TGME49_263470 | ubiquitin carboxyl-terminal hydrolase UCHL3

_IDPredictionOTHERSPmTPCS_Position
TGME49_263470OTHER0.9999720.0000210.000007
No Results

  • Fasta :-

    >TGME49_263470 MEGKSACKWLPLEADPLLFAQYVNELGGPVAAAVEHGGETEKRHEGHEALLSFEDVLALE SWAAEMVAHPTVAVLLLFPITEATEKGRREQDKQTAGQSLNNVWFTKQTVGNACGTVALL HCLANLPREKFPLQPNRFLEHFLKETADLSPEQRAKVLETDRSLASAHKSFEQQGQSAVP PRESDVDTHFVAFVFHEGHLVELDGRRATPVDHGSVEGGATLEDAARNQRLLKMTLNVIQ KEFVEKCPGELRFQVIAVGDAKAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_263470.fa Sequence name : TGME49_263470 Sequence length : 264 VALUES OF COMPUTED PARAMETERS Coef20 : 3.541 CoefTot : 0.000 ChDiff : -12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.647 0.142 0.632 MesoH : -0.628 0.315 -0.454 0.280 MuHd_075 : 12.843 5.150 4.860 1.844 MuHd_095 : 17.551 14.657 6.730 5.037 MuHd_100 : 17.830 14.510 7.347 4.562 MuHd_105 : 17.058 12.799 6.884 3.545 Hmax_075 : 3.500 6.212 0.097 2.844 Hmax_095 : 5.600 11.900 1.686 3.999 Hmax_100 : 14.600 17.100 4.369 5.310 Hmax_105 : 3.600 10.200 1.304 3.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9620 0.0380 DFMC : 0.9537 0.0463
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 264 TGME49_263470 MEGKSACKWLPLEADPLLFAQYVNELGGPVAAAVEHGGETEKRHEGHEALLSFEDVLALESWAAEMVAHPTVAVLLLFPI 80 TEATEKGRREQDKQTAGQSLNNVWFTKQTVGNACGTVALLHCLANLPREKFPLQPNRFLEHFLKETADLSPEQRAKVLET 160 DRSLASAHKSFEQQGQSAVPPRESDVDTHFVAFVFHEGHLVELDGRRATPVDHGSVEGGATLEDAARNQRLLKMTLNVIQ 240 KEFVEKCPGELRFQVIAVGDAKAA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_263470 4 ---MEGK|SA 0.116 . TGME49_263470 8 EGKSACK|WL 0.057 . TGME49_263470 42 HGGETEK|RH 0.063 . TGME49_263470 43 GGETEKR|HE 0.211 . TGME49_263470 86 ITEATEK|GR 0.063 . TGME49_263470 88 EATEKGR|RE 0.088 . TGME49_263470 89 ATEKGRR|EQ 0.139 . TGME49_263470 93 GRREQDK|QT 0.088 . TGME49_263470 107 NNVWFTK|QT 0.068 . TGME49_263470 128 CLANLPR|EK 0.101 . TGME49_263470 130 ANLPREK|FP 0.057 . TGME49_263470 137 FPLQPNR|FL 0.132 . TGME49_263470 144 FLEHFLK|ET 0.062 . TGME49_263470 154 DLSPEQR|AK 0.087 . TGME49_263470 156 SPEQRAK|VL 0.075 . TGME49_263470 162 KVLETDR|SL 0.101 . TGME49_263470 169 SLASAHK|SF 0.120 . TGME49_263470 182 QSAVPPR|ES 0.132 . TGME49_263470 206 LVELDGR|RA 0.093 . TGME49_263470 207 VELDGRR|AT 0.094 . TGME49_263470 227 TLEDAAR|NQ 0.080 . TGME49_263470 230 DAARNQR|LL 0.188 . TGME49_263470 233 RNQRLLK|MT 0.150 . TGME49_263470 241 TLNVIQK|EF 0.068 . TGME49_263470 246 QKEFVEK|CP 0.076 . TGME49_263470 252 KCPGELR|FQ 0.077 . TGME49_263470 262 IAVGDAK|AA 0.073 . ____________________________^_________________

