TGME49_256780 | hypothetical protein

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_256780OTHER0.9999160.0000650.000019
No Results

  • Fasta :-

    >TGME49_256780 MMLADDRSVTVPPLLSYSALDIRTAAVERRRQDQLAASAVQTPGDAAAASTSAESASPTH ACESLQPGVSGPPSSEAANGAGDTQSESPPPNAVFLHVYDLDPTISKYMNKVMRPLGAGA FHAGVEVYGIEYCYGQTYDKTPGITVNRPRRHPAHIYRETIYMGQTTLAHEEFMALIEAL KDEWPGEKYNILTRNCLNFADQLCLLLGVGCLPPWLLRLQQQASSLQESMQYAARKLQQI DETTGLSAVASAAATAAAAAARVFGGFLRPSLESQEGPTVTSRLDRALTSGISLLSGGLG AFADGVAEGLAGLMDDEATPVPYPHPGYESSTVPCSFPDSSLSESPSPFPPPPASAVSPV RSPSASIAASAGVPATVAASAASSGDGLAQSSKKENDKLFYIHDEMNLPASLPLSADENS KLPGQVTGASLYSSMPLASGEVDAGAV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_256780.fa Sequence name : TGME49_256780 Sequence length : 447 VALUES OF COMPUTED PARAMETERS Coef20 : 4.204 CoefTot : 0.263 ChDiff : -19 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.753 1.776 0.301 0.599 MesoH : 0.226 0.538 -0.150 0.266 MuHd_075 : 13.319 9.767 3.923 3.131 MuHd_095 : 6.751 8.859 2.660 0.397 MuHd_100 : 9.333 8.938 2.695 1.131 MuHd_105 : 10.269 8.320 2.257 1.805 Hmax_075 : 10.800 11.083 1.545 3.680 Hmax_095 : 11.400 12.100 1.058 3.220 Hmax_100 : 11.400 12.100 1.058 3.220 Hmax_105 : 3.400 8.225 -0.540 2.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9912 0.0088 DFMC : 0.9754 0.0246
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 447 TGME49_256780 MMLADDRSVTVPPLLSYSALDIRTAAVERRRQDQLAASAVQTPGDAAAASTSAESASPTHACESLQPGVSGPPSSEAANG 80 AGDTQSESPPPNAVFLHVYDLDPTISKYMNKVMRPLGAGAFHAGVEVYGIEYCYGQTYDKTPGITVNRPRRHPAHIYRET 160 IYMGQTTLAHEEFMALIEALKDEWPGEKYNILTRNCLNFADQLCLLLGVGCLPPWLLRLQQQASSLQESMQYAARKLQQI 240 DETTGLSAVASAAATAAAAAARVFGGFLRPSLESQEGPTVTSRLDRALTSGISLLSGGLGAFADGVAEGLAGLMDDEATP 320 VPYPHPGYESSTVPCSFPDSSLSESPSPFPPPPASAVSPVRSPSASIAASAGVPATVAASAASSGDGLAQSSKKENDKLF 400 YIHDEMNLPASLPLSADENSKLPGQVTGASLYSSMPLASGEVDAGAV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_256780 7 MMLADDR|SV 0.111 . TGME49_256780 23 YSALDIR|TA 0.088 . TGME49_256780 29 RTAAVER|RR 0.091 . TGME49_256780 30 TAAVERR|RQ 0.179 . TGME49_256780 31 AAVERRR|QD 0.100 . TGME49_256780 107 LDPTISK|YM 0.062 . TGME49_256780 111 ISKYMNK|VM 0.066 . TGME49_256780 114 YMNKVMR|PL 0.196 . TGME49_256780 140 YGQTYDK|TP 0.059 . TGME49_256780 148 PGITVNR|PR 0.071 . TGME49_256780 150 ITVNRPR|RH 0.082 . TGME49_256780 151 TVNRPRR|HP 0.497 . TGME49_256780 158 HPAHIYR|ET 0.138 . TGME49_256780 181 ALIEALK|DE 0.070 . TGME49_256780 188 DEWPGEK|YN 0.058 . TGME49_256780 194 KYNILTR|NC 0.076 . TGME49_256780 218 LPPWLLR|LQ 0.070 . TGME49_256780 235 SMQYAAR|KL 0.118 . TGME49_256780 236 MQYAARK|LQ 0.095 . TGME49_256780 262 AAAAAAR|VF 0.123 . TGME49_256780 269 VFGGFLR|PS 0.082 . TGME49_256780 283 GPTVTSR|LD 0.082 . TGME49_256780 286 VTSRLDR|AL 0.372 . TGME49_256780 361 SAVSPVR|SP 0.169 . TGME49_256780 393 GLAQSSK|KE 0.069 . TGME49_256780 394 LAQSSKK|EN 0.121 . TGME49_256780 398 SKKENDK|LF 0.066 . TGME49_256780 421 SADENSK|LP 0.069 . ____________________________^_________________

