TGME49_248850 | methionine aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
TGME49_248850OTHER0.9988290.0011670.000004
No Results

  • Fasta :-

    >TGME49_248850 MVDTAASADSARAPGDQVRCEGCAREVKPELLCPTCVKLGIQSSYFCSQSCFKENWKKHK DVHAVFKLLQKKNQEAETSAETDLAKFNPQDRNTWRNDPHLRNFLSFSFTGELRPWPILQ CMRSVPPHIQQPDYALSGVPQSELDSRRKSNVHVHSEEEIQRLRETCLLGRRALDYAHSL VKPGVTTEEIDAKVHAFIVDNGGYPSPLNYQQFPKSCCTSVNEVICHGIPDFRPLQDGDI VNIDITVFFKGMHGDLNETYCVGDNVDEDSKRLIKGAYECLMEAVKQCRPGMMYRDVGRI VSDVADKYNLSVVRSYCGHGIGELFHTTPNIPHYRRNKAIGVMKPGHVFTIEPMINAGKS GDLLWPDNWTACTIDGRRSAQFEHTLLVTETGVEILTKRLPCSPPLDFDASAYDNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_248850.fa Sequence name : TGME49_248850 Sequence length : 416 VALUES OF COMPUTED PARAMETERS Coef20 : 4.087 CoefTot : 0.000 ChDiff : -6 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.024 0.212 0.471 MesoH : -0.881 0.015 -0.445 0.164 MuHd_075 : 22.346 5.843 5.120 3.598 MuHd_095 : 16.575 6.620 4.160 3.225 MuHd_100 : 20.277 5.149 4.470 2.184 MuHd_105 : 29.754 12.963 6.109 3.921 Hmax_075 : 11.433 7.117 1.141 3.267 Hmax_095 : 0.175 4.638 -0.889 2.013 Hmax_100 : 12.000 7.800 1.349 3.230 Hmax_105 : 10.800 6.600 0.786 2.931 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7151 0.2849 DFMC : 0.7716 0.2284
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 416 TGME49_248850 MVDTAASADSARAPGDQVRCEGCAREVKPELLCPTCVKLGIQSSYFCSQSCFKENWKKHKDVHAVFKLLQKKNQEAETSA 80 ETDLAKFNPQDRNTWRNDPHLRNFLSFSFTGELRPWPILQCMRSVPPHIQQPDYALSGVPQSELDSRRKSNVHVHSEEEI 160 QRLRETCLLGRRALDYAHSLVKPGVTTEEIDAKVHAFIVDNGGYPSPLNYQQFPKSCCTSVNEVICHGIPDFRPLQDGDI 240 VNIDITVFFKGMHGDLNETYCVGDNVDEDSKRLIKGAYECLMEAVKQCRPGMMYRDVGRIVSDVADKYNLSVVRSYCGHG 320 IGELFHTTPNIPHYRRNKAIGVMKPGHVFTIEPMINAGKSGDLLWPDNWTACTIDGRRSAQFEHTLLVTETGVEILTKRL 400 PCSPPLDFDASAYDNL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_248850 12 ASADSAR|AP 0.190 . TGME49_248850 19 APGDQVR|CE 0.116 . TGME49_248850 25 RCEGCAR|EV 0.121 . TGME49_248850 28 GCAREVK|PE 0.089 . TGME49_248850 38 LCPTCVK|LG 0.054 . TGME49_248850 53 CSQSCFK|EN 0.067 . TGME49_248850 57 CFKENWK|KH 0.058 . TGME49_248850 58 FKENWKK|HK 0.108 . TGME49_248850 60 ENWKKHK|DV 0.171 . TGME49_248850 67 DVHAVFK|LL 0.071 . TGME49_248850 71 VFKLLQK|KN 0.061 . TGME49_248850 72 FKLLQKK|NQ 0.098 . TGME49_248850 86 AETDLAK|FN 0.070 . TGME49_248850 92 KFNPQDR|NT 0.101 . TGME49_248850 96 QDRNTWR|ND 0.090 . TGME49_248850 102 RNDPHLR|NF 0.077 . TGME49_248850 114 SFTGELR|PW 0.080 . TGME49_248850 123 PILQCMR|SV 0.167 . TGME49_248850 147 QSELDSR|RK 0.096 . TGME49_248850 148 SELDSRR|KS 0.138 . TGME49_248850 149 ELDSRRK|SN 0.098 . TGME49_248850 162 SEEEIQR|LR 0.085 . TGME49_248850 164 EEIQRLR|ET 0.070 . TGME49_248850 171 ETCLLGR|RA 0.081 . TGME49_248850 172 TCLLGRR|AL 0.104 . TGME49_248850 182 YAHSLVK|PG 0.058 . TGME49_248850 193 TEEIDAK|VH 0.065 . TGME49_248850 215 NYQQFPK|SC 0.102 . TGME49_248850 233 HGIPDFR|PL 0.089 . TGME49_248850 250 DITVFFK|GM 0.069 . TGME49_248850 271 NVDEDSK|RL 0.054 . TGME49_248850 272 VDEDSKR|LI 0.182 . TGME49_248850 275 DSKRLIK|GA 0.159 . TGME49_248850 286 CLMEAVK|QC 0.066 . TGME49_248850 289 EAVKQCR|PG 0.088 . TGME49_248850 295 RPGMMYR|DV 0.336 . TGME49_248850 299 MYRDVGR|IV 0.173 . TGME49_248850 307 VSDVADK|YN 0.064 . TGME49_248850 314 YNLSVVR|SY 0.133 . TGME49_248850 335 PNIPHYR|RN 0.110 . TGME49_248850 336 NIPHYRR|NK 0.120 . TGME49_248850 338 PHYRRNK|AI 0.197 . TGME49_248850 344 KAIGVMK|PG 0.064 . TGME49_248850 359 PMINAGK|SG 0.066 . TGME49_248850 377 ACTIDGR|RS 0.089 . TGME49_248850 378 CTIDGRR|SA 0.174 . TGME49_248850 398 GVEILTK|RL 0.059 . TGME49_248850 399 VEILTKR|LP 0.099 . ____________________________^_________________

