TGME49_267080 | 26S protease regulatory subunit 4, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_267080OTHER0.9999660.0000010.000033
No Results

  • Fasta :-

    >TGME49_267080 MGNAQPRGGGFPGGSEDDKKKERKRLEAAPPTHIGKRKKKGKGPVGHSRLPTVTPITKCR LRLLRLERIKDYLLLEEEYILNQEQRKPAEEKNEEDVNRVDELRGSPLSVGNLEEIIDEQ HAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILNDEVDPLISVMKVEKA PLETYADIGGLEKQIQEVKEAVEFPLTHPEFFDDIGISPPKGVILYGPPGTGKTLLAKAV ANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAHEHAPSIVFIDEIDAVGTKRYDATS GGEKEIQRTMLELLNQLDGFESKGDVKVIMATNRIESLDPALIRPGRIDRKIQLPNPDAK TKRKIFQIHTAKMTMADDVDLEEFVMAKDELSGADIKATCTEAGLLALRERRMKITQEDL RKAKEKALYQKKGNIPESLYL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_267080.fa Sequence name : TGME49_267080 Sequence length : 441 VALUES OF COMPUTED PARAMETERS Coef20 : 2.113 CoefTot : -1.907 ChDiff : -5 ZoneTo : 15 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.600 1.059 -0.014 0.446 MesoH : -0.664 0.338 -0.404 0.236 MuHd_075 : 27.447 10.515 6.326 3.718 MuHd_095 : 13.202 7.030 2.183 2.393 MuHd_100 : 18.223 8.907 3.203 2.667 MuHd_105 : 17.032 8.673 3.019 2.478 Hmax_075 : 5.133 -1.867 -1.384 1.913 Hmax_095 : 1.900 0.200 -2.022 2.140 Hmax_100 : 6.000 0.200 -1.394 2.030 Hmax_105 : 2.700 -2.300 -1.768 1.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9857 0.0143 DFMC : 0.9741 0.0259
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 441 TGME49_267080 MGNAQPRGGGFPGGSEDDKKKERKRLEAAPPTHIGKRKKKGKGPVGHSRLPTVTPITKCRLRLLRLERIKDYLLLEEEYI 80 LNQEQRKPAEEKNEEDVNRVDELRGSPLSVGNLEEIIDEQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSI 160 VGILNDEVDPLISVMKVEKAPLETYADIGGLEKQIQEVKEAVEFPLTHPEFFDDIGISPPKGVILYGPPGTGKTLLAKAV 240 ANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAHEHAPSIVFIDEIDAVGTKRYDATSGGEKEIQRTMLELLNQLDGF 320 ESKGDVKVIMATNRIESLDPALIRPGRIDRKIQLPNPDAKTKRKIFQIHTAKMTMADDVDLEEFVMAKDELSGADIKATC 400 TEAGLLALRERRMKITQEDLRKAKEKALYQKKGNIPESLYL 480 .......................................P........................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...........P............................