TGME49_237150 | minor histocompatibility antigen h13, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_237150OTHER0.9987030.0011260.000171
No Results

  • Fasta :-

    >TGME49_237150 MGRTEAAAAAAAPQAHKSERRLFYGCFALLGATMAVSHFLALPVLLQMVVYTFPIVYIGS HASLRQNEVDEVTGEKSNKGEAMNHTDAMLFPVFGSVALFSLYVAYKFLDASWVNFLLTL YLTAIGLLALGETLHVALFPLFPDWAKDESRLAFKLCLPHIPVLYPRPSLETESEREAYE ASCMHRFSYSQLAAYLVAAALSALWLWKKHWALHNLLGIAFCIQAISLVSVGNFTVATIL LSGLFIYDIFWVFGTDVMVTVAKSFEGPAKLIFPVSIHPWQHSILGLGDIVIPGVFISMC LRFDYSLATASVTNGNAAKTTTVGASIDIHQKFSKFYFFVVSIFYEFGLLTTGVIMLVFQ HPQPALLYIVPFCLFSLFGAAALNGQVKEVLAYREDEEEKPAEVEGESEMKEEKKRK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_237150.fa Sequence name : TGME49_237150 Sequence length : 417 VALUES OF COMPUTED PARAMETERS Coef20 : 3.983 CoefTot : -0.328 ChDiff : -7 ZoneTo : 67 KR : 5 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.088 2.135 0.428 0.784 MesoH : 1.023 1.338 0.020 0.566 MuHd_075 : 23.628 25.996 7.227 6.064 MuHd_095 : 30.935 20.765 8.814 6.944 MuHd_100 : 28.063 21.107 8.917 6.796 MuHd_105 : 27.005 19.739 8.130 6.637 Hmax_075 : 15.200 24.033 3.946 7.320 Hmax_095 : 6.388 14.000 3.983 4.296 Hmax_100 : 7.500 15.000 1.927 4.670 Hmax_105 : 4.100 21.467 2.088 4.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7499 0.2501 DFMC : 0.6033 0.3967
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 417 TGME49_237150 MGRTEAAAAAAAPQAHKSERRLFYGCFALLGATMAVSHFLALPVLLQMVVYTFPIVYIGSHASLRQNEVDEVTGEKSNKG 80 EAMNHTDAMLFPVFGSVALFSLYVAYKFLDASWVNFLLTLYLTAIGLLALGETLHVALFPLFPDWAKDESRLAFKLCLPH 160 IPVLYPRPSLETESEREAYEASCMHRFSYSQLAAYLVAAALSALWLWKKHWALHNLLGIAFCIQAISLVSVGNFTVATIL 240 LSGLFIYDIFWVFGTDVMVTVAKSFEGPAKLIFPVSIHPWQHSILGLGDIVIPGVFISMCLRFDYSLATASVTNGNAAKT 320 TTVGASIDIHQKFSKFYFFVVSIFYEFGLLTTGVIMLVFQHPQPALLYIVPFCLFSLFGAAALNGQVKEVLAYREDEEEK 400 PAEVEGESEMKEEKKRK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_237150 3 ----MGR|TE 0.080 . TGME49_237150 17 AAPQAHK|SE 0.066 . TGME49_237150 20 QAHKSER|RL 0.123 . TGME49_237150 21 AHKSERR|LF 0.127 . TGME49_237150 65 GSHASLR|QN 0.131 . TGME49_237150 76 DEVTGEK|SN 0.068 . TGME49_237150 79 TGEKSNK|GE 0.069 . TGME49_237150 107 SLYVAYK|FL 0.085 . TGME49_237150 147 LFPDWAK|DE 0.063 . TGME49_237150 151 WAKDESR|LA 0.092 . TGME49_237150 155 ESRLAFK|LC 0.065 . TGME49_237150 167 IPVLYPR|PS 0.089 . TGME49_237150 176 LETESER|EA 0.093 . TGME49_237150 186 EASCMHR|FS 0.138 . TGME49_237150 208 SALWLWK|KH 0.061 . TGME49_237150 209 ALWLWKK|HW 0.080 . TGME49_237150 263 VMVTVAK|SF 0.084 . TGME49_237150 270 SFEGPAK|LI 0.076 . TGME49_237150 302 FISMCLR|FD 0.082 . TGME49_237150 319 TNGNAAK|TT 0.075 . TGME49_237150 332 SIDIHQK|FS 0.065 . TGME49_237150 335 IHQKFSK|FY 0.084 . TGME49_237150 388 ALNGQVK|EV 0.088 . TGME49_237150 394 KEVLAYR|ED 0.088 . TGME49_237150 400 REDEEEK|PA 0.076 . TGME49_237150 411 EGESEMK|EE 0.056 . TGME49_237150 414 SEMKEEK|KR 0.058 . TGME49_237150 415 EMKEEKK|RK 0.090 . TGME49_237150 416 MKEEKKR|K- 0.217 . TGME49_237150 417 KEEKKRK|-- 0.111 . ____________________________^_________________

