TGME49_242290 | proteasome subunit alpha1, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_242290OTHER0.9999180.0000460.000036
No Results

  • Fasta :-

    >TGME49_242290 MAGRSTQAMYDRHITIFSPDGNLYQVEYAMKAVRNCNLTCVAIKGDDSACLVVQKKVAAH QLTQDKHLDSSFVSSLYTLSPTIGSCLVGVFPDCRSIAFRARQEAGEFAYKNGYDMPVYA LAKRIADINQVYTQFAYMRLHACTGIMISYDEEAGPSIYKFDPAGFFAGYKACASGTKEQ EATNILEKMVKKRSRTTPKEVIECAISAMQHVLAMDFKASDIEVGVVTKDQPAFRILSEH EVEDHLTSIAERE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_242290.fa Sequence name : TGME49_242290 Sequence length : 253 VALUES OF COMPUTED PARAMETERS Coef20 : 3.929 CoefTot : -0.033 ChDiff : -3 ZoneTo : 10 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.629 1.300 0.322 0.552 MesoH : -0.583 0.333 -0.301 0.170 MuHd_075 : 12.898 4.354 3.748 1.881 MuHd_095 : 31.617 13.699 5.382 6.590 MuHd_100 : 26.678 11.792 4.742 5.980 MuHd_105 : 18.536 6.850 3.589 4.122 Hmax_075 : 12.833 6.417 0.764 3.162 Hmax_095 : 12.250 7.175 -0.397 3.386 Hmax_100 : 10.600 6.600 -0.590 3.670 Hmax_105 : 8.700 4.550 -0.861 3.530 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8193 0.1807 DFMC : 0.7764 0.2236
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 253 TGME49_242290 MAGRSTQAMYDRHITIFSPDGNLYQVEYAMKAVRNCNLTCVAIKGDDSACLVVQKKVAAHQLTQDKHLDSSFVSSLYTLS 80 PTIGSCLVGVFPDCRSIAFRARQEAGEFAYKNGYDMPVYALAKRIADINQVYTQFAYMRLHACTGIMISYDEEAGPSIYK 160 FDPAGFFAGYKACASGTKEQEATNILEKMVKKRSRTTPKEVIECAISAMQHVLAMDFKASDIEVGVVTKDQPAFRILSEH 240 EVEDHLTSIAERE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_242290 4 ---MAGR|ST 0.144 . TGME49_242290 12 TQAMYDR|HI 0.109 . TGME49_242290 31 QVEYAMK|AV 0.074 . TGME49_242290 34 YAMKAVR|NC 0.070 . TGME49_242290 44 LTCVAIK|GD 0.065 . TGME49_242290 55 ACLVVQK|KV 0.080 . TGME49_242290 56 CLVVQKK|VA 0.132 . TGME49_242290 66 HQLTQDK|HL 0.069 . TGME49_242290 95 GVFPDCR|SI 0.104 . TGME49_242290 100 CRSIAFR|AR 0.137 . TGME49_242290 102 SIAFRAR|QE 0.108 . TGME49_242290 111 AGEFAYK|NG 0.059 . TGME49_242290 123 PVYALAK|RI 0.065 . TGME49_242290 124 VYALAKR|IA 0.216 . TGME49_242290 139 TQFAYMR|LH 0.088 . TGME49_242290 160 AGPSIYK|FD 0.064 . TGME49_242290 171 GFFAGYK|AC 0.061 . TGME49_242290 178 ACASGTK|EQ 0.061 . TGME49_242290 188 ATNILEK|MV 0.075 . TGME49_242290 191 ILEKMVK|KR 0.061 . TGME49_242290 192 LEKMVKK|RS 0.095 . TGME49_242290 193 EKMVKKR|SR 0.339 . TGME49_242290 195 MVKKRSR|TT 0.101 . TGME49_242290 199 RSRTTPK|EV 0.091 . TGME49_242290 218 VLAMDFK|AS 0.075 . TGME49_242290 229 EVGVVTK|DQ 0.065 . TGME49_242290 235 KDQPAFR|IL 0.126 . TGME49_242290 252 LTSIAER|E- 0.102 . ____________________________^_________________

