TGME49_265205 | WD domain, G-beta repeat-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >TGME49_265205 MEKGRATSYNRSDDASQTSRSPPASSDPPGAQTTNGGTAVSSGHGKEVEEEANTGPQAVS LVYRHIFGATAEVKNAVHFVEQAVVAYPAGHHVVLYSTETRTQKFFPGSDESLGCTCLAM SPNRRFLAVGERCAQRALVTIHDLLTNKRKKSLAFVDCLSNNFVSLAFSTDTKMLLALGG PPDWCLVYWAWEKPKVVASYKFNNPSQIRYCDCSFNPLDSNVVCMIGDGVSRLMKVQEGS FRPIQNHLLKREGQGYSCHAWLADGNIVAGTEAGELVLFDNGGDFKGSLTCAPGSTRSVL CIVATSRGFICGGEDATLHMYEKTDDDQYKALMELRVERQNPGVRVTSISLSPHEDSLCV CLSNSQLFQMSTKFPRKKGGDESQGLTYLHTPFHKGPILGLDVCELKPLIVTCGEDKSIR VWNFIENTMELCKCYSEEVYSVAFHPSGFHILAGFSDKLRFMNLLLDDLTTMREFVIKGC RECRFSNGGHLFAAVHSNLIQVYETYTCRSVVTLRGHNSKVRSLCWSPDDSILVSTGMDG AVYEFSIIKGLRLSDWVYKGINFSSAVVYRGDEENFNTVFVVGSDNSLKEVSNSQLVNTY DAGSTLSSLALPRTTRALFAGTADAGAPGQLRSYAFPLTGEYLRYPCHGGPVQRICVSKD GSFVISCGMDGTLCICAIVDKEKAVDDEEELTASTVYTDEVLVTRTQVRERKAQMTELER QVEDLTNQMDFQLRNRETQHKEQLLQLEERYNHELELERKKYDILREEKQEQEQEFIDQE RAREDKHAATVQQMETNFQNKMTIEVARYHKVQSERERDNAEWEARLKQVTDEFSAKLAQ MTVEFESSKKASRDELASLREQQELAFKTHQELLRQIEEDADREIEELKEAYEEKLAQEN AEKVRLRGQTGIHRKRHEDLKEQAELLKEELKHKEEASQRYRTDIDKLLTDREMVLKEIQ ERDRTIGDKEQRVYELKKQNQELEKFKFVLGHKIRELKAMIDPKDKTIADMQRQIQAMDA ELVDYHRQNKLSSLELGQLKLKQRALQDEIVDRRQQLATAENQMKRMKNDLYECVQHIQD PKKLKDAITRLYRKYITNELAKDDVDFDILKEQNRQRDYLEKSVESLKRRLAKDSEVHRQ DNIKIMQENASLICEINDLRREVNLLRLERQESRVQGASQNSLNSRKKVEKDSGPELPRK TPLNTHEELAKTVETQRKQIEVLTAQIDTLQHKLNQKGSRFQKPASRLPRRASKTEEAKI PNNSQAVPKKPAGSDRHIAQKPFRQATNTSSSEDAKTGHATPPNTQRLSAKTEKSNERND VAGLASPSLTLDVQGQEEETNEFAPVEMGVAEINRAETGEAGEEMGDKADEAEMQNRREP EELDLKERYGDCRESACTDEEQQPEVSDHVEVQNARPEETEEGDEYSKEERGDELEEIE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_265205.fa Sequence name : TGME49_265205 Sequence length : 1439 VALUES OF COMPUTED PARAMETERS Coef20 : 4.057 CoefTot : 0.000 ChDiff : -41 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.565 1.994 0.532 0.627 MesoH : -0.263 0.360 -0.147 0.225 MuHd_075 : 4.235 7.484 1.724 0.975 MuHd_095 : 27.114 11.362 8.102 2.616 MuHd_100 : 24.056 11.668 7.471 2.439 MuHd_105 : 13.210 8.219 4.792 1.397 Hmax_075 : -15.050 -7.000 -5.873 -1.505 Hmax_095 : -4.500 -3.600 -2.543 -1.300 Hmax_100 : -3.300 -3.400 -2.471 -1.040 Hmax_105 : -10.938 -6.038 -4.177 -1.307 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9979 0.0021 DFMC : 0.9956 0.0044