  • Fasta :-

    >TGME49_237150 GCGAGAGGGCAGAGAAGGGAAAATGCAGAGACGAGGGAAGGAGAGGAGCACAAAGAGGGG AAGGCAGAAAATGCAGGCGCAGCAGCTGAGAGCTGAGGGAGGGCAGGTCGCCTCCCTGCC CCGGCAGCGGAAGGGAGGGCGGTTTTCGATGCGGCGTTAAGAGAGAGCAGGGGACAGCGA GAAGAGAAAACAGAGGCGAGAAGGTTTTCAGAAGACGAAGAGGAGAGAGAAGATCGAGAG AGACAGAGAGAGAGAGGTCGTAGAGGGGAGAAGGAAACCGATATCGAGTCGCATGCGTCA CACACGGAGGCAGGAGTGAGAGAGGTGAGGGAGGCTTGGGGTGTTCTTTCGAAACTTACC ACCTTTTTGACTCGTCTCTTTTGCTTTTCTCTGACGTCTGCCTGTCGTTTACACCACTTG AAAACCGAGACGCTCGAGAATCTGGAGGCTTAACTCTCTGAAGCTGAGAAAGGAGAGCAT GAGCATGCATGATGGAGCTCGGCGCGGCGCGGAGAGAAGACACTTGCGCGGTTGAGACCG AAGACGAGGAGGAGGGGCGAGTGGTGGGCGGCCTGGGGAAAAAACTCGCGAAAAGCGCCG CCTTGCCTTTCTCTCTCGTAGCGCCGTTTGTGTGTCGAAAAGTCTTTCTCTGGTGTGTCG CGTTGTTTTTTGCCGTAGATTCGCTCCCTTTTCCCAACTTTTCTCCCCTCCCAGGAAACG CGCGAGAAGCGAACTTCTTTTTTCGGATTCTCTCTTCCTCTCTTTTTCACCCTTTCTCTG CGCTCCTTCTTCCATCTCTGTTTCTCCTCCTCGCTTGGCCGCGCCCAGATAGTTCTCGCC TGAGTTTTCCTGAGAAAACCTCGGGAACTCTCGGCGCACCTGCTGGTCCGGACTTTTTGA GATTTTCAGACTGGTTTTCCTGCCCTCGCTCTGCCCCCCTTTGCTGCGCGCCGCTCTCGA GGTCGACGTAGACGCTCGGACCCTCCGAAAGGCGCGTCTCTCTGAGAGAGTCGTCCTGCT CTTTTCTTCTGTCGTCTCTCGCTTCCGCGTCCGTCCCTCCCGGCCTCCTCTCTTTCCACC ACAAACACACACACTCACACAGCCACCTACGCATATTCGCTTGCAGGGGATCTGGTTTTC TTTTTTCTCCGTAGCCTTTTTTCGCGGAGCGTCCTCGCGCTTCGTTCCACGCTTTTGCGT TTCTCCGTTGCCGCCAAGATGGGCCGGACCGAGGCTGCAGCAGCTGCAGCAGCGCCACAG GCGCACAAGTCGGAGAGGCGGCTCTTTTACGGCTGCTTCGCGCTGCTTGGAGCGACGATG GCCGTGTCGCACTTCCTCGCGCTTCCGGTCCTTCTGCAAATGGTCGTTTACACCTTTCCG ATCGTCTACATTGGCAGTCACGCCTCGCTGAGGCAGAACGAAGTCGACGAGGTCACCGGA GAAAAGTCGAACAAGGGCGAGGCGATGAACCACACGGACGCGATGCTCTTCCCCGTCTTC GGCTCTGTCGCGCTCTTCAGCTTGTACGTCGCCTACAAGTTCCTCGACGCGTCCTGGGTG AACTTCCTGCTCACTCTGTACCTGACGGCGATCGGGCTGCTGGCTCTCGGCGAAACGCTT CATGTCGCTCTCTTTCCGTTGTTTCCGGACTGGGCGAAGGACGAGTCTCGTCTGGCCTTC AAGCTTTGTTTGCCGCACATTCCCGTGCTCTACCCGCGTCCGAGTCTCGAGACAGAGAGC GAGAGAGAGGCGTACGAAGCTTCTTGCATGCACCGCTTTTCCTACAGCCAACTCGCCGCG TACCTCGTCGCCGCTGCCTTGTCTGCTCTCTGGCTATGGAAGAAGCACTGGGCGCTGCAC AACCTGCTCGGCATCGCCTTCTGCATTCAGGCCATCAGCCTCGTGAGTGTGGGGAACTTC ACGGTCGCGACGATCCTTCTCTCGGGACTCTTCATATACGACATCTTCTGGGTGTTCGGC