TGME49_267490 | preprocathepsin c precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_267490SP0.0111090.9882530.000638CS pos: 19-20. ARA-DL. Pr: 0.9086
No Results

  • Fasta :-

    >TGME49_267490 MKLVGIGIVTVGGLGVARADLPIHGLMNDVLGTWKFTIGADGSDHPTSCGSGAPNFNLEN LRPALSNYASWLASQSPVETEVELSLTDKLIRKNSDMAPRNNWKYLAVTLPSKPDVPVGT WTMVYDEGFEVRLPNRRFFGFLKYSRKNGKECPRRLNGDNEDSFGETRCYVTDPSKIHMG WTVEESKDQHQLKHTWGCFYGEKTRKEEREESIPAVVLENTAYQLPTMPSLSSLTDGISP PKTWTPTVHRQFANASPRDLSLYKGQLGFRKYHPLVEYALPTFLQKDRTGSKQQRTICNA AETVLERRSKPPKQWTWGDPFLSKSWKPETDPVVNQGACGSCYAVSSAYILQKRFEIMFS KLFPGENTTVFESPLSAQSILSCSPYNQGCDGGYPFLVGKHAKEFGFGTEQCQRYSASHD PQVASCQMNIGSVNRTPEHSAPGCGPDDRWYAKDYNYVGGFYEGCNEEKMMNEMYHHGPV VVAIDAPDTLFMYQSGLFDSQPSEHGKICDIPKKGFNGWEYTNHAVAVVGWGEDEPDNAT GKPKKFWVVRNTWGSNWGTHGYVKIPRGENMAAIESQAVYFDPDLTRGRAAQLIKQYRKQ REA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_267490.fa Sequence name : TGME49_267490 Sequence length : 603 VALUES OF COMPUTED PARAMETERS Coef20 : 3.742 CoefTot : -0.702 ChDiff : 0 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.447 1.794 0.269 0.677 MesoH : -0.204 0.240 -0.261 0.258 MuHd_075 : 11.979 3.664 2.466 1.544 MuHd_095 : 18.931 9.824 5.247 4.384 MuHd_100 : 5.682 2.181 1.470 1.527 MuHd_105 : 12.940 6.560 2.932 2.328 Hmax_075 : 14.583 15.600 3.092 4.912 Hmax_095 : 16.300 18.100 3.721 6.300 Hmax_100 : 14.700 13.600 3.160 5.680 Hmax_105 : 14.900 17.400 3.380 5.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9358 0.0642 DFMC : 0.9592 0.0408
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 603 TGME49_267490 MKLVGIGIVTVGGLGVARADLPIHGLMNDVLGTWKFTIGADGSDHPTSCGSGAPNFNLENLRPALSNYASWLASQSPVET 80 EVELSLTDKLIRKNSDMAPRNNWKYLAVTLPSKPDVPVGTWTMVYDEGFEVRLPNRRFFGFLKYSRKNGKECPRRLNGDN 160 EDSFGETRCYVTDPSKIHMGWTVEESKDQHQLKHTWGCFYGEKTRKEEREESIPAVVLENTAYQLPTMPSLSSLTDGISP 240 PKTWTPTVHRQFANASPRDLSLYKGQLGFRKYHPLVEYALPTFLQKDRTGSKQQRTICNAAETVLERRSKPPKQWTWGDP 320 FLSKSWKPETDPVVNQGACGSCYAVSSAYILQKRFEIMFSKLFPGENTTVFESPLSAQSILSCSPYNQGCDGGYPFLVGK 400 HAKEFGFGTEQCQRYSASHDPQVASCQMNIGSVNRTPEHSAPGCGPDDRWYAKDYNYVGGFYEGCNEEKMMNEMYHHGPV 480 VVAIDAPDTLFMYQSGLFDSQPSEHGKICDIPKKGFNGWEYTNHAVAVVGWGEDEPDNATGKPKKFWVVRNTWGSNWGTH 560 GYVKIPRGENMAAIESQAVYFDPDLTRGRAAQLIKQYRKQREA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_267490 2 -----MK|LV 0.112 . TGME49_267490 18 GGLGVAR|AD 0.085 . TGME49_267490 35 DVLGTWK|FT 0.063 . TGME49_267490 62 FNLENLR|PA 0.074 . TGME49_267490 89 ELSLTDK|LI 0.072 . TGME49_267490 92 LTDKLIR|KN 0.085 . TGME49_267490 93 TDKLIRK|NS 0.082 . TGME49_267490 100 NSDMAPR|NN 0.103 . TGME49_267490 104 APRNNWK|YL 0.079 . TGME49_267490 113 AVTLPSK|PD 0.061 . TGME49_267490 132 DEGFEVR|LP 0.082 . TGME49_267490 136 EVRLPNR|RF 0.083 . TGME49_267490 137 VRLPNRR|FF 0.148 . TGME49_267490 143 RFFGFLK|YS 0.067 . TGME49_267490 146 GFLKYSR|KN 0.084 . TGME49_267490 147 FLKYSRK|NG 0.073 . TGME49_267490 150 YSRKNGK|EC 0.066 . TGME49_267490 154 NGKECPR|RL 0.080 . TGME49_267490 155 GKECPRR|LN 0.242 . TGME49_267490 168 DSFGETR|CY 0.073 . TGME49_267490 176 YVTDