TGME49_243510 | OTU family cysteine protease

  • Computed_GO_Component_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_243510OTHER1.0000000.0000000.000000
No Results

  • Fasta :-

    >TGME49_243510 MENSAASSWGPGAEPSESESEEGGGSRRKLLQKQRKEIKDLQAASKRAIAGAKMKGEKQR LELEFRQKEADLVAAHKRQLAALSKNAEKAESEEAKQEINGEREETENAGVFAEKTTVAA GAASASQGRDTGAPTAGVTASPGDSADAVVNAFASLRLYGGDGAREPAKLSKAQQRRRKK RTEDEAREEALRLEREEAGPDPGQVEWELLRTHLQKRNLAIHSIAADGHCMYRGVCHQLQ QISPQGVEFAPEHPATWAVEQLRDKVADFLEANREEFQPFLDDSAQTEQGFANYCGKIRN TAEWGGEVELQVIAKVLQRRIQVATMNQGEFLLLTYGEEFPEESSPLRLTFHRHLLAAGG HYNSVVPASSKTSDSDVE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_243510.fa Sequence name : TGME49_243510 Sequence length : 378 VALUES OF COMPUTED PARAMETERS Coef20 : 3.155 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.476 0.788 -0.098 0.364 MesoH : -0.992 -0.106 -0.477 0.098 MuHd_075 : 15.324 8.892 4.087 3.188 MuHd_095 : 23.761 10.940 6.088 3.250 MuHd_100 : 23.373 10.182 5.729 3.331 MuHd_105 : 15.331 6.732 3.475 2.734 Hmax_075 : 8.400 2.217 -0.084 3.033 Hmax_095 : 9.888 1.575 -0.245 2.301 Hmax_100 : 8.900 -0.100 -0.245 2.310 Hmax_105 : 0.100 -0.200 -2.475 2.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9863 0.0137 DFMC : 0.9712 0.0288
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 378 TGME49_243510 MENSAASSWGPGAEPSESESEEGGGSRRKLLQKQRKEIKDLQAASKRAIAGAKMKGEKQRLELEFRQKEADLVAAHKRQL 80 AALSKNAEKAESEEAKQEINGEREETENAGVFAEKTTVAAGAASASQGRDTGAPTAGVTASPGDSADAVVNAFASLRLYG 160 GDGAREPAKLSKAQQRRRKKRTEDEAREEALRLEREEAGPDPGQVEWELLRTHLQKRNLAIHSIAADGHCMYRGVCHQLQ 240 QISPQGVEFAPEHPATWAVEQLRDKVADFLEANREEFQPFLDDSAQTEQGFANYCGKIRNTAEWGGEVELQVIAKVLQRR 320 IQVATMNQGEFLLLTYGEEFPEESSPLRLTFHRHLLAAGGHYNSVVPASSKTSDSDVE 400 ................................................................................ 80 ................................................................................ 160 ....................P........................................................... 240 ................................................................................ 320 .......................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_243510 27 EEGGGSR|RK 0.063 . TGME49_243510 28 EGGGSRR|KL 0.144 . TGME49_243510 29 GGGSRRK|LL 0.094 . TGME49_243510 33 RRKLLQK|QR 0.066 . TGME49_243510 35 KLLQKQR|KE 0.084 . TGME49_243510 36 LLQKQRK|EI 0.129 . TGME49_243510 39 KQRKEIK|DL 0.080 . TGME49_243510 46 DLQAASK|RA 0.077 . TGME49_243510 47 LQAASKR|AI 0.227 . TGME49_243510 53 RAIAGAK|MK 0.084 . TGME49_243510 55 IAGAKMK|GE 0.073 . TGME49_243510 58 AKMKGEK|QR 0.059 . TGME49_243510 60 MKGEKQR|LE 0.097 . TGME49_243510 66 RLELEFR|QK 0.097 . TGME49_243510 68 ELEFRQK|EA 0.069 . TGME49_243510 77 DLVAAHK|RQ 0.058 . TGME49_243510 78 LVAAHKR|QL 0.190 . TGME49_243510 85 QLAALSK|NA 0.086 . TGME49_243510 89 LSKNAEK|AE 0.070 . TGME49_243510 96 AESEEAK|QE 0.100 . TGME49_243510 103 QEINGER|EE 0.077 . TGME49_243510 115 AGVFAEK|TT 0.070 . TGME49_243510 129 ASASQGR|DT 0.175 . TGME49_243510 157 NAFASLR|LY 0.089 . TGME49_243510 165 YGGDGAR|EP 0.073 . TGME49_243510 169 GAREPAK|LS 0.074 . TGME49_243510 172 EPAKLSK|AQ 0.065 . TGME49_243510 176 LSKAQQR|RR 0.092 . TGME49_243510 177 SKAQQRR|RK 0.180 . TGME49_243510 178 KAQQRRR|KK 0.153 . TGME49_243510 179 AQQRRRK|KR 0.200 . TGME49_243510 180 QQRRRKK|RT 0.421 . TGME49_243510 181 QRRRKKR|TE 0.807 *ProP* TGME49_243510 187 RTEDEAR|EE 0.075 . TGME49_243510 192 AREEALR|LE 0.068 . TGME49_243510 195 EALRLER|EE 0.120 . TGME49_243510 211 VEWELLR|TH 0.068 . TGME49_243510 216 LRTHLQK|RN 0.066 . TGME49_243510 217 RTHLQKR|NL 0.168 . TGME49_243510 233 DGHCMYR|GV 0.220 . TGME49_243510 263 WAVEQLR|DK 0.091 . TGME49_243510 265 VEQLRDK|VA 0.063 . TGME49_243510 274 DFLEANR|EE 0.062 . TGME49_243510 297 FANYCGK|IR 0.077 . TGME49_243510 299 NYCGKIR|NT 0.091 . TGME49_243510 315 ELQVIAK|VL 0.066 . TGME49_243510 319 IAKVLQR|RI 0.088 . TGME49_243510 320 AKVLQRR|IQ 0.129 . TGME49_243510 348 EESSPLR|LT 0.082 . TGME49_243510 353 LRLTFHR|HL 0.120 . TGME49_243510 371 VVPASSK|TS 0.058 . ____________________________^_________________

