TGME49_262575 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
TGME49_262575OTHER0.9660160.0306280.003356
No Results

  • Fasta :-

    >TGME49_262575 MGDFHEGGGGGNIQAVLLGLLGVALYAGRWWLNSWIAEARRTKERMEPMWLHDKELSVPD VQEHSEARGRSEIVRSVDYSLLIHLVGGSTFVPSAATTAPSASGLNSGRCVYAGEILVEF HLKPSGVSRALANGISLNFSGGVIQGLWVNGKHVGADGAPLHATGVFSFTNAERIQWLRH RLHIPGAWLFAEDANKVFVSFVNCFDQAGVGMQRAADPHDNEEYLFADCRLYEAHRIFPC FDQPNLQGTFSLTVTAPPSCSVVANSGSSTSPFVHAGAQNRSRRFDKPIK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_262575.fa Sequence name : TGME49_262575 Sequence length : 290 VALUES OF COMPUTED PARAMETERS Coef20 : 2.478 CoefTot : -0.250 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.529 1.635 0.247 0.654 MesoH : 0.269 0.584 -0.139 0.325 MuHd_075 : 4.044 6.252 1.821 1.569 MuHd_095 : 15.183 7.835 2.436 2.090 MuHd_100 : 14.650 3.395 1.972 1.202 MuHd_105 : 16.714 4.991 2.642 1.771 Hmax_075 : 8.750 10.600 0.661 4.860 Hmax_095 : 8.500 6.400 -0.093 3.740 Hmax_100 : 14.500 9.100 1.933 5.000 Hmax_105 : 10.600 8.000 0.339 4.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9904 0.0096 DFMC : 0.9901 0.0099
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 290 TGME49_262575 MGDFHEGGGGGNIQAVLLGLLGVALYAGRWWLNSWIAEARRTKERMEPMWLHDKELSVPDVQEHSEARGRSEIVRSVDYS 80 LLIHLVGGSTFVPSAATTAPSASGLNSGRCVYAGEILVEFHLKPSGVSRALANGISLNFSGGVIQGLWVNGKHVGADGAP 160 LHATGVFSFTNAERIQWLRHRLHIPGAWLFAEDANKVFVSFVNCFDQAGVGMQRAADPHDNEEYLFADCRLYEAHRIFPC 240 FDQPNLQGTFSLTVTAPPSCSVVANSGSSTSPFVHAGAQNRSRRFDKPIK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...........................................P...... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_262575 29 VALYAGR|WW 0.071 . TGME49_262575 40 SWIAEAR|RT 0.085 . TGME49_262575 41 WIAEARR|TK 0.176 . TGME49_262575 43 AEARRTK|ER 0.100 . TGME49_262575 45 ARRTKER|ME 0.118 . TGME49_262575 54 PMWLHDK|EL 0.062 . TGME49_262575 68 QEHSEAR|GR 0.135 . TGME49_262575 70 HSEARGR|SE 0.095 . TGME49_262575 75 GRSEIVR|SV 0.437 . TGME49_262575 109 SGLNSGR|CV 0.167 . TGME49_262575 123 LVEFHLK|PS 0.074 . TGME49_262575 129 KPSGVSR|AL 0.155 . TGME49_262575 152 GLWVNGK|HV 0.099 . TGME49_262575 174 SFTNAER|IQ 0.068 . TGME49_262575 179 ERIQWLR|HR 0.086 . TGME49_262575 181 IQWLRHR|LH 0.086 . TGME49_262575 196 FAEDANK|VF 0.054 . TGME49_262575 214 AGVGMQR|AA 0.104 . TGME49_262575 230 YLFADCR|LY 0.085 . TGME49_262575 236 RLYEAHR|IF 0.067 . TGME49_262575 281 HAGAQNR|SR 0.108 . TGME49_262575 283 GAQNRSR|RF 0.101 . TGME49_262575 284 AQNRSRR|FD 0.611 *ProP* TGME49_262575 287 RSRRFDK|PI 0.222 . TGME49_262575 290 RFDKPIK|-- 0.063 . ____________________________^_________________

  • Fasta :-

    >TGME49_262575 ATGGGTGATTTCCATGAAGGCGGCGGAGGCGGGAACATCCAGGCGGTCCTTCTTGGTTTG CTTGGCGTAGCTCTCTACGCCGGCAGATGGTGGCTAAACAGTTGGATTGCAGAAGCGAGG AGGACGAAGGAACGCATGGAGCCTATGTGGTTGCATGACAAAGAACTGAGTGTCCCAGAC GTTCAAGAACACTCAGAGGCTCGTGGACGCAGCGAAATTGTCAGGAGCGTGGACTACTCA CTTCTCATTCATCTCGTAGGCGGGTCAACGTTTGTGCCCTCTGCCGCGACTACGGCGCCT TCAGCTAGCGGTCTGAACAGTGGCCGATGTGTCTATGCTGGCGAAATCCTTGTGGAATTT CATCTGAAACCTTCCGGAGTTTCTCGCGCTCTTGCCAACGGCATCTCCCTCAACTTCTCG GGAGGAGTCATTCAAGGTCTCTGGGTCAACGGCAAACACGTCGGCGCGGACGGTGCACCG CTGCATGCAACTGGCGTTTTCTCCTTCACAAACGCCGAGCGAATTCAGTGGCTCAGACAT CGACTGCACATTCCTGGAGCTTGGTTGTTCGCAGAAGACGCAAACAAAGTCTTTGTCTCG TTTGTCAACTGCTTTGACCAGGCAGGTGTGGGCATGCAAAGGGCAGCAGATCCTCATGAC AACGAAGAGTACCTTTTCGCAGACTGCAGGCTGTATGAGGCCCACAGAATATTTCCGTGC TTTGACCAACCTAACCTTCAGGGAACTTTCAGCCTCACTGTGACCGCACCTCCGTCGTGC TCTGTTGTCGCAAACAGTGGGTCCTCAACTTCACCTTTCGTGCATGCAGGAGCTCAAAAC AGGTCGCGCCGCTTTGACAAGCCAATAAAATAAAAACCAATGCTATGTGCATATATCCAG GGCTGACATGCATATGCATTGTGCGTATGTACATATTTAAATTTGCAAATAGTGTTGTCA TGCCTCCGTAACTGCAAGATCTGAATGCAGCAATTCCACATATCCCACTTGGCACATAAA AACAACCTAGTAGCAAAGCTCATAAAATATCAGACA
  • Download Fasta

  • Fasta :-

    MGDFHEGGGGGNIQAVLLGLLGVALYAGRWWLNSWIAEARRTKERMEPMWLHDKELSVPD VQEHSEARGRSEIVRSVDYSLLIHLVGGSTFVPSAATTAPSASGLNSGRCVYAGEILVEF HLKPSGVSRALANGISLNFSGGVIQGLWVNGKHVGADGAPLHATGVFSFTNAERIQWLRH RLHIPGAWLFAEDANKVFVSFVNCFDQAGVGMQRAADPHDNEEYLFADCRLYEAHRIFPC FDQPNLQGTFSLTVTAPPSCSVVANSGSSTSPFVHAGAQNRSRRFDKPIK

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TGME49_062575      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India