TGME49_261010 | tat-binding family protein, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_261010OTHER0.9993730.0001190.000507
No Results

  • Fasta :-

    >TGME49_261010 MSALAGPLRPPCATEGEDGPSSGLQTYYEQKIDNLQRVINAKTQDKRRLEAQRNELNAKV RELRDELQVLLEPGSYVGEVVKVMGRNKVLVKVNPEGKYVVDVAKNIDLSQCTVNTRVAL LNDSYRLHKILPTKIDPLVSLMKVEKVPESTYEMVGGLEQQVKEVKEVIELPIKHPELFE SLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFV MAREHAPSIIFMDEIDSIGSQRTEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNR IDILDDALLRPGRIDRKIEFPNPNVDARTEILKIHSRKMNLMRGIDMRKIAQEMNGSSGA EVKAVCTEAGMFALRERRMFVTQEDFEMAVAKVMKKDAEKNMSLRKLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_261010.fa Sequence name : TGME49_261010 Sequence length : 409 VALUES OF COMPUTED PARAMETERS Coef20 : 2.877 CoefTot : -0.095 ChDiff : 1 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.865 -0.133 0.412 MesoH : -0.761 0.181 -0.409 0.167 MuHd_075 : 13.882 6.679 3.254 2.228 MuHd_095 : 14.805 16.184 5.501 3.397 MuHd_100 : 8.099 11.854 3.835 2.278 MuHd_105 : 3.297 5.231 1.955 1.902 Hmax_075 : 0.200 6.700 -0.049 2.090 Hmax_095 : 5.400 9.900 1.173 3.490 Hmax_100 : 5.400 9.900 1.173 3.490 Hmax_105 : 0.600 2.100 -0.208 2.130 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9751 0.0249 DFMC : 0.9658 0.0342
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 409 TGME49_261010 MSALAGPLRPPCATEGEDGPSSGLQTYYEQKIDNLQRVINAKTQDKRRLEAQRNELNAKVRELRDELQVLLEPGSYVGEV 80 VKVMGRNKVLVKVNPEGKYVVDVAKNIDLSQCTVNTRVALLNDSYRLHKILPTKIDPLVSLMKVEKVPESTYEMVGGLEQ 160 QVKEVKEVIELPIKHPELFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFV 240 MAREHAPSIIFMDEIDSIGSQRTEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDALLRPGRIDRKIEF 320 PNPNVDARTEILKIHSRKMNLMRGIDMRKIAQEMNGSSGAEVKAVCTEAGMFALRERRMFVTQEDFEMAVAKVMKKDAEK 400 NMSLRKLWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_261010 9 ALAGPLR|PP 0.091 . TGME49_261010 31 QTYYEQK|ID 0.059 . TGME49_261010 37 KIDNLQR|VI 0.096 . TGME49_261010 42 QRVINAK|TQ 0.070 . TGME49_261010 46 NAKTQDK|RR 0.059 . TGME49_261010 47 AKTQDKR|RL 0.214 . TGME49_261010 48 KTQDKRR|LE 0.109 . TGME49_261010 53 RRLEAQR|NE 0.075 . TGME49_261010 59 RNELNAK|VR 0.058 . TGME49_261010 61 ELNAKVR|EL 0.139 . TGME49_261010 64 AKVRELR|DE 0.288 . TGME49_261010 82 YVGEVVK|VM 0.061 . TGME49_261010 86 VVKVMGR|NK 0.067 . TGME49_261010 88 KVMGRNK|VL 0.062 . TGME49_261010 92 RNKVLVK|VN 0.060 . TGME49_261010 98 KVNPEGK|YV 0.091 . TGME49_261010 105 YVVDVAK|NI 0.075 . TGME49_261010 117 QCTVNTR|VA 0.068 . TGME49_261010 126 LLNDSYR|LH 0.081 . TGME49_261010 129 DSYRLHK|IL 0.126 . TGME49_261010 134 HKILPTK|ID 0.061 . TGME49_261010 143 PLVSLMK|VE 0.057 . TGME49_261010 146 SLMKVEK|VP 0.064 . TGME49_261010 163 GLEQQVK|EV 0.087 . TGME49_261010 166 QQVKEVK|EV 0.069 . TGME49_261010 174 VIELPIK|HP 0.059 . TGME49_261010 188 LGISQPK|GV 0.082 . TGME49_261010 200 GPPGTGK|TL 0.059 . TGME49_261010 205 GKTLLAR|AV 0.134 . TGME49_261010 217 TDCTFIR|VS 0.145 . TGME49_261010 226 GGELVQK|YI 0.094 . TGME49_261010 233 YIGEGSR|MV 0.115 . TGME49_261010 236 EGSRMVR|EL 0.260 . TGME49_261010 243 ELFVMAR|EH 0.090 . TGME49_261010 262 DSIGSQR|TE 0.111 . TGME49_261010 274 GDSEVQR|TM 0.152 . TGME49_261010 293 ESTQNIK|VI 0.055 . TGME49_261010 300 VIMCTNR|ID 0.071 . TGME49_261010 310 LDDALLR|PG 0.069 . TGME49_261010 313 ALLRPGR|ID 0.223 . TGME49_261010 316 RPGRIDR|KI 0.277 . TGME49_261010 317 PGRIDRK|IE 0.073 . TGME49_261010 328 NPNVDAR|TE 0.112 . TGME49_261010 333 ARTEILK|IH 0.066 . TGME49_261010 337 ILKIHSR|KM 0.077 . TGME49_261010 338 LKIHSRK|MN 0.096 . TGME49_261010 343 RKMNLMR|GI 0.124 . TGME49_261010 348 MRGIDMR|KI 0.147 . TGME49_261010 349 RGIDMRK|IA 0.085 . TGME49_261010 363 SSGAEVK|AV 0.113 . TGME49_261010 375 AGMFALR|ER 0.077 . TGME49_261010 377 MFALRER|RM 0.085 . TGME49_261010 378 FALRERR|MF 0.473 . TGME49_261010 392 FEMAVAK|VM 0.062 . TGME49_261010 395 AVAKVMK|KD 0.069 . TGME49_261010 396 VAKVMKK|DA 0.185 . TGME49_261010 400 MKKDAEK|NM 0.059 . TGME49_261010 405 EKNMSLR|KL 0.112 . TGME49_261010 406 KNMSLRK|LW 0.081 . TGME49_261010 409 SLRKLWK|-- 0.075 . ____________________________^_________________