  • Fasta :-

    >TGME49_248850 TCGAAACGGAACAAAGGAGAGAGGAAAATCTCTGCTCGCTCGGCGACATTCTCGAAGCCT CTCTCTCACGCCTGCTCCGTTCCCAGAGCTTTCGCGCGGCGCATGCGTCGTGTATGTACA CTGCAAGTCGCCCACGGCTTTGACGCTCGCGGCAACGGGCGAAACACTTGGGAGAGGCCG GAAAAAGCTTCTTTCGGCTTTTCTGAGGGTCTCTTGCTTTCTTCAGAACCGACGTTGTCT TGTTCGTCGCCTCTCGGTTGTCCACGTTGACTTCTTCTCGAGTCCAGCCTCGCGGGAGAT ACACGCTCGATTCTTCTGACTCGGCTGTCTCCTGATCCTGATCCGTTCTTCCGCCCTTTT ATCTTTCTTTATCTTTCCTCTTTTTCCTCTCCAGTCTTCTGACTCTGCCTACCTTTCTTG TTGGCTTCGCAGCCTCCCCTCTCCAATCTTCAGAGGCCTTTCTCTAAGCCTTCCCGCTCG CGGTGGCTGCTTTTTGTCTGCTTTTTGTCTGCTTCCCTTCGCTACTCGCTACTCGGCGTC TTCGCGGTCTCGCCTCTCTTTGCTCCGGCCTCCGGTTTCTGCTCCGTCGTCGGCCTTGCT TCTCGCTTCGCTCTCCTCTCTGCACTCCTCTTCTCTTTGTCTCGGTTTCCCGCCGTTCCT CCTCCCTTCGCTCGCCGGGAAGATGGTGGACACTGCCGCTTCTGCAGACTCCGCGCGGGC GCCAGGCGACCAGGTGCGTTGCGAAGGATGTGCAAGAGAGGTGAAGCCTGAGCTGCTCTG TCCGACCTGCGTCAAACTCGGCATTCAGAGCAGCTACTTCTGCTCGCAAAGCTGCTTCAA GGAGAACTGGAAGAAACACAAAGACGTCCACGCCGTCTTTAAGCTCCTCCAGAAAAAAAA CCAGGAAGCCGAGACCTCCGCAGAAACCGACCTCGCCAAGTTCAATCCGCAGGACCGGAA TACTTGGCGCAACGACCCGCATCTGCGGAACTTTCTTTCTTTTTCCTTCACGGGGGAGTT GAGGCCTTGGCCCATCCTGCAGTGCATGCGTTCGGTGCCTCCCCACATTCAGCAGCCAGA CTACGCACTCTCGGGCGTCCCTCAGTCCGAACTCGACTCTCGACGGAAAAGCAACGTCCA CGTTCACTCTGAGGAGGAAATCCAGCGTCTGCGAGAGACATGCCTCCTGGGCCGCCGAGC CTTGGACTACGCGCACAGCCTCGTGAAGCCCGGCGTCACGACAGAGGAAATAGATGCGAA GGTGCATGCATTCATTGTGGACAATGGAGGATACCCTTCCCCCCTGAACTATCAACAATT TCCGAAGTCCTGCTGCACTTCCGTCAACGAAGTCATTTGTCACGGCATCCCGGACTTCCG