TGME49_262940 | aspartyl proteinase (eimepsin), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_262940SP0.0014290.9979920.000579CS pos: 19-20. AFA-AK. Pr: 0.6769
No Results

  • Fasta :-

    >TGME49_262940 MRLFHTIACLAVCCCPAFAAKARSKHMVRERVAEQEIFAQTGSVEESLFHKPEFNVLLKN RYQETGLKDFISRLLEHHGALATGKHDAAQKAHQELLNFHNSQYFGEIQVGTPPVSFIVV FDTGSSNLWIPASECKQGGCVPHTRFDPKTSSTYLPINAGAGEPAIAFIQYGTGACVLRM AKDTVSIGGIRVQNQTLGLALQESVHPFADLPFDGLVGLGFPDVAGEEGLPPDALPLVDS MMKQKLLKRNAFAVYMSEDLNQPGEITFGSVNPRHTFEGHKPQWFPVISLDYWEVGVHGL RLNRKSLGFCERTRCKAAVDTGSSLITGPSKVINPLLKSLNVAEDCSNKGNLPTVTFILE DTAGRLVKFPLKPSDYLVEEVDSQGRLVTCVAGFIPMDVPAPRGPLFVLGNSFIRKFYTI FDRDHMMVGFMRANHNGSGPSMKESSGSSTSIYWAALLGVMSLCVRATV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_262940.fa Sequence name : TGME49_262940 Sequence length : 469 VALUES OF COMPUTED PARAMETERS Coef20 : 4.851 CoefTot : 0.650 ChDiff : 0 ZoneTo : 29 KR : 5 DE : 0 CleavSite : 31 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.829 1.976 0.551 0.612 MesoH : -0.054 0.473 -0.216 0.304 MuHd_075 : 20.181 16.379 8.720 4.891 MuHd_095 : 20.303 16.906 4.839 6.014 MuHd_100 : 23.719 18.434 6.011 6.551 MuHd_105 : 24.154 17.745 5.909 6.515 Hmax_075 : 4.550 12.862 3.924 2.686 Hmax_095 : 17.938 20.563 5.941 6.169 Hmax_100 : 19.700 22.000 6.327 6.910 Hmax_105 : 19.100 22.400 7.112 6.662 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3156 0.6844 DFMC : 0.4632 0.5368 This protein is probably imported in mitochondria. f(Ser) = 0.0345 f(Arg) = 0.1034 CMi = 0.16051 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 469 TGME49_262940 MRLFHTIACLAVCCCPAFAAKARSKHMVRERVAEQEIFAQTGSVEESLFHKPEFNVLLKNRYQETGLKDFISRLLEHHGA 80 LATGKHDAAQKAHQELLNFHNSQYFGEIQVGTPPVSFIVVFDTGSSNLWIPASECKQGGCVPHTRFDPKTSSTYLPINAG 160 AGEPAIAFIQYGTGACVLRMAKDTVSIGGIRVQNQTLGLALQESVHPFADLPFDGLVGLGFPDVAGEEGLPPDALPLVDS 240 MMKQKLLKRNAFAVYMSEDLNQPGEITFGSVNPRHTFEGHKPQWFPVISLDYWEVGVHGLRLNRKSLGFCERTRCKAAVD 