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ TGME49_267080 7 MGNAQPR|GG 0.129 . TGME49_267080 19 GGSEDDK|KK 0.071 . TGME49_267080 20 GSEDDKK|KE 0.100 . TGME49_267080 21 SEDDKKK|ER 0.103 . TGME49_267080 23 DDKKKER|KR 0.075 . TGME49_267080 24 DKKKERK|RL 0.132 . TGME49_267080 25 KKKERKR|LE 0.151 . TGME49_267080 36 PPTHIGK|RK 0.062 . TGME49_267080 37 PTHIGKR|KK 0.196 . TGME49_267080 38 THIGKRK|KK 0.165 . TGME49_267080 39 HIGKRKK|KG 0.102 . TGME49_267080 40 IGKRKKK|GK 0.665 *ProP* TGME49_267080 42 KRKKKGK|GP 0.079 . TGME49_267080 49 GPVGHSR|LP 0.091 . TGME49_267080 58 TVTPITK|CR 0.055 . TGME49_267080 60 TPITKCR|LR 0.081 . TGME49_267080 62 ITKCRLR|LL 0.073 . TGME49_267080 65 CRLRLLR|LE 0.148 . TGME49_267080 68 RLLRLER|IK 0.184 . TGME49_267080 70 LRLERIK|DY 0.066 . TGME49_267080 86 ILNQEQR|KP 0.096 . TGME49_267080 87 LNQEQRK|PA 0.113 . TGME49_267080 92 RKPAEEK|NE 0.071 . TGME49_267080 99 NEEDVNR|VD 0.084 . TGME49_267080 104 NRVDELR|GS 0.084 . TGME49_267080 142 ILSFVDK|DL 0.094 . TGME49_267080 156 SVLLHNK|TS 0.061 . TGME49_267080 176 PLISVMK|VE 0.061 . TGME49_267080 179 SVMKVEK|AP 0.058 . TGME49_267080 193 DIGGLEK|QI 0.063 . TGME49_267080 199 KQIQEVK|EA 0.061 . TGME49_267080 221 IGISPPK|GV 0.079 . TGME49_267080 233 GPPGTGK|TL 0.061 . TGME49_267080 238 GKTLLAK|AV 0.077 . TGME49_267080 250 TSATFLR|VV 0.199 . TGME49_267080 259 GSELIQK|YL 0.086 . TGME49_267080 266 YLGDGPK|LV 0.073 . TGME49_267080 269 DGPKLVR|EM 0.074 . TGME49_267080 273 LVREMFK|LA 0.080 . TGME49_267080 294 IDAVGTK|RY 0.061 . TGME49_267080 295 DAVGTKR|YD 0.177 . TGME49_267080 304 ATSGGEK|EI 0.062 . TGME49_267080 308 GEKEIQR|TM 0.080 . TGME49_267080 323 LDGFESK|GD 0.071 . TGME49_267080 327 ESKGDVK|VI 0.061 . TGME49_267080 334 VIMATNR|IE 0.076 . TGME49_267080 344 LDPALIR|PG 0.079 . TGME49_267080 347 ALIRPGR|ID 0.232 . TGME49_267080 350 RPGRIDR|KI 0.192 . TGME49_267080 351 PGRIDRK|IQ 0.074 . TGME49_267080 360 LPNPDAK|TK 0.083 . TGME49_267080 362 NPDAKTK|RK 0.073 . TGME49_267080 363 PDAKTKR|KI 0.325 . TGME49_267080 364 DAKTKRK|IF 0.089 . TGME49_267080 372 FQIHTAK|MT 0.070 . TGME49_267080 388 EEFVMAK|DE 0.065 . TGME49_267080 397 LSGADIK|AT 0.069 . TGME49_267080 409 AGLLALR|ER 0.069 . TGME49_267080 411 LLALRER|RM 0.080 . TGME49_267080 412 LALRERR|MK 0.508 *ProP* TGME49_267080 414 LRERRMK|IT 0.138 . TGME49_267080 421 ITQEDLR|KA 0.078 . TGME49_267080 422 TQEDLRK|AK 0.112 . TGME49_267080 424 EDLRKAK|EK 0.110 . TGME49_267080 426 LRKAKEK|AL 0.102 . TGME49_267080 431 EKALYQK|KG 0.062 . TGME49_267080 432 KALYQKK|GN 0.097 . ____________________________^_________________