  • Fasta :-

    >TGME49_263470 ACAACTGAGCCTTGAAACATTCGCCGCCATTGTTTTTGAGGAGACATCACCTTTAGAAGA GAATTCACGTACGTGTGTATGTTTGTTCGTTTCTGCGAATGAAAACAAGTTTGCGTGGTA CTGGTGAGAGACAGAAAAAGTGGATGGTTAAAATGCATTCGGGAGTCTCTGTGTGTCGAG GACAGCGAGCAGGAGTGTTTCAAGTTTTTCACTTCAACCAGGCAATTCCTATGTTCACAT TTTCAAAGGGAACGATACTTTTCTTCCTGGTTTTGCTCTCAAAGCTCCTCGACAGACCTG CGCATCTCTCGCCTACTTCAAACGCTTCTTTTTGCCGTGAAAAAAGCTCGACTTGGTCTT TCGTTCCTCTTTTCTCCAGCGTCTTCCCTCGCATGTTCCGGTTTTAATCCCCTTTCGTCT TTTCGCGGCTCTCGCTTGCGTCTTCCTCCATATTTACGTCAGTGCCCCTCCTCTTTCTTC GCCTCTCGTCTCCAAAGCGTCCTCTCTACAACCTTTTCCCCCTTCCGCTCTCTCCTACAC TATCTGTCGCTCTCTTGTGCTGCTCTTCTCCTCTCCGTTTTTTGTCGGATTCTCTGTCTT CTTCTCTGTCGCGCCTCTGTCTCTCTTCCGTCTCTCTTTCTTCCGTCTCTTCGCTTCTCG CTCGCTGCTGCCTTCCAGCGTGCTCCGGCTTGCCTTTCCTCTCGTGGGCGTGGAGATGGA GGGGAAGAGCGCATGCAAGTGGCTTCCTCTGGAGGCAGATCCGCTGCTCTTTGCGCAGTA CGTCAACGAGCTCGGCGGCCCAGTCGCTGCCGCCGTCGAGCACGGTGGAGAGACAGAGAA GAGACACGAGGGTCACGAGGCACTCCTCTCCTTCGAGGACGTCCTCGCTCTGGAGTCGTG GGCGGCAGAAATGGTGGCGCACCCCACAGTCGCTGTTCTGCTGCTCTTCCCCATCACTGA GGCGACGGAGAAAGGCCGCAGAGAGCAAGACAAACAGACGGCCGGACAGTCGCTGAACAA CGTCTGGTTCACCAAGCAAACTGTCGGTAATGCATGCGGCACTGTGGCCCTGCTCCACTG TCTGGCCAATCTGCCTCGTGAAAAATTTCCTCTGCAGCCTAACCGCTTCCTCGAACACTT CCTCAAGGAGACTGCAGATCTCTCCCCCGAGCAACGAGCAAAGGTTCTCGAGACAGATCG ATCCCTCGCCTCTGCACACAAGAGTTTCGAGCAGCAGGGGCAGTCGGCTGTACCTCCACG CGAGAGCGACGTCGACACGCACTTTGTGGCTTTCGTCTTTCACGAGGGACATTTGGTGGA GTTAGACGGCAGACGCGCCACTCCCGTCGACCACGGCTCGGTCGAAGGTGGAGCGACTCT CGAGGACGCCGCGAGAAACCAGCGTCTTTTGAAAATGACTCTGAACGTCATCCAAAAAGA ATTCGTCGAAAAATGCCCAGGAGAGCTCCGCTTCCAAGTCATCGCCGTCGGCGACGCCAA GGCCGCGTAG
  • Download Fasta

  • Fasta :-

    MEGKSACKWLPLEADPLLFAQYVNELGGPVAAAVEHGGETEKRHEGHEALLSFEDVLALE SWAAEMVAHPTVAVLLLFPITEATEKGRREQDKQTAGQSLNNVWFTKQTVGNACGTVALL HCLANLPREKFPLQPNRFLEHFLKETADLSPEQRAKVLETDRSLASAHKSFEQQGQSAVP PRESDVDTHFVAFVFHEGHLVELDGRRATPVDHGSVEGGATLEDAARNQRLLKMTLNVIQ KEFVEKCPGELRFQVIAVGDAKAA

  • title: catalytic site
  • coordinates: Q108,C114,H189,D204
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_263470184 SPPRESDVDT0.997unspTGME49_263470209 TGRRATPVDH0.992unsp

TGME49_063470      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India