TGME49_249590 | proteasome subunit alpha type 5-2, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_249590OTHER0.9996810.0001100.000209
No Results

  • Fasta :-

    >TGME49_249590 MFSTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGIQTKDGVILASERRITSCLLD HRSIQKIVEIDDHIACAMSGLIADARTLIDHARVECANHFFTYNEKMSIHSCIDSVADLA LDFSDVSDGRRKKMMSRPFGVALLVAGVDDQGPSLWCADPSGTVTKYQAVAIGSAQEGAE TMLQEQYSQSMSFEDAEALVLVVLRQVMEEKLNCNNVEVACVKTSDRKYHQYSSEELQAL IDRLPAPTIPTATDLSSA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_249590.fa Sequence name : TGME49_249590 Sequence length : 258 VALUES OF COMPUTED PARAMETERS Coef20 : 3.827 CoefTot : 0.359 ChDiff : -12 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.682 1.229 -0.007 0.488 MesoH : -0.543 0.383 -0.369 0.201 MuHd_075 : 26.581 14.114 5.973 6.050 MuHd_095 : 22.151 12.185 5.897 4.710 MuHd_100 : 16.896 13.422 4.329 4.470 MuHd_105 : 11.946 13.520 3.115 4.358 Hmax_075 : 3.063 1.575 -1.476 2.135 Hmax_095 : 11.800 5.700 0.856 3.450 Hmax_100 : 3.000 3.000 -1.467 2.890 Hmax_105 : -5.775 2.400 -3.727 1.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7764 0.2236 DFMC : 0.7916 0.2084
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 258 TGME49_249590 MFSTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGIQTKDGVILASERRITSCLLDHRSIQKIVEIDDHIACAMSG 80 LIADARTLIDHARVECANHFFTYNEKMSIHSCIDSVADLALDFSDVSDGRRKKMMSRPFGVALLVAGVDDQGPSLWCADP 160 SGTVTKYQAVAIGSAQEGAETMLQEQYSQSMSFEDAEALVLVVLRQVMEEKLNCNNVEVACVKTSDRKYHQYSSEELQAL 240 IDRLPAPTIPTATDLSSA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_249590 5 --MFSTR|SE 0.129 . TGME49_249590 10 TRSEYDR|GV 0.202 . TGME49_249590 20 TFSPEGR|LF 0.104 . TGME49_249590 32 YALGAIK|LG 0.061 . TGME49_249590 43 AVGIQTK|DG 0.061 . TGME49_249590 52 VILASER|RI 0.075 . TGME49_249590 53 ILASERR|IT 0.160 . TGME49_249590 62 SCLLDHR|SI 0.114 . TGME49_249590 66 DHRSIQK|IV 0.077 . TGME49_249590 86 GLIADAR|TL 0.102 . TGME49_249590 93 TLIDHAR|VE 0.100 . TGME49_249590 106 FFTYNEK|MS 0.056 . TGME49_249590 130 SDVSDGR|RK 0.068 . TGME49_249590 131 DVSDGRR|KK 0.134 . TGME49_249590 132 VSDGRRK|KM 0.069 . TGME49_249590 133 SDGRRKK|MM 0.362 . TGME49_249590 137 RKKMMSR|PF 0.116 . TGME49_249590 166 PSGTVTK|YQ 0.081 . TGME49_249590 205 LVLVVLR|QV 0.104 . TGME49_249590 211 RQVMEEK|LN 0.062 . TGME49_249590 223 VEVACVK|TS 0.067 . TGME49_249590 227 CVKTSDR|KY 0.087 . TGME49_249590 228 VKTSDRK|YH 0.070 . TGME49_249590 243 LQALIDR|LP 0.080 . ____________________________^_________________