  • Fasta :-

    >TGME49_267080 AGAGAACCTTTTTCCTCCTTTTCCCCCGTTTCCTCCGTTCTTCTTCGTTTTAAACTGCAG GAAGTTTCTCCTCGCCTTCGACCGCGTCCGGGGACTGAGGTCTGCTGTCCACGCAAGACT TCCTCTTCTCCTTTTTCGCGCCGCCAGACGAGGTCTTCCCGACTTTTCGTCTGCACGCTT CTCCGCATCGCCGCATCTCCGCATCTCCCCATCTCCGTCTTCTTCCGTTTTTGACCGTCT CCGCTCTTTCTCAGACCTCGCTCGAACGCCGCGATTCTCGCCTCTTATTTTCCCGCCTCG TCTCCGGCCGTTCCACGCACCTTCCTCGGCCGTTGCCTCGCGTTCCTCGGGTGTACAGAC ACCTGAGCGCTCTGCGTTGTCGCAGCATTTCTCTGAGCCGCAACATGGGGAATGCGCAGC CTCGCGGCGGAGGCTTCCCAGGAGGCTCTGAAGATGACAAGAAGAAGGAGAGAAAGAGAC TTGAAGCTGCGCCTCCAACGCACATTGGAAAAAGAAAGAAGAAAGGGAAAGGCCCCGTCG GTCACAGCAGACTTCCTACTGTGACTCCCATCACCAAGTGTCGCCTGCGTCTGCTCCGAC TCGAGCGCATAAAAGACTACCTTCTTCTGGAGGAAGAGTATATTCTCAACCAGGAGCAGC GGAAGCCGGCGGAGGAGAAGAACGAAGAAGATGTGAATCGCGTGGACGAGCTCCGTGGAT CACCACTAAGCGTAGGGAATCTCGAGGAAATCATCGATGAACAGCATGCAATCGTTTCTT CCTCCATCGGTCCCGAGTACTACGTCAACATCCTCTCTTTCGTCGACAAAGACCTGCTCG AGCCTGGATGCAGTGTCCTTCTTCACAACAAAACGAGCAGCATTGTCGGAATTTTGAACG ACGAGGTGGACCCTCTCATCTCGGTCATGAAAGTGGAGAAGGCACCGCTTGAGACGTATG CAGACATCGGCGGACTGGAGAAGCAGATTCAGGAGGTGAAGGAGGCCGTGGAATTTCCTC TCACGCATCCGGAGTTCTTCGACGACATCGGTATCAGCCCTCCGAAGGGTGTCATCCTCT ACGGACCCCCCGGGACAGGAAAGACTCTGCTCGCGAAGGCCGTGGCGAACGAGACGTCGG CTACGTTCCTTCGCGTCGTCGGAAGTGAACTCATTCAAAAGTATTTGGGAGACGGCCCGA AGCTGGTCCGGGAAATGTTTAAACTCGCTCACGAGCACGCGCCGAGCATCGTCTTCATCG ACGAAATCGATGCGGTTGGAACGAAAAGATACGACGCCACGAGCGGAGGCGAGAAGGAAA TCCAGCGAACGATGCTCGAGCTGCTGAACCAGCTCGACGGATTCGAGAGCAAAGGCGACG TCAAAGTGATCATGGCGACGAACCGCATCGAGAGTCTAGACCCTGCGCTCATTCGGCCTG GACGCATTGATCGGAAAATTCAACTCCCCAATCCGGACGCGAAAACCAAGCGAAAAATCT TCCAGATCCACACAGCGAAAATGACCATGGCCGACGACGTCGACCTCGAGGAATTTGTTA TGGCGAAAGACGAACTGTCGGGTGCAGATATCAAGGCGACATGCACGGAGGCGGGGTTGC TGGCCTTGCGAGAGCGACGCATGAAAATCACCCAGGAAGATCTGCGGAAGGCGAAGGAGA AGGCGCTGTATCAGAAGAAAGGGAACATTCCAGAGAGTCTGTATTTGTGAAGAGGCGGGA GAAAACAATGGTGTCTCCCCAGAGCGTCGAGACAGCTCGAAGAACGAAGCTGCCTCTTCA GCACCCTCCAGATCTGAGCCAGGAGCCCAACTCGATTTGTGGCCTCCCAAGAAGGACTGA CATCTCGAGGCGAAGAAGAGACTGGAAAATGTCATGGCAGGCTTCAGAGGCACCTTCTGC