ACCTCTTCAAGACGGAGACATTGTGAACATAGACATCACAGTTTTCTTCAAGGGCATGCA CGGAGATTTGAACGAAACGTACTGCGTTGGCGACAATGTCGACGAAGACAGCAAACGCCT CATAAAAGGCGCCTACGAGTGCCTCATGGAGGCTGTTAAGCAGTGCCGGCCCGGCATGAT GTACCGCGACGTGGGCCGCATCGTCTCCGATGTCGCTGACAAGTACAACCTCTCGGTCGT TCGGTCGTACTGCGGCCATGGCATCGGCGAACTCTTCCATACGACGCCAAACATTCCTCA CTATCGAAGAAACAAAGCAATCGGAGTCATGAAGCCTGGCCATGTCTTCACGATCGAGCC GATGATCAACGCGGGCAAGTCTGGAGACCTGCTCTGGCCCGACAACTGGACAGCGTGTAC CATCGACGGACGGCGGTCGGCGCAGTTCGAACACACTCTGCTGGTCACTGAAACAGGCGT CGAGATTCTCACCAAACGCCTCCCCTGCTCTCCCCCGCTCGACTTCGACGCCTCGGCGTA CGACAACTTGTGAACCTCCCCGACGCGTGATCCAACAACCGGTTTCGCGACATGCAGCCC CGAGCGAAAATGACATCCAGGAGAAATCCGCCGTGGAACACCACGGATGGTAGTGGACAT TTACCAGACAAAGGAGAACAACAGAGCGGAGGAGAGCAGAAGAGGACGATGGTAAACAAG GAATATGTTCTATACCATATACATATATATA
  • Download Fasta

  • Fasta :-

    MVDTAASADSARAPGDQVRCEGCAREVKPELLCPTCVKLGIQSSYFCSQSCFKENWKKHK DVHAVFKLLQKKNQEAETSAETDLAKFNPQDRNTWRNDPHLRNFLSFSFTGELRPWPILQ CMRSVPPHIQQPDYALSGVPQSELDSRRKSNVHVHSEEEIQRLRETCLLGRRALDYAHSL VKPGVTTEEIDAKVHAFIVDNGGYPSPLNYQQFPKSCCTSVNEVICHGIPDFRPLQDGDI VNIDITVFFKGMHGDLNETYCVGDNVDEDSKRLIKGAYECLMEAVKQCRPGMMYRDVGRI VSDVADKYNLSVVRSYCGHGIGELFHTTPNIPHYRRNKAIGVMKPGHVFTIEPMINAGKS GDLLWPDNWTACTIDGRRSAQFEHTLLVTETGVEILTKRLPCSPPLDFDASAYDNL

  • title: active site
  • coordinates: H227,D244,D255,H319,E352,E383
No Results
No Results
IDSitePeptideScoreMethod
TGME49_248850156 SVHVHSEEEI0.991unsp

TGME49_048850      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India