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1439 TGME49_265205 MEKGRATSYNRSDDASQTSRSPPASSDPPGAQTTNGGTAVSSGHGKEVEEEANTGPQAVSLVYRHIFGATAEVKNAVHFV 80 EQAVVAYPAGHHVVLYSTETRTQKFFPGSDESLGCTCLAMSPNRRFLAVGERCAQRALVTIHDLLTNKRKKSLAFVDCLS 160 NNFVSLAFSTDTKMLLALGGPPDWCLVYWAWEKPKVVASYKFNNPSQIRYCDCSFNPLDSNVVCMIGDGVSRLMKVQEGS 240 FRPIQNHLLKREGQGYSCHAWLADGNIVAGTEAGELVLFDNGGDFKGSLTCAPGSTRSVLCIVATSRGFICGGEDATLHM 320 YEKTDDDQYKALMELRVERQNPGVRVTSISLSPHEDSLCVCLSNSQLFQMSTKFPRKKGGDESQGLTYLHTPFHKGPILG 400 LDVCELKPLIVTCGEDKSIRVWNFIENTMELCKCYSEEVYSVAFHPSGFHILAGFSDKLRFMNLLLDDLTTMREFVIKGC 480 RECRFSNGGHLFAAVHSNLIQVYETYTCRSVVTLRGHNSKVRSLCWSPDDSILVSTGMDGAVYEFSIIKGLRLSDWVYKG 560 INFSSAVVYRGDEENFNTVFVVGSDNSLKEVSNSQLVNTYDAGSTLSSLALPRTTRALFAGTADAGAPGQLRSYAFPLTG 640 EYLRYPCHGGPVQRICVSKDGSFVISCGMDGTLCICAIVDKEKAVDDEEELTASTVYTDEVLVTRTQVRERKAQMTELER 720 QVEDLTNQMDFQLRNRETQHKEQLLQLEERYNHELELERKKYDILREEKQEQEQEFIDQERAREDKHAATVQQMETNFQN 800 KMTIEVARYHKVQSERERDNAEWEARLKQVTDEFSAKLAQMTVEFESSKKASRDELASLREQQELAFKTHQELLRQIEED 880 ADREIEELKEAYEEKLAQENAEKVRLRGQTGIHRKRHEDLKEQAELLKEELKHKEEASQRYRTDIDKLLTDREMVLKEIQ 960 ERDRTIGDKEQRVYELKKQNQELEKFKFVLGHKIRELKAMIDPKDKTIADMQRQIQAMDAELVDYHRQNKLSSLELGQLK 1040 LKQRALQDEIVDRRQQLATAENQMKRMKNDLYECVQHIQDPKKLKDAITRLYRKYITNELAKDDVDFDILKEQNRQRDYL 1120 EKSVESLKRRLAKDSEVHRQDNIKIMQENASLICEINDLRREVNLLRLERQESRVQGASQNSLNSRKKVEKDSGPELPRK 1200 TPLNTHEELAKTVETQRKQIEVLTAQIDTLQHKLNQKGSRFQKPASRLPRRASKTEEAKIPNNSQAVPKKPAGSDRHIAQ 1280 KPFRQATNTSSSEDAKTGHATPPNTQRLSAKTEKSNERNDVAGLASPSLTLDVQGQEEETNEFAPVEMGVAEINRAETGE 1360 AGEEMGDKADEAEMQNRREPEELDLKERYGDCRESACTDEEQQPEVSDHVEVQNARPEETEEGDEYSKEERGDELEEIE 1440 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ................................................................................ 1120 ................................................................................ 1200 ................................................................................ 1280 ................................................................................ 1360 ............................................................................... 1440 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >TGME49_265205 ATGGAAAAAGGCCGAGCAACGAGTTACAACCGGTCGGACGACGCCTCACAGACGTCACGG TCACCTCCGGCGTCCTCAGATCCACCCGGAGCACAAACAACGAACGGTGGTACAGCCGTT TCTTCTGGCCACGGCAAAGAGGTTGAAGAAGAGGCGAACACCGGGCCACAAGCCGTCAGT TTGGTGTATCGTCACATCTTCGGCGCAACTGCAGAGGTCAAGAATGCTGTCCATTTCGTT GAACAAGCGGTAGTTGCCTATCCAGCTGGTCACCACGTTGTCCTTTACTCCACTGAAACG AGAACGCAGAAGTTCTTCCCTGGATCTGACGAATCCTTAGGTTGCACCTGTCTAGCGATG AGCCCGAATAGGCGGTTCTTGGCAGTCGGCGAGAGGTGCGCGCAGAGAGCCTTGGTGACG