TGAGAAGAAAGGCTGTGCGAGCGCTTTCGACCCGTCAGTTTTGAGGCGCCGCCGGTAGCG GACACCCTGTGGCTTCGGTTTCTCTGTGATAGAACTGTCGAAACGCTGCGAAGATAGAAA TGACGAGGTCGCACTGCAAGAAGACAAGAGAGATTCTAAAGAAAAGGTTATTTGCCCGAA AACTTAGCGTCTGCGTGTCTGATTTTTTCGAGTTGAGTTGCCAGTGTGGACACGCATGAT CGCGGAGTGGGGGCACTCAAAGCGAAACCGTTTATCGCCAACAGAGTGAACCGTTCAGAC CTTTTTTCTTGGCGCATGCAAGGAAAAAGACGTGAACTGCGTAGTCGCACTCGGCGATTC CCGCGGGTGAGGGAGTGGGAGTAGCGAATTCAGTCGAAAGCGAAGAGGCTTTCCAGAGCG CAGACGCGACAGATTTGCCGAAGGAAAAAAGTCACGAACGTGTCTGTTTGAGAGAAGAAC CCGGGCCGGCACAGGTTCTCCGTGTATTTTTTAGGAAGGATCGTGTTGACAGCGACAAGA AAACCACACAAATGCTTGGGTCCACGGGAGCGCTGTCCCCCAGACACACGCAGAAATACG AGTGAAACTTACACTGCTTCCTGCGACAACTTTCGCAATTACGAGTGGAACGCTTCTCAG AAATCTTGCCCAAACCAGAGAGCTGCTCTGGTATGGTTCTTTGCTTGCTCAAGCATCTGA CTGTCTCTCGCTGTTCATACGCGTCTTTGTTTACCGGTTAAAAGTCGGCTGTGCAGAGCT TCCTTGTCTGCATCTCACAGCTAAATTACATTCAGTATCCTAGAACTAAATGGGGTGACT CGACGCCGCAACGGGGCAGCCAGGATCGCGAAGAATGTGTGACATATGGAACGAGAAACA CAGCACCTGAGAGGAACTGCTTAAGTTCAGCTGCTGAGGATTTCAAACGGCGGACCGCAC CCTCTGCACCGCAAGGCGTCATCTTCTTGCCTAGTCCTCTAGAGCGTGTCCTGCGTTGCT TTCTGGCACAACGTGAAAACGTGAGAAATCCTGGGGGAGAACGTGTGTGAAGGCTTGTAC GCAGGAAACAATTCCTAAGAGCATGTCGTGTCGACTGTTCGGCGCATGAGCTGTCGAAGA AGGCTCCCGAATACCTGACCTCAGCACTCTG
  • Download Fasta

  • Fasta :-

    MGNAQPRGGGFPGGSEDDKKKERKRLEAAPPTHIGKRKKKGKGPVGHSRLPTVTPITKCR LRLLRLERIKDYLLLEEEYILNQEQRKPAEEKNEEDVNRVDELRGSPLSVGNLEEIIDEQ HAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILNDEVDPLISVMKVEKA PLETYADIGGLEKQIQEVKEAVEFPLTHPEFFDDIGISPPKGVILYGPPGTGKTLLAKAV ANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAHEHAPSIVFIDEIDAVGTKRYDATS GGEKEIQRTMLELLNQLDGFESKGDVKVIMATNRIESLDPALIRPGRIDRKIQLPNPDAK TKRKIFQIHTAKMTMADDVDLEEFVMAKDELSGADIKATCTEAGLLALRERRMKITQEDL RKAKEKALYQKKGNIPESLYL

  • title: ATP binding site
  • coordinates: P228,P229,G230,T231,G232,K233,T234,L235,D286,N333
No Results
No Results
IDSitePeptideScoreMethod
TGME49_267080300 SYDATSGGEK0.997unsp

TGME49_067080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India