-
Computed_GO_Component_IDs:
-
Computed_GO_Components:
-
Computed_GO_Function_IDs:
-
Computed_GO_Functions:
-
Computed_GO_Process_IDs:
-
Computed_GO_Processes:
-
Curated_GO_Component_IDs:
-
Curated_GO_Components:
-
Curated_GO_Function_IDs:
-
Curated_GO_Functions:
-
Curated_GO_Processes:
No Results
-
Fasta :-
>TGME49_237893
MVLSSGWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELNLESETKVNYRVHATL
QGDICWTPSTASEEFDPESHSCADDAVIVSSFGSRVDAAELDLDRDADIVYDSAYEADNE
EDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATTNFVASTQTGEDFSGDEWEIP
EEISPAEGMTTRTPTPPGGSPGDCCGDGNEKKSSVDSQPSTRRSNPCVNL
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_237893.fa
Sequence name : TGME49_237893
Sequence length : 230
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.801
CoefTot : 0.462
ChDiff : -37
ZoneTo : 26
KR : 2
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.288 0.865 0.025 0.249
MesoH : -1.411 -0.264 -0.573 0.023
MuHd_075 : 26.027 16.004 7.482 4.796
MuHd_095 : 37.687 28.000 11.417 9.893
MuHd_100 : 36.242 25.173 10.777 9.245
MuHd_105 : 37.585 20.926 10.899 8.222
Hmax_075 : 14.000 20.883 6.405 4.650
Hmax_095 : 16.625 21.350 6.198 6.458
Hmax_100 : 18.000 21.700 6.460 6.900
Hmax_105 : 13.700 17.100 5.546 5.620
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.3031 0.6969
DFMC : 0.3424 0.6576
This protein is probably imported in mitochondria.
f(Ser) = 0.1538 f(Arg) = 0.0769 CMi = 0.86580
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
-
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
230 TGME49_237893
MVLSSGWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELNLESETKVNYRVHATLQGDICWTPSTASEEFDPESH 80
SCADDAVIVSSFGSRVDAAELDLDRDADIVYDSAYEADNEEDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATT 160
NFVASTQTGEDFSGDEWEIPEEISPAEGMTTRTPTPPGGSPGDCCGDGNEKKSSVDSQPSTRRSNPCVNL 240
................................................................................ 80
................................................................................ 160
...................................................................... 240
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
TGME49_237893 8 VLSSGWR|AL 0.084 .
TGME49_237893 12 GWRALIR|CC 0.124 .
TGME49_237893 28 NVSASDK|QE 0.061 .
TGME49_237893 38 APSFVGR|VD 0.173 .
TGME49_237893 51 NLESETK|VN 0.064 .
TGME49_237893 55 ETKVNYR|VH 0.081 .
TGME49_237893 95 VSSFGSR|VD 0.089 .
TGME49_237893 105 AELDLDR|DA 0.111 .
TGME49_237893 138 DADESPR|SS 0.122 .
TGME49_237893 192 AEGMTTR|TP 0.086 .
TGME49_237893 211 CGDGNEK|KS 0.052 .
TGME49_237893 212 GDGNEKK|SS 0.222 .
TGME49_237893 222 DSQPSTR|RS 0.085 .
TGME49_237893 223 SQPSTRR|SN 0.170 .
____________________________^_________________
-
Fasta :-
>TGME49_237893
ATGGTGCTCTCAAGTGGATGGCGTGCTCTGATACGCTGTTGTCAGCCGGTGCTCGCGACC
CCTAACGTGAGTGCCTCTGACAAGCAAGAGCTTGCTCCCTCCTTCGTCGGCCGCGTCGAC
GAAGAGGAACTAAACTTGGAGTCAGAGACCAAAGTAAACTACCGCGTCCATGCTACACTG
CAAGGAGACATCTGCTGGACACCGAGTACGGCGAGCGAGGAGTTCGACCCGGAGTCCCAC
TCTTGCGCTGACGATGCAGTCATTGTTTCGTCATTTGGGAGCCGAGTCGACGCCGCGGAA
CTGGATCTGGACCGAGACGCTGACATCGTCTATGATTCTGCGTACGAAGCAGACAACGAA
GAAGACGCGTGGTCAGAAACAGGGTCGGAAGAAGACGCGGACGAATCTCCTAGAAGTAGC
GAGGTCTTGACTCAAGCTGACGAAGATGGCCAGAGTTTCGAAGGAGACCTTGCTACTACG
AACTTCGTCGCGTCGACGCAGACAGGCGAAGACTTCTCTGGAGACGAATGGGAAATTCCT
GAGGAGATTTCACCAGCAGAGGGGATGACGACGAGGACACCAACCCCTCCCGGAGGATCA
CCGGGAGATTGCTGCGGAGATGGAAATGAGAAAAAATCTTCGGTCGATTCGCAGCCCTCC
ACGAGAAGGAGCAACCCGTGTGTCAATCTCTGA
- Download Fasta
Loading, please wait...
| ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
| TGME49_237893 | 129 S | SETGSEEDA | 0.996 | unsp | TGME49_237893 | 129 S | SETGSEEDA | 0.996 | unsp | TGME49_237893 | 129 S | SETGSEEDA | 0.996 | unsp | TGME49_237893 | 136 S | DADESPRSS | 0.996 | unsp | TGME49_237893 | 173 S | GEDFSGDEW | 0.992 | unsp | TGME49_237893 | 200 S | PPGGSPGDC | 0.993 | unsp | TGME49_237893 | 213 S | NEKKSSVDS | 0.995 | unsp | TGME49_237893 | 217 S | SSVDSQPST | 0.991 | unsp | TGME49_237893 | 72 S | PSTASEEFD | 0.992 | unsp | TGME49_237893 | 113 S | IVYDSAYEA | 0.994 | unsp |