TGME49_254900 | proteasome subunit beta type 2, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_254900OTHER0.9989060.0005270.000567
No Results

  • Fasta :-

    >TGME49_254900 METVIGIRGRDFALVACDRYANSSILRMKDDEDKLLLVDDDKVMGFAGQIGDRLQFGDYI QKNIHLYRFRNNKKLGCAAAANFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLA SMVSVNKAAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMCKKELMTRFIVSQASFRVKV ATKEGIRTLDI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_254900.fa Sequence name : TGME49_254900 Sequence length : 191 VALUES OF COMPUTED PARAMETERS Coef20 : 4.209 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.759 0.853 -0.182 0.433 MesoH : -0.683 0.092 -0.443 0.198 MuHd_075 : 5.121 4.914 0.999 1.486 MuHd_095 : 23.346 12.658 5.131 3.811 MuHd_100 : 15.644 7.565 2.883 2.935 MuHd_105 : 14.136 3.417 3.922 1.552 Hmax_075 : 2.217 13.767 0.521 4.433 Hmax_095 : 7.175 14.900 1.393 3.946 Hmax_100 : 6.200 14.900 1.189 4.220 Hmax_105 : 4.433 11.433 1.504 4.737 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8898 0.1102 DFMC : 0.8975 0.1025
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 191 TGME49_254900 METVIGIRGRDFALVACDRYANSSILRMKDDEDKLLLVDDDKVMGFAGQIGDRLQFGDYIQKNIHLYRFRNNKKLGCAAA 80 ANFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLASMVSVNKAAHGYAAYFLGGLLDRYYHPELTEEEALKIIEM 160 CKKELMTRFIVSQASFRVKVATKEGIRTLDI 240 ................................................................................ 80 ................................................................................ 160 ............................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_254900 8 ETVIGIR|GR 0.078 . TGME49_254900 10 VIGIRGR|DF 0.099 . TGME49_254900 19 ALVACDR|YA 0.094 . TGME49_254900 27 ANSSILR|MK 0.113 . TGME49_254900 29 SSILRMK|DD 0.095 . TGME49_254900 34 MKDDEDK|LL 0.058 . TGME49_254900 42 LLVDDDK|VM 0.062 . TGME49_254900 53 AGQIGDR|LQ 0.072 . TGME49_254900 62 FGDYIQK|NI 0.056 . TGME49_254900 68 KNIHLYR|FR 0.097 . TGME49_254900 70 IHLYRFR|NN 0.082 . TGME49_254900 73 YRFRNNK|KL 0.169 . TGME49_254900 74 RFRNNKK|LG 0.093 . TGME49_254900 85 AAANFTR|QQ 0.083 . TGME49_254900 93 QLAYYLR|RS 0.077 . TGME49_254900 94 LAYYLRR|SP 0.195 . TGME49_254900 127 SMVSVNK|AA 0.072 . TGME49_254900 143 LGGLLDR|YY 0.109 . TGME49_254900 156 TEEEALK|II 0.070 . TGME49_254900 162 KIIEMCK|KE 0.055 . TGME49_254900 163 IIEMCKK|EL 0.093 . TGME49_254900 168 KKELMTR|FI 0.088 . TGME49_254900 177 VSQASFR|VK 0.082 . TGME49_254900 179 QASFRVK|VA 0.084 . TGME49_254900 183 RVKVATK|EG 0.062 . TGME49_254900 187 ATKEGIR|TL 0.076 . ____________________________^_________________

  • Fasta :-

    >TGME49_254900 ATGGAAACCGTTATCGGCATCCGCGGTCGCGATTTTGCCCTGGTGGCCTGCGATCGGTAT GCAAACTCGAGCATTCTTCGCATGAAGGACGACGAAGACAAACTCTTGCTGGTCGATGAC GACAAAGTGATGGGTTTCGCCGGACAAATCGGTGACCGGCTCCAGTTCGGCGATTACATC CAGAAAAACATCCACCTCTACCGATTCAGAAACAACAAGAAACTCGGTTGCGCTGCCGCA GCGAACTTCACGCGCCAGCAACTCGCGTACTACCTGCGAAGAAGTCCGTACCACGTCGAT GTCATGCTCGCGGGCTACGACGAGATGGGGCCTCACCTTTACTGGATGGATTACCTGGCC TCGATGGTGTCGGTGAATAAGGCGGCGCACGGCTACGCGGCCTATTTTTTGGGGGGGCTT CTAGATCGCTACTACCACCCCGAGTTGACGGAAGAGGAGGCGCTCAAGATCATCGAAATG TGCAAGAAGGAGCTCATGACGCGCTTTATCGTTTCGCAAGCTTCCTTCAGAGTGAAAGTT GCAACCAAGGAAGGGATCCGCACCCTCGATATCTAG
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  • Fasta :-

    METVIGIRGRDFALVACDRYANSSILRMKDDEDKLLLVDDDKVMGFAGQIGDRLQFGDYI QKNIHLYRFRNNKKLGCAAAANFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLA SMVSVNKAAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMCKKELMTRFIVSQASFRVKV ATKEGIRTLDI

    No Results
No Results
No Results
IDSitePeptideScoreMethod
TGME49_25490095 SYLRRSPYHV0.993unsp

TGME49_054900      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India