ACTGACGTCATGGTCACTGTGGCCAAGTCTTTCGAGGGTCCGGCGAAGCTGATTTTCCCT GTCAGTATCCACCCGTGGCAGCACAGCATTCTCGGCTTGGGAGACATTGTCATTCCGGGA GTCTTCATCTCCATGTGTCTCCGCTTCGACTACTCGCTGGCCACGGCTTCCGTCACAAAC GGAAACGCGGCGAAAACGACCACTGTCGGCGCGTCGATCGACATCCACCAGAAATTCAGC AAATTCTACTTCTTTGTCGTTTCCATTTTCTACGAGTTCGGACTCTTGACGACCGGAGTT ATCATGCTGGTTTTCCAGCACCCGCAGCCTGCTCTCCTGTACATTGTTCCCTTCTGCCTC TTCTCACTCTTCGGCGCTGCGGCTCTCAACGGCCAAGTGAAAGAAGTCTTGGCTTACCGC GAAGATGAAGAGGAGAAGCCTGCAGAGGTCGAGGGAGAGTCTGAGATGAAGGAAGAGAAG AAGCGCAAATGATCGGAGAAGGCCGCGCCGCGAGAGAACATGAAAAAGAAGAGACCGTGT CGAGACGGAAACAAGGAAGAACAGAGACAGAGCGAAAGAGACAATGAAGAAGGAACGGGA GGACACCGAACGAATGAACCCGGCTGTCTCTCTCGCCATGGAGATGTCAAAGCGTCCCGG AGCTCAGGTGTATGTACACCCTGGAGAGCTGAGGCGTACACGCAACGTCCGAGAGAGTTA CCGGTGTGCATGCAGCGATCGACGTTCGTGGCGACTGGAGCTCCTGTACCATTTCTGCAT GCGTGCGAATTCGATAGGACCTCCTTTTTTCAATGTGTTCTAACCCCCTACTAAGATAAG CACTTCTCCGCCTACGCTCGACGTAGATGCATGCCTGTATGAAGATATATCTACATGCGT GTACATACGTATGTGCATACACACATATATATATATATATATATATATATGTATTGTCGA GGGAAAGAAAGGCTTCGCTGGATTTCAAAAGCCTTTCTTGTGCGCCGTACGTGGACGTCC TCCGCTCTTTTGCTGTCCGGAGTCTCTCCGTGCTCCCGTCTCTGACATTCCGGTGTCTCT GCTCTGCGTATGTTTCTATGGTCGGGTCTTTCTTTCTGCGTGGCGCTTTTTCTGCAAGGG ACAACGCGCTCCGAGTGTCTCGTATCTCAACTCTGAGTTTGTAGAGTGGAGGAAATTTTT TAATCCGTTTACTGGACGTTGTTTACGAAGACTCTCCAAAGAAAGATACGCGAATGTCTC CCGCGAGCTCCACGTGTTATTCCGCGTTCAGCGTCTGGGGTTTCCTCTGCCACTCTCCCG CAGAACAAAAGGGCAGCCTCGGCCCCCGACTCATACGTGGGTGCGCTACAACACACACAG CCTGCTACAACTCTACAGAC
  • Download Fasta

  • Fasta :-

    MGRTEAAAAAAAPQAHKSERRLFYGCFALLGATMAVSHFLALPVLLQMVVYTFPIVYIGS HASLRQNEVDEVTGEKSNKGEAMNHTDAMLFPVFGSVALFSLYVAYKFLDASWVNFLLTL YLTAIGLLALGETLHVALFPLFPDWAKDESRLAFKLCLPHIPVLYPRPSLETESEREAYE ASCMHRFSYSQLAAYLVAAALSALWLWKKHWALHNLLGIAFCIQAISLVSVGNFTVATIL LSGLFIYDIFWVFGTDVMVTVAKSFEGPAKLIFPVSIHPWQHSILGLGDIVIPGVFISMC LRFDYSLATASVTNGNAAKTTTVGASIDIHQKFSKFYFFVVSIFYEFGLLTTGVIMLVFQ HPQPALLYIVPFCLFSLFGAAALNGQVKEVLAYREDEEEKPAEVEGESEMKEEKKRK

    No Results
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No Results
IDSitePeptideScoreMethod
TGME49_237150174 SLETESEREA0.994unsp

TGME49_037150      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India