320 TGSSLITGPSKVINPLLKSLNVAEDCSNKGNLPTVTFILEDTAGRLVKFPLKPSDYLVEEVDSQGRLVTCVAGFIPMDVP 400 APRGPLFVLGNSFIRKFYTIFDRDHMMVGFMRANHNGSGPSMKESSGSSTSIYWAALLGVMSLCVRATV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_262940 2 -----MR|LF 0.096 . TGME49_262940 21 CPAFAAK|AR 0.075 . TGME49_262940 23 AFAAKAR|SK 0.245 . TGME49_262940 25 AAKARSK|HM 0.066 . TGME49_262940 29 RSKHMVR|ER 0.094 . TGME49_262940 31 KHMVRER|VA 0.170 . TGME49_262940 51 EESLFHK|PE 0.067 . TGME49_262940 59 EFNVLLK|NR 0.060 . TGME49_262940 61 NVLLKNR|YQ 0.141 . TGME49_262940 68 YQETGLK|DF 0.059 . TGME49_262940 73 LKDFISR|LL 0.095 . TGME49_262940 85 GALATGK|HD 0.068 . TGME49_262940 91 KHDAAQK|AH 0.061 . TGME49_262940 136 IPASECK|QG 0.083 . TGME49_262940 145 GCVPHTR|FD 0.096 . TGME49_262940 149 HTRFDPK|TS 0.092 . TGME49_262940 179 TGACVLR|MA 0.135 . TGME49_262940 182 CVLRMAK|DT 0.130 . TGME49_262940 191 VSIGGIR|VQ 0.073 . TGME49_262940 243 LVDSMMK|QK 0.056 . TGME49_262940 245 DSMMKQK|LL 0.066 . TGME49_262940 248 MKQKLLK|RN 0.066 . TGME49_262940 249 KQKLLKR|NA 0.226 . TGME49_262940 274 FGSVNPR|HT 0.135 . TGME49_262940 281 HTFEGHK|PQ 0.055 . TGME49_262940 301 VGVHGLR|LN 0.074 . TGME49_262940 304 HGLRLNR|KS 0.112 . TGME49_262940 305 GLRLNRK|SL 0.204 . TGME49_262940 312 SLGFCER|TR 0.089 . TGME49_262940 314 GFCERTR|CK 0.090 . TGME49_262940 316 CERTRCK|AA 0.074 . TGME49_262940 331 LITGPSK|VI 0.066 . TGME49_262940 338 VINPLLK|SL 0.105 . TGME49_262940 349 AEDCSNK|GN 0.059 . TGME49_262940 365 LEDTAGR|LV 0.078 . TGME49_262940 368 TAGRLVK|FP 0.120 . TGME49_262940 372 LVKFPLK|PS 0.060 . TGME49_262940 386 EVDSQGR|LV 0.086 . TGME49_262940 403 MDVPAPR|GP 0.096 . TGME49_262940 415 LGNSFIR|KF 0.092 . TGME49_262940 416 GNSFIRK|FY 0.123 . TGME49_262940 423 FYTIFDR|DH 0.104 . TGME49_262940 432 MMVGFMR|AN 0.100 . TGME49_262940 443 GSGPSMK|ES 0.090 . TGME49_262940 466 VMSLCVR|AT 0.085 . ____________________________^_________________