ATTCACGATTTATTGACAAATAAGAGAAAGAAGTCGTTAGCTTTCGTCGACTGCCTCTCC AACAACTTTGTCAGCCTTGCATTTTCTACCGACACCAAAATGCTATTAGCCCTTGGAGGC CCACCTGACTGGTGTCTTGTATACTGGGCGTGGGAGAAACCGAAAGTCGTCGCCTCCTAC AAGTTTAATAACCCTTCACAAATCCGTTATTGCGACTGCTCTTTCAATCCACTCGACTCA AACGTGGTTTGCATGATTGGCGACGGAGTGAGTCGTTTGATGAAGGTCCAGGAAGGGAGT TTCCGCCCAATACAGAACCACCTACTGAAGCGAGAAGGGCAAGGCTATTCATGCCATGCT TGGCTGGCCGACGGAAACATCGTAGCCGGCACGGAAGCAGGTGAACTGGTTCTTTTCGAC AATGGAGGAGACTTCAAAGGCTCCCTGACGTGTGCACCGGGCTCCACGCGTTCAGTTCTC TGTATCGTTGCAACCAGCAGGGGATTCATTTGCGGGGGCGAAGATGCCACGCTGCACATG TATGAAAAGACCGACGATGACCAGTACAAAGCATTGATGGAACTGAGAGTCGAACGCCAG AACCCAGGTGTTCGAGTGACGAGTATCTCTCTCTCGCCGCATGAAGACTCACTTTGTGTA TGCCTCTCAAATTCCCAACTGTTCCAAATGTCCACCAAGTTCCCGAGAAAAAAGGGCGGC GATGAGAGCCAAGGGCTCACATACCTTCACACGCCGTTCCACAAGGGTCCCATTCTCGGA TTGGATGTCTGTGAGCTAAAGCCGCTGATTGTCACGTGCGGAGAAGACAAATCGATCCGA GTGTGGAATTTTATCGAAAACACGATGGAGCTCTGCAAGTGCTACTCCGAAGAGGTGTAC AGCGTCGCATTTCACCCATCTGGCTTCCACATTCTCGCAGGGTTTTCTGATAAACTCCGG TTCATGAACTTATTGCTCGACGACCTAACCACTATGAGAGAGTTCGTCATCAAAGGCTGC CGTGAATGCCGCTTCTCAAATGGAGGCCACCTCTTTGCCGCCGTTCATTCCAACTTGATT CAAGTCTACGAGACGTATACGTGCCGCTCTGTAGTTACGTTGCGAGGTCATAACTCGAAA GTGCGGTCACTCTGTTGGTCGCCTGACGACTCCATTCTCGTCTCCACAGGCATGGACGGA GCTGTCTACGAGTTTTCGATCATAAAGGGCCTCCGCCTCTCTGACTGGGTATACAAAGGC ATAAACTTCAGTAGCGCCGTCGTGTATCGTGGTGACGAGGAGAACTTCAATACTGTATTT GTTGTAGGATCGGACAACTCTTTGAAGGAGGTTTCGAATTCTCAGTTGGTGAACACGTAC GATGCCGGGAGCACCTTGTCTTCTCTCGCGTTGCCAAGAACGACCCGAGCGCTGTTCGCT GGAACAGCAGACGCTGGAGCACCTGGACAGCTCCGAAGTTATGCCTTTCCACTTACAGGA GAATATCTTCGATATCCATGCCATGGTGGACCTGTTCAGCGAATTTGTGTTTCCAAGGAC GGAAGCTTTGTGATTTCGTGCGGAATGGACGGCACACTTTGCATTTGCGCAATTGTGGAC AAAGAGAAGGCAGTCGACGACGAAGAAGAATTGACCGCGAGCACGGTCTACACAGACGAA GTTCTTGTGACGCGCACTCAAGTACGTGAACGCAAAGCCCAAATGACTGAGCTCGAGCGC CAAGTTGAGGATCTGACGAATCAAATGGACTTCCAACTCCGTAATCGAGAAACGCAACAC AAAGAGCAACTGCTGCAACTCGAGGAACGCTACAACCACGAACTCGAGCTGGAAAGGAAG AAGTACGACATACTCCGTGAAGAGAAGCAAGAGCAAGAGCAGGAGTTCATTGACCAGGAG CGCGCCCGTGAAGACAAGCACGCAGCGACCGTTCAGCAGATGGAGACGAATTTCCAAAAT AAAATGACAATCGAAGTCGCAAGGTACCACAAAGTGCAAAGCGAGCGAGAACGCGATAAT GCCGAGTGGGAAGCGCGCCTCAAACAAGTCACAGACGAGTTCTCCGCCAAGCTTGCCCAG ATGACGGTGGAGTTCGAGTCCTCCAAGAAAGCCTCACGTGACGAACTCGCGAGTCTCCGC GAACAGCAGGAACTGGCCTTCAAAACTCATCAAGAGCTGCTGAGGCAAATTGAGGAAGAT GCCGACAGAGAAATTGAGGAGCTGAAAGAGGCGTACGAAGAGAAACTCGCCCAGGAAAAC GCAGAAAAAGTTCGTCTGCGTGGACAGACGGGCATCCACCGAAAACGCCACGAAGATCTG