  • Fasta :-

    >TGME49_249590 AGAGGTGACAGCGGCAAACGGGTGTTTTCTGTTACTGGCAAAGTGGACGCCCGCCTTTCT TCGACGTGAAACTAAAGTGAAACAAAGAGGAGAGAGACAGTCAATCGCCAGCCGAAGGGA AGACGGGGAAGCCTCTGGAAGGAAGTTCCGTGCTGGATGATTCTACACCAGAAAAGCGCC GTTCTGACGACGTTCTACCTTTGAAAGTTGTACTTTCTCTTGTTTTGTCTTTTGTGTCTT TCTGTTTCATCTTCTGCTGCCTGGGGAGACGACGTATAGTTCCTCGTTTTTTCAAGTGTG TGGAGTCCGCCTTCTTTTTCTCGATCTCCTTTCGCTGCTGGCCCCCCTATGTCCGGAAGA CGACCTGTAGCTCTGTCACCCTTTTGTCCGGATTCTCTGTTTGTCCTGGGTTTCAACCGT TCCTCCCCTCTCGCACCTTTGTGTTTCTTTGACACACCTTTGTTTCCCCCCCCTTCTCTC GCTTCGAGACTTCCATCTGTCTTCCAGTCGTAGACCACGCAGCCTCGTCTCGCCTTTTGT CTTCCATCTGCACCGTCGCCAAAATGTTTTCGACCAGGAGCGAATACGATCGAGGTGTGA ACACCTTCTCTCCGGAGGGCCGTCTGTTTCAAGTGGAGTATGCACTAGGTGCAATCAAGC TCGGCAGCACAGCTGTCGGTATCCAGACCAAGGATGGAGTTATTCTTGCCTCAGAAAGGA GAATCACCTCGTGCTTGCTGGATCATCGATCGATTCAAAAGATCGTCGAAATTGATGACC ATATTGCATGCGCCATGAGCGGTCTGATTGCCGATGCCAGGACCCTCATTGACCATGCCC GAGTGGAGTGTGCAAATCACTTCTTCACCTACAACGAGAAAATGTCGATTCACAGCTGCA TCGATTCCGTCGCCGATCTCGCTCTGGATTTCTCCGATGTGAGCGACGGTCGCCGAAAGA AGATGATGAGTCGACCTTTTGGAGTTGCTCTTCTTGTCGCCGGCGTCGACGATCAAGGGC CGTCTCTGTGGTGCGCAGATCCGTCCGGCACTGTCACCAAGTACCAGGCTGTGGCTATTG GTTCCGCCCAGGAAGGCGCTGAGACAATGCTGCAGGAGCAGTACAGTCAGTCGATGAGTT TCGAAGATGCCGAGGCCCTTGTTTTGGTCGTCCTGCGCCAAGTCATGGAGGAAAAACTGA ACTGTAATAACGTTGAGGTGGCGTGCGTGAAGACCAGTGATCGCAAGTACCATCAGTACT CCTCGGAAGAGCTTCAGGCGTTAATCGACCGTCTGCCAGCGCCTACGATCCCTACTGCGA CGGATCTTTCGTCCGCGTGAACGCGACTTCTTCACGAAGTACTATTTTGTTTTCTAGCAC ATTAGGTTGTTCTTTCTGATTTGATACAGTGCGCCATGCAAGCGGGGAAATGGCTAATTC TCTCTGGAATTCCGTGCCATCTTCCCAGAACGGCCTCCCACACAAACACCGGGGGCCCTT GAAGCGAAAAGCCCCGCGAACTCAGACCCGTTGTATGTGTGGCCATCGGGCGTTGTTTTG CTTCTTTGCGTCGCTCGCTTAGAGTCAGAGTGAACGGCTTGCACTTGCCGTTCAGGGCCG TGGCATGTTCCCCACTTTACCTTTCGTCGCGGCGCCCGTGGGTAGCGAGTTTCTCGGGTG CTTTTGCACTGTGTCATCTTTTGTCCGATCTCCTTTTCCTCAACAAACTCTTCTGCTGCG GGCTGCGCACGAACCCTTCGCGTGTTTGCCTTGTATCACCAGATTTAGACACAGAGCGTG TGGAACACTTCGCTGGGAAAGTTCAGAGATGGAACTCGTCCAAAAGAAAAGACACAGAAC TGGCTGGATTTCACGGAAAACACGGCGCCCGATAAATGACCACGTGGC
  • Download Fasta

  • Fasta :-

    MFSTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGIQTKDGVILASERRITSCLLD HRSIQKIVEIDDHIACAMSGLIADARTLIDHARVECANHFFTYNEKMSIHSCIDSVADLA LDFSDVSDGRRKKMMSRPFGVALLVAGVDDQGPSLWCADPSGTVTKYQAVAIGSAQEGAE TMLQEQYSQSMSFEDAEALVLVVLRQVMEEKLNCNNVEVACVKTSDRKYHQYSSEELQAL IDRLPAPTIPTATDLSSA

  • title: active site
  • coordinates: S35,E51,R53,K66,S174
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_249590233 SYHQYSSEEL0.993unspTGME49_249590233 SYHQYSSEEL0.993unspTGME49_249590233 SYHQYSSEEL0.993unspTGME49_249590111 SMSIHSCIDS0.994unspTGME49_249590192 SSQSMSFEDA0.997unsp

TGME49_049590      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India