  • Fasta :-

    >TGME49_242290 AGTTTTTTCGGTCGTTTGCTGGTGTGTATGTACACCGAAGTCTTCACCTCGAGAAGTCCT TCTTTCCATACGAAGCGATTTCCTTTCTTTGTCTTCCACATCGTCGGAATACCGTGGTGG ACGCTCTCTGCACTCACTCGCTTTTTCCACCTCTGTCGGCGGTCGCCTTCCGAGTCCTCG GAGAGCAAATACTTTTCCCGTTCTCTTCTACCTCTTCGGTTCGCTTTTTTCTGGACATGT CCTTCGGAGTCGAATCAAGGGGACAGACACAGAGAACTCCGTTTTCTATCATTTCTCTGT GACGCGTTCTGCCCTTTGCTGCTCGTCTTTGCCTTCCTGTCTCCACGCGCCTACACACAG CAAGCCACGTACAAACAGAAGTGAATCGGCACTCGGTTTCCCCGTTTCTGTCATTATCCC CTTTGTCGTTGAAAACGTGAGACGATTCGTTCTCGCGTCCTCTTGGTTTTCGTTCTCCGC AACTCTTCTCGACGCACCAAAAACCGGTGTACGTACACTTCGGCAGACAGATCCGACGTC CGGTATTCGATACTGTTTGCATCCTTTCCCTCGTTTTCGGGTTTGTTGCTCTTGAATCTC CTTTCTCTTCGTGGAAGTTCCGCTCTTCTGTCGTCCGTGGCAACGCTGACGAGGACATCT TTCCCCCTCTGCGACATCTCGATTATCCACTCTCATTCGTCTCAGTCGAGAGAGTTCGAC CTCAGGTTTTTGACAGACCTTCGCAAAAATGGCAGGCCGTAGCACCCAGGCGATGTACGA TCGCCACATCACCATTTTCTCGCCGGACGGGAACTTGTACCAAGTCGAGTACGCGATGAA GGCAGTGCGCAACTGCAACTTGACTTGCGTCGCGATCAAGGGCGACGACAGCGCATGCCT GGTTGTTCAGAAGAAGGTCGCCGCGCACCAGTTGACTCAAGACAAACACCTCGACAGCTC CTTCGTCTCTTCTCTTTACACTCTCTCCCCGACCATCGGCAGCTGTCTCGTGGGAGTTTT CCCTGACTGCCGCAGCATTGCCTTTCGCGCGCGACAGGAAGCAGGAGAGTTCGCTTACAA GAACGGCTACGACATGCCGGTCTACGCCCTCGCGAAGCGGATCGCGGACATCAATCAGGT GTACACACAGTTCGCCTACATGCGTCTCCATGCATGCACTGGCATTATGATATCCTACGA CGAAGAAGCTGGTCCGTCCATCTACAAATTCGACCCTGCAGGTTTCTTTGCGGGCTACAA GGCGTGCGCATCGGGGACGAAAGAGCAGGAGGCGACAAACATTCTGGAGAAGATGGTGAA GAAGCGCTCTCGCACAACCCCGAAAGAGGTGATTGAATGCGCCATTTCGGCGATGCAGCA CGTCCTCGCCATGGATTTCAAGGCCTCCGACATCGAAGTCGGTGTTGTCACGAAAGACCA ACCTGCCTTCAGGATCTTGTCGGAGCACGAAGTCGAGGACCACTTGACGTCAATCGCTGA GAGGGAGTAGTGGATCTCACACTTCTGCTAGCCTCTCCTCTGGAAAATATCATCTGTCAC GCTTGTGGCGGGTTCGTCGCGTTCTCGTGTGTTTCCCACGGCACATGCCTGTAGGGGTTT TGTGTGTATAGGATCAATGGATGGTTGGCTGTGACTGTTCCTACCCTTCGGACACGTATA CAGATGTATGTGTGTCCACGAGGGAGGTATACACAAGCATCTTGTAATGCATGTGAGTTT TTAGAGTCTTGTTCCAGATTCGGGACACGAGTGAAGAGTTTGTGTTCAAAATACTAGAAC TTCTACGGAGGAACAGAAACCAAACGTCTGAAAAAGGAGACGAAGGAGAAGAAAAGGAAG TCCATCGCGGCTTGGTTTTTCCAGGTCAACGGAGGAAAAAGGAAAGAACACAAGTCCCGG AGTCGAGCCGCAGTTTAGAAGCAGCGGCAGTGTATCTTGTGTTTTGATTCCCGTTGAGAG TTTCTTTCATTTCCTTCTCGCGTCTGTCGAACCAAGAGTAGCCGGCAATATCTTGCCGTT CTAGCGCACAAAAAAAT
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  • Fasta :-

    MAGRSTQAMYDRHITIFSPDGNLYQVEYAMKAVRNCNLTCVAIKGDDSACLVVQKKVAAH QLTQDKHLDSSFVSSLYTLSPTIGSCLVGVFPDCRSIAFRARQEAGEFAYKNGYDMPVYA LAKRIADINQVYTQFAYMRLHACTGIMISYDEEAGPSIYKFDPAGFFAGYKACASGTKEQ EATNILEKMVKKRSRTTPKEVIECAISAMQHVLAMDFKASDIEVGVVTKDQPAFRILSEH EVEDHLTSIAERE

  • title: active site
  • coordinates: L38,Q54,K56,S75,T177
No Results
No Results
IDSitePeptideScoreMethod
TGME49_242290197 TRSRTTPKEV0.998unsp

TGME49_042290      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India