  • Fasta :-

    >TGME49_261010 ATGTCTGCTCTCGCAGGACCTCTCCGGCCGCCATGTGCGACAGAAGGCGAAGACGGCCCG AGCTCCGGACTTCAGACCTACTACGAGCAGAAAATCGATAACTTGCAGAGAGTCATCAAC GCGAAAACACAAGACAAGCGACGTCTTGAGGCTCAGCGGAACGAACTGAACGCGAAAGTG CGAGAACTCCGCGATGAGCTCCAGGTGTTGCTCGAGCCTGGCAGCTATGTGGGCGAGGTT GTCAAGGTGATGGGCCGTAACAAAGTTCTTGTCAAGGTCAATCCGGAGGGCAAGTACGTT GTTGACGTCGCGAAGAACATTGACTTGTCTCAGTGCACAGTCAACACCCGTGTGGCACTG CTGAACGACAGCTACAGGCTCCACAAGATTCTTCCGACGAAAATCGACCCTTTGGTCTCT CTGATGAAAGTGGAGAAAGTACCGGAAAGCACCTACGAGATGGTCGGCGGCTTGGAGCAG CAAGTGAAGGAGGTGAAAGAAGTGATTGAACTGCCTATCAAGCATCCAGAGCTCTTCGAA AGCCTGGGCATCTCCCAGCCGAAGGGCGTTTTGCTGTACGGACCGCCGGGGACGGGGAAG ACGCTGCTCGCTCGAGCGGTCGCTCACCATACAGACTGCACATTCATTCGCGTGAGTGGA GGCGAACTGGTGCAGAAGTACATTGGCGAAGGCAGTCGAATGGTGAGAGAGTTGTTCGTG ATGGCCCGCGAACATGCGCCGAGCATCATCTTCATGGACGAAATCGACAGCATTGGAAGC CAGCGAACTGAGGGCGAACATGGCGACTCCGAGGTCCAACGCACCATGATGGAGCTGCTC AACCAACTCGACGGTTTCGAGTCCACGCAAAACATCAAGGTGATTATGTGCACGAACAGA ATCGACATCCTCGACGACGCGCTCCTTCGCCCTGGACGCATCGACCGCAAAATCGAATTC CCGAACCCAAATGTCGACGCGCGTACGGAGATTCTGAAGATTCACAGTCGGAAGATGAAT TTGATGCGTGGAATCGACATGCGGAAAATTGCCCAGGAAATGAACGGATCGTCGGGAGCC GAAGTCAAGGCTGTCTGCACAGAAGCCGGAATGTTTGCGCTGAGAGAACGGCGTATGTTT GTTACACAAGAAGACTTTGAGATGGCTGTCGCGAAGGTTATGAAGAAGGATGCGGAGAAG AACATGTCACTCCGTAAATTGTGGAAGTAGAGAAGTTTTGGGGGTGGTCGAGGCAGTGTT TTTTCTCTTGAACGGTGGCAGTTGTTTTTCTTCTTTTGTTTTTGAGTTGTGCTTCTTCAA CATTTTTACTGTTCTACTCAACACACCTCTCTGTTGTGGTGTGGGGATGTGTGTTTATGG GCTTCTTGGTGTGTCTCAGATCCCTGTGCGTATCATCCGACAAGGTTTCCACTGGCTGTG AATTCTCGGTCGTGCTCACTCCACACACTGCGTATCTCCGGTAGACTTCGTTCTCTCTCT AACGCTTTGCGATCTTTGCGATTTTC
  • Download Fasta

  • Fasta :-

    MSALAGPLRPPCATEGEDGPSSGLQTYYEQKIDNLQRVINAKTQDKRRLEAQRNELNAKV RELRDELQVLLEPGSYVGEVVKVMGRNKVLVKVNPEGKYVVDVAKNIDLSQCTVNTRVAL LNDSYRLHKILPTKIDPLVSLMKVEKVPESTYEMVGGLEQQVKEVKEVIELPIKHPELFE SLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGGELVQKYIGEGSRMVRELFV MAREHAPSIIFMDEIDSIGSQRTEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNR IDILDDALLRPGRIDRKIEFPNPNVDARTEILKIHSRKMNLMRGIDMRKIAQEMNGSSGA EVKAVCTEAGMFALRERRMFVTQEDFEMAVAKVMKKDAEKNMSLRKLWK

  • title: ATP binding site
  • coordinates: P195,P196,G197,T198,G199,K200,T201,L202,D253,N299
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_261010150 SKVPESTYEM0.995unspTGME49_261010219 SFIRVSGGEL0.996unsp

TGME49_061010      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India