  • Fasta :-

    >TGME49_243510 GTTTTCTGTTTTCCAGGTGTCAATACACTCGTGCGGTTTCTTGATTGTCGGATGTTCTTG TTTTCCTGTCCGCCACCTTTTGTCGGTTTTCCCCTTTTCGGCGGTGTTCGACACTGCACA CATCTCGTCTTTGTTCGTTTGCCCGTTTTTCTGGGTTTTCTGTCACTTGCTTCCTCCGCA GTTTCCTTTCTCCCGTCGTGAAGCTGGCTCTCGATGTATCTGTCGCCCCTTCTCCCCCGT TTTTCCTCGGAAAGCATCAAACACGCACGAAGCACAGGCGAGACAGGAGACAGAGAGGAC GCTCGTCTTGAGTAGCGAAACGAGACAGAAAGAAGAAGAGAGAAGGAAAAAGAGGACCAG CAAGACGGATGAAAAGAAGGACAGGGAAGAAGAGGAGGAAGGCGAAGAAAAGGACGGCGA AAAACAGGAAGGAGGCACAGAAGTGAAGAGCGGAGAGGAAGGAGAAGGAAACTAGGACGA GGAAGATAACGGAGTGAAGAGAGAAAAGCGAGATGGAAAACAGCGCTGCGAGTTCGTGGG GACCTGGGGCAGAACCTTCGGAGAGCGAGAGCGAAGAGGGAGGAGGCAGTCGAAGAAAAC TTCTTCAGAAACAAAGAAAGGAGATCAAGGACCTGCAAGCGGCGAGTAAACGTGCGATTG CCGGGGCGAAGATGAAGGGAGAGAAGCAGCGCCTGGAGCTGGAGTTTCGGCAGAAGGAAG CAGACCTCGTTGCTGCGCACAAGAGACAGCTCGCAGCTTTGTCCAAGAATGCAGAGAAGG CAGAATCTGAGGAGGCGAAGCAGGAGATAAACGGAGAGCGAGAAGAGACAGAAAATGCAG GGGTCTTCGCGGAAAAAACCACTGTGGCTGCTGGGGCTGCCAGCGCCTCGCAGGGCCGAG ACACCGGCGCACCGACCGCGGGTGTCACCGCGTCGCCAGGCGATAGCGCGGACGCGGTCG TCAACGCCTTCGCTTCGCTGAGGCTGTACGGCGGCGACGGAGCCCGAGAGCCTGCAAAGC TTTCCAAGGCACAGCAGCGCAGAAGGAAGAAACGCACAGAAGACGAGGCGAGAGAAGAAG CTCTTAGGCTCGAACGAGAAGAGGCAGGTCCAGATCCGGGTCAAGTAGAGTGGGAGCTTC TGCGAACGCATCTGCAGAAGCGAAACCTCGCCATTCACTCCATCGCTGCTGACGGGCACT GTATGTACAGAGGCGTATGCCATCAGCTCCAACAGATTTCTCCGCAAGGCGTCGAGTTTG CACCCGAACATCCCGCGACTTGGGCTGTTGAACAGTTGCGGGACAAAGTTGCGGACTTTC TCGAAGCCAACCGCGAGGAGTTCCAGCCTTTCCTTGACGATTCAGCTCAAACTGAGCAAG GCTTCGCGAATTACTGCGGAAAGATCCGCAACACTGCTGAATGGGGAGGAGAAGTCGAGT TGCAGGTGATTGCCAAGGTTCTCCAGCGACGCATTCAAGTTGCCACAATGAATCAGGGAG AATTTCTCCTCCTCACTTATGGCGAGGAATTCCCTGAAGAGTCATCGCCATTGCGCCTTA CCTTCCATCGCCACCTCTTGGCAGCTGGTGGGCACTACAACTCAGTGGTGCCGGCTTCTA GCAAGACATCGGACTCTGATGTCGAATAAAGAGGCATTGACAGGGTTTTCCGAATGTTCT CCGTTCGGCTATTTCTTTCCACAATTTGCCCGCTTTTGTGTCCACAGGAGCCGCAATCGA TCTCAGTGAAAGATGTCAAGGACCACAGAATTCCCTCTAGTCAGGGTGAACTTCTTCGCT AGTGCCCGTGTGTTTCTCGTTGTTTCTGTAGTGCTCTGAGGTCATTATCCACGCATGCAT ACGTATATATATCTGTATATATATATATATTTGTGCGGGGAAAGATGGAGCCGAGTAGAT GGTAGAGCGACTTAGAGATAAGTAGAGATGTGAATTTAAATATTGTCTGCAGGGTATGCA TGCATCTCCTGTGCGT
  • Download Fasta

  • Fasta :-

    MENSAASSWGPGAEPSESESEEGGGSRRKLLQKQRKEIKDLQAASKRAIAGAKMKGEKQR LELEFRQKEADLVAAHKRQLAALSKNAEKAESEEAKQEINGEREETENAGVFAEKTTVAA GAASASQGRDTGAPTAGVTASPGDSADAVVNAFASLRLYGGDGAREPAKLSKAQQRRRKK RTEDEAREEALRLEREEAGPDPGQVEWELLRTHLQKRNLAIHSIAADGHCMYRGVCHQLQ QISPQGVEFAPEHPATWAVEQLRDKVADFLEANREEFQPFLDDSAQTEQGFANYCGKIRN TAEWGGEVELQVIAKVLQRRIQVATMNQGEFLLLTYGEEFPEESSPLRLTFHRHLLAAGG HYNSVVPASSKTSDSDVE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_243510141 SGVTASPGDS0.993unspTGME49_243510141 SGVTASPGDS0.993unspTGME49_243510141 SGVTASPGDS0.993unspTGME49_243510369 SVVPASSKTS0.993unspTGME49_243510373 SSSKTSDSDV0.996unspTGME49_24351018 SEPSESESEE0.993unspTGME49_24351020 SSESESEEGG0.994unsp

TGME49_043510      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India