSGDR|RR 0.076 . TGME49_232060 197 SDSGDRR|RE 0.193 . TGME49_232060 198 DSGDRRR|ER 0.183 . TGME49_232060 200 GDRRRER|GG 0.406 . TGME49_232060 204 RERGGEK|ER 0.058 . TGME49_232060 206 RGGEKER|SV 0.189 . TGME49_232060 216 PAVAPLR|VR 0.071 . TGME49_232060 218 VAPLRVR|CR 0.073 . TGME49_232060 220 PLRVRCR|FH 0.118 . TGME49_232060 249 ASAGTSR|EE 0.089 . TGME49_232060 282 VGATCAR|VG 0.095 . TGME49_232060 292 CAGFAPR|KG 0.115 . TGME49_232060 293 AGFAPRK|GG 0.081 . TGME49_232060 301 GWGEASR|YR 0.079 . TGME49_232060 303 GEASRYR|AW 0.121 . TGME49_232060 306 SRYRAWR|GE 0.292 . TGME49_232060 311 WRGELAR|DK 0.154 . TGME49_232060 313 GELARDK|AT 0.084 . TGME49_232060 324 GNDETLK|VQ 0.055 . TGME49_232060 342 DVVATGK|DS 0.071 . TGME49_232060 354 VVAGPLK|NG 0.053 . TGME49_232060 367 ASELLQK|AD 0.064 . TGME49_232060 395 TNLDLSR|DA 0.113 . TGME49_232060 400 SRDALWR|VA 0.119 . TGME49_232060 411 AGAGMAR|AI 0.152 . TGME49_232060 461 VAEAIQR|AA 0.093 . TGME49_232060 468 AAAVANK|L- 0.063 . ____________________________^_________________

  • Fasta :-

    >TGME49_232060 ATGTGGGCGGGCAGCGGCGTGGCATTTTTGTGCCACGTGGAAAAATCTGCTTTGCAGGAG TTGGAGAGCGAAACTGCTTCGTCCCCTGACGTGAAGCGACAACACGAACTGCCCCGGACC CCAGACCGTGGAGAAAAAGCCACAGAACAAGCTGAGGATAAATTCGTCACTGGCGCCTCC TTCTTTGCCTTCGACCGCCCCCTCGCAGCCGTCGGCCGCCTTTTCGGCTCTGCGCCGGCA ACGCGAGACTTCTCAGTAGTTCAAATAGGTAACTCTGTCCAGAGCATCCACGGCCTTCTC CTCGGTGGCGGCAGCGTCTTCGGCCTAGACGCAGTTGGAGGTCTCGTTGAATTCCAGCGC AAGCGTGGCATCGGCGTCTCGACGATTGCAGGGCCCATTCCCGTCTGTCCAGCGCTTGGC ATTTTTGACGTCCCCGCTCTCGCACCTGATTCCTCGTTTCCTGCCAGCTCTGCATGTGCG CTTCCCCAATTCGTCAAATCCGAGGACGTCGCCACTGCATGCGCTGAAGCGGAGCGCCGA CGGGTGGCTGGACCGGCATCGGCTCCCGAGAGCGACTCCGGGGACAGACGACGCGAAAGG GGGGGGGAGAAGGAAAGGTCTGTCCCCCCGGCGGTCGCGCCTCTTCGAGTTCGTTGTCGG TTCCACTCCAGTGGGTCAGTCTCTACTGTCGTCGCTGCATCTGCGCCCTCCGAACAGGCC TCTCCGGCTTCTGCCGGCACTTCGCGTGAGGAGATAGATCCGGTCCCTGTTCTCTCTACT TTACCGGAGGAGACCGTCTCCTGGATAGGATCTGTTGGGGTCGGAGTGGGAGCGACCTGC GCCCGAGTCGGCGAGTGCGCGGGGTTCGCGCCACGGAAAGGAGGCTGGGGCGAGGCCTCT CGGTACCGGGCCTGGCGGGGTGAGCTTGCGAGAGACAAAGCGACAGGGACCGGCAACGAT GAAACGCTCAAAGTTCAGGCCTTCGTCGTCGTCAACAGTTACGGAGACGTCGTCGCTACA GGGAAGGACAGCGAGAACGCCGTTGTCGCAGGTCCCCTCAAAAACGGCGTCACATTCGCA GCCTCTGAGCTCCTTCAAAAAGCAGACCATACCTTCCTACCTCTGAGCCTCCAGCCACAA GCGACAACTCTGGTCGCCGTCTTCACCAACTTGGACTTGAGTCGTGACGCCCTCTGGCGT GTAGCTGCGATGGCGGGTGCTGGCATGGCTCGGGCAATTCACCCTGTCTTCTCCCCCGTT GACGGGGACGCTGTCATCGCCGTCTCCACTGGAGAGCTTACTCATGGCGACACCGACCCG ACGCTTTCGGAGATCATCGTAGGAACCATGGCTGCAGAATGCGTGGCTGAAGCTATCCAA CGAGCCGCGGCAGTCGCAAACAAACTGTGAAAGTGATCGTCGAAATTGCATTCGAATACA ACAGCTGCGCACTCAAAGCGTTTGCTGTTTCGTCTTGTGCTTGGGAAAGGGTATTGGCGA TCCCGTGTCGAAAACATTGGCGTGGTTGCTCACCCACGTGAACTATATTGACCAAGAATC GAGATTAAAATCCGCCGGTGCGCAGATGTTGATCGGTGGATGTGTGGAAAAAAAGGCCTA CACGCGCGTGTGTCCGTCGTGGCGCCTCTCGCGACATCTTTATTTTGAACAAATTACGTC TGCGACAACAACTACGGACGAGTAGCTCTCGGCGGGAGGAAACACCAATTCGAGATTACC ACCGTTAATGAAAGAATCCTCACTCACA
  • Download Fasta

  • Fasta :-

    MWAGSGVAFLCHVEKSALQELESETASSPDVKRQHELPRTPDRGEKATEQAEDKFVTGAS FFAFDRPLAAVGRLFGSAPATRDFSVVQIGNSVQSIHGLLLGGGSVFGLDAVGGLVEFQR KRGIGVSTIAGPIPVCPALGIFDVPALAPDSSFPASSACALPQFVKSEDVATACAEAERR RVAGPASAPESDSGDRRRERGGEKERSVPPAVAPLRVRCRFHSSGSVSTVVAASAPSEQA SPASAGTSREEIDPVPVLSTLPEETVSWIGSVGVGVGATCARVGECAGFAPRKGGWGEAS RYRAWRGELARDKATGTGNDETLKVQAFVVVNSYGDVVATGKDSENAVVAGPLKNGVTFA ASELLQKADHTFLPLSLQPQATTLVAVFTNLDLSRDALWRVAAMAGAGMARAIHPVFSPV DGDAVIAVSTGELTHGDTDPTLSEIIVGTMAAECVAEAIQRAAAVANKL

  • title: active site pocket
  • coordinates: G140,I141,F142,V330,N332,T382,D421,G422
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_232060248 SSAGTSREEI0.997unspTGME49_232060418 SHPVFSPVDG0.997unsp

TGME49_032060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India