  • Fasta :-

    >TGME49_262940 TATCGTCAGGAGGCGCACACGGATAACACGGACACACAGGTAGTAATCTCGTCGTGTAAC AGTAAGCAACAATGAGGCTGTTTCACACGATTGCATGCTTGGCTGTCTGCTGCTGCCCAG CGTTTGCGGCAAAGGCACGATCGAAACACATGGTTCGCGAACGTGTAGCAGAACAAGAGA TTTTCGCACAAACGGGGTCCGTAGAGGAATCTCTGTTCCACAAACCCGAATTCAATGTGC TGCTGAAAAATCGTTACCAAGAAACCGGTCTTAAGGATTTTATATCTCGTCTTCTCGAGC ATCATGGGGCCCTGGCGACCGGCAAACACGATGCTGCCCAGAAGGCCCACCAGGAGCTAC TCAACTTTCATAACAGTCAATACTTCGGAGAAATCCAAGTTGGGACGCCTCCTGTTTCGT TTATTGTGGTTTTTGATACCGGATCCTCAAACCTCTGGATACCCGCATCTGAGTGCAAAC AAGGTGGTTGTGTGCCGCATACCCGCTTTGATCCAAAAACTTCCTCTACTTACCTACCGA TAAATGCTGGTGCTGGGGAACCAGCCATCGCCTTTATCCAGTACGGGACAGGTGCATGTG TTCTTCGGATGGCGAAAGATACGGTGTCCATTGGAGGGATACGAGTGCAAAATCAAACCC TCGGCTTAGCCCTTCAGGAGTCCGTGCATCCGTTCGCCGATCTGCCGTTCGATGGCCTCG TTGGCCTCGGTTTCCCTGATGTCGCAGGAGAAGAAGGCCTTCCGCCCGACGCTCTTCCCC TCGTGGACTCAATGATGAAGCAAAAACTACTTAAAAGAAATGCGTTCGCCGTATATATGA GTGAAGATTTGAATCAGCCTGGAGAAATAACGTTCGGCTCCGTAAACCCTCGACATACGT TCGAAGGCCACAAACCCCAGTGGTTCCCCGTGATATCTCTGGACTACTGGGAAGTTGGAG TTCATGGCCTACGCCTCAATAGAAAGTCTCTAGGCTTTTGCGAACGCACTCGGTGCAAAG CGGCCGTGGACACGGGTTCAAGCTTGATCACCGGCCCCTCGAAAGTGATTAACCCTCTCC TAAAATCGCTAAACGTGGCTGAAGACTGTTCAAACAAAGGCAATCTCCCAACGGTCACAT TTATTCTTGAGGACACTGCCGGACGTCTCGTTAAGTTCCCACTGAAACCATCTGACTATC TAGTCGAGGAAGTCGACTCTCAAGGAAGATTGGTCACTTGCGTAGCTGGCTTCATACCAA TGGATGTTCCTGCTCCTCGTGGTCCTCTTTTCGTTCTTGGGAATTCGTTTATCAGGAAGT TCTACACAATTTTTGATCGGGATCACATGATGGTTGGATTCATGAGAGCCAACCACAACG GAAGTGGCCCATCAATGAAAGAATCATCCGGGAGCTCAACCAGCATCTATTGGGCAGCAC TGCTCGGCGTTATGAGCTTGTGCGTCAGAGCGACCGTTTGAGACGGTTCCGCATTCCAGA GAACCGAGAAACCGGCTTCAAGTGTTTCTCCCTGAAAACAAAACCGCAGTGGAGTTTTGC TGTCGTGTCGCCGGAGACGACTCTCAGAACAGCTCAGGAACCTAAACGGACAAATGCACC TAAGTTTTGATGGAAACATGAACTGTGTCTTGAACTTACGTATAGGTTAAACCGTTTCCG GTTCC
  • Download Fasta

  • Fasta :-

    MRLFHTIACLAVCCCPAFAAKARSKHMVRERVAEQEIFAQTGSVEESLFHKPEFNVLLKN RYQETGLKDFISRLLEHHGALATGKHDAAQKAHQELLNFHNSQYFGEIQVGTPPVSFIVV FDTGSSNLWIPASECKQGGCVPHTRFDPKTSSTYLPINAGAGEPAIAFIQYGTGACVLRM AKDTVSIGGIRVQNQTLGLALQESVHPFADLPFDGLVGLGFPDVAGEEGLPPDALPLVDS MMKQKLLKRNAFAVYMSEDLNQPGEITFGSVNPRHTFEGHKPQWFPVISLDYWEVGVHGL RLNRKSLGFCERTRCKAAVDTGSSLITGPSKVINPLLKSLNVAEDCSNKGNLPTVTFILE DTAGRLVKFPLKPSDYLVEEVDSQGRLVTCVAGFIPMDVPAPRGPLFVLGNSFIRKFYTI FDRDHMMVGFMRANHNGSGPSMKESSGSSTSIYWAALLGVMSLCVRATV

  • title: inhibitor binding site
  • coordinates: D122,G124,S126,F168,I169,Q170,L216
No Results
No Results
IDSitePeptideScoreMethod
TGME49_262940441 SGSGPSMKES0.994unsp

TGME49_062940      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India