  • Fasta :-

    >TGME49_256780 GCTTGTCTCTGTCAGCGTGCTCTTCTTCAGCACGAACTCGGTTCCCCTGTGTCTTGGCTC CCGCGCTAAGATTCGCTCCTTGATCTCTGAAGGTTCTGTTCGTCTCCACCTCTCTTTCGA GTTTATGCCGTGAGTGTCTCTCCTGCGACGGCTTTTCTTCGCGCCTCCTCGCCGCGGCTC GCGCCTCTCCCTCGGTGCTCTCCAAGATGATGCTCGCAGACGACCGAAGTGTCACCGTCC CTCCTCTTCTCTCTTACTCAGCTTTAGACATTCGAACAGCTGCCGTGGAGAGAAGACGAC AGGATCAGCTCGCGGCGAGTGCTGTGCAGACACCTGGCGACGCCGCCGCCGCTTCCACCT CGGCGGAATCGGCTTCCCCCACACATGCATGCGAGAGCCTCCAGCCTGGAGTCTCAGGCC CTCCGAGCAGTGAAGCGGCGAATGGTGCCGGCGACACACAGTCGGAGAGCCCTCCCCCCA ACGCAGTGTTTCTCCATGTGTATGACCTCGATCCGACAATCAGTAAATACATGAACAAAG TTATGCGGCCTCTCGGCGCAGGCGCTTTTCACGCAGGAGTCGAGGTGTACGGAATTGAGT ACTGTTATGGACAAACCTACGACAAGACACCGGGCATCACCGTCAATCGGCCTCGTCGCC ATCCCGCCCACATCTACAGAGAAACGATTTATATGGGGCAGACGACTCTGGCACACGAAG AGTTCATGGCTCTCATTGAGGCACTGAAAGACGAATGGCCAGGTGAAAAATACAACATTC TGACGAGGAACTGCCTGAACTTTGCAGATCAGCTGTGTCTCCTCCTCGGTGTGGGGTGTC TCCCCCCGTGGCTGCTGCGTCTCCAGCAGCAAGCCTCGAGTCTCCAGGAGAGCATGCAGT ACGCCGCGCGGAAGCTTCAGCAGATCGACGAGACCACTGGCCTCTCGGCGGTTGCGTCGG CGGCCGCCACTGCAGCCGCGGCAGCGGCGCGGGTGTTTGGTGGGTTTCTCCGGCCCTCTT TGGAATCTCAGGAAGGTCCAACGGTCACCTCTCGTCTCGATCGCGCTCTCACCTCGGGAA TCAGCCTGCTGTCGGGTGGTTTAGGCGCTTTCGCAGACGGCGTGGCTGAAGGCCTCGCTG GCTTGATGGACGACGAAGCAACGCCCGTTCCGTATCCGCACCCTGGGTACGAGTCTTCGA CAGTTCCTTGTTCTTTTCCTGACTCTTCTCTCTCAGAGTCTCCCTCTCCCTTTCCGCCGC CTCCCGCATCTGCTGTCTCTCCTGTTCGTTCTCCTTCTGCCTCTATAGCTGCCTCGGCCG GTGTCCCTGCGACAGTCGCTGCGTCTGCAGCTTCCTCGGGGGACGGACTGGCGCAGTCTT CTAAGAAAGAAAATGACAAGTTGTTTTATATCCACGACGAAATGAATCTACCCGCTTCCC TGCCTCTTTCAGCAGACGAAAACAGCAAGCTTCCAGGCCAGGTGACTGGCGCCTCTCTGT ACTCTTCCATGCCGCTGGCGTCTGGAGAGGTTGACGCAGGTGCGGTGTAGGGATGTCAAA GGCCTCGGAAAGAGGAGAATGACGACGCTGCGTAGAGATATGAGACCAAGTAACGGATTT TTTAGAAGCAAAACGCATTTGAAAAAAGTTTTGTTCACGAAAAGATTCGAAGCATTGTTT AGAAAGCGTGTCCTGAA
  • Download Fasta

  • Fasta :-

    MMLADDRSVTVPPLLSYSALDIRTAAVERRRQDQLAASAVQTPGDAAAASTSAESASPTH ACESLQPGVSGPPSSEAANGAGDTQSESPPPNAVFLHVYDLDPTISKYMNKVMRPLGAGA FHAGVEVYGIEYCYGQTYDKTPGITVNRPRRHPAHIYRETIYMGQTTLAHEEFMALIEAL KDEWPGEKYNILTRNCLNFADQLCLLLGVGCLPPWLLRLQQQASSLQESMQYAARKLQQI DETTGLSAVASAAATAAAAAARVFGGFLRPSLESQEGPTVTSRLDRALTSGISLLSGGLG AFADGVAEGLAGLMDDEATPVPYPHPGYESSTVPCSFPDSSLSESPSPFPPPPASAVSPV RSPSASIAASAGVPATVAASAASSGDGLAQSSKKENDKLFYIHDEMNLPASLPLSADENS KLPGQVTGASLYSSMPLASGEVDAGAV

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_256780358 SASAVSPVRS0.994unspTGME49_256780358 SASAVSPVRS0.994unspTGME49_256780358 SASAVSPVRS0.994unspTGME49_256780383 SASAASSGDG0.994unspTGME49_256780392 SLAQSSKKEN0.997unspTGME49_256780271 SFLRPSLESQ0.995unspTGME49_256780274 SPSLESQEGP0.991unsp

TGME49_056780      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India