AAGGAGCAAGCGGAGCTTCTCAAGGAAGAATTGAAACATAAAGAGGAAGCGTCGCAGAGA TACCGAACCGATATCGACAAGCTGTTGACAGACCGGGAGATGGTGCTGAAGGAGATTCAG GAGCGCGACCGGACGATAGGCGACAAGGAGCAGCGCGTGTACGAGTTGAAAAAGCAGAAT CAGGAACTGGAGAAGTTTAAGTTTGTGTTGGGCCACAAGATTCGCGAGTTGAAGGCGATG ATCGATCCAAAGGACAAAACGATTGCGGACATGCAGCGGCAGATCCAGGCGATGGACGCA GAGCTCGTGGACTACCACCGCCAGAACAAGTTATCGAGTCTGGAGTTAGGCCAGCTGAAG TTGAAACAACGTGCACTGCAGGACGAAATCGTGGACCGACGGCAGCAGCTTGCTACAGCG GAGAACCAGATGAAACGCATGAAGAACGACTTGTACGAGTGCGTGCAACACATTCAGGAC CCGAAGAAACTGAAGGACGCGATCACGCGTCTGTACCGAAAGTACATCACCAACGAACTC GCGAAGGACGACGTGGATTTTGACATTCTGAAGGAGCAGAACCGACAGCGGGACTATTTG GAGAAGTCGGTCGAGTCTCTCAAGCGCCGTCTCGCCAAGGACTCGGAAGTTCACCGCCAA GACAACATCAAAATTATGCAAGAGAACGCGTCATTGATTTGTGAAATAAACGACCTCCGG AGGGAAGTCAACCTGCTCCGCTTGGAGCGACAAGAATCCCGGGTCCAAGGTGCCTCCCAA AACAGTTTGAATTCCCGAAAGAAGGTGGAGAAAGACAGCGGTCCCGAGTTGCCACGCAAA ACCCCCCTGAATACCCATGAGGAACTCGCGAAAACCGTCGAAACGCAGAGAAAGCAAATC GAGGTCTTGACCGCGCAAATCGACACCCTCCAACACAAGTTAAATCAGAAAGGCAGCCGG TTCCAAAAACCGGCGAGTCGCCTACCACGGCGTGCCTCGAAGACCGAAGAAGCCAAAATC CCGAACAACTCTCAGGCGGTCCCCAAAAAGCCAGCAGGGAGCGACAGACACATTGCACAA AAGCCCTTCAGACAGGCGACAAATACTTCCAGCTCTGAAGACGCAAAGACGGGGCATGCA ACTCCTCCTAATACACAGAGGCTCTCAGCGAAAACTGAGAAGTCGAACGAGAGAAACGAC GTGGCGGGCTTGGCATCTCCTAGCCTTACCCTTGACGTGCAGGGACAGGAAGAAGAGACA AACGAATTCGCACCGGTCGAGATGGGAGTTGCAGAAATCAATCGAGCAGAAACTGGGGAA GCGGGAGAAGAGATGGGAGACAAAGCAGACGAGGCAGAAATGCAGAACCGGAGAGAACCG GAAGAACTCGACCTGAAGGAAAGATACGGAGACTGCCGAGAGTCGGCGTGCACGGATGAG GAGCAGCAGCCGGAGGTGTCTGACCATGTCGAAGTCCAAAACGCCAGACCAGAGGAGACG GAAGAAGGGGACGAGTACTCGAAAGAGGAACGTGGTGACGAACTGGAAGAGATAGAGTGA
  • Download Fasta

  • Fasta :-

  • title: structural tetrad
  • coordinates: V129,R136,H142,D143,L178,P182,W189,A190,N203,N204,V223,D228,M234,K235,H247,A269,F279,D280,G294,S295,C311,D315,Y321,E322,V337,E338,C359,N364,P375,R376,Y388,H394,T412,D416,W422,N423
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_265205527 SSLCWSPDDS0.993unspTGME49_265205527 SSLCWSPDDS0.993unspTGME49_265205527 SSLCWSPDDS0.993unspTGME49_265205814 SHKVQSERER0.992unspTGME49_265205852 SSKKASRDEL0.994unspTGME49_265205858 SDELASLREQ0.993unspTGME49_2652051193 SVEKDSGPEL0.993unspTGME49_2652051253 SPRRASKTEE0.997unspTGME49_2652051291 STNTSSSEDA0.996unspTGME49_2652051309 STQRLSAKTE0.992unspTGME49_2652051315 SKTEKSNERN0.994unspTGME49_2652058 SGRATSYNRS0.996unspTGME49_265205352 SSISLSPHED0.997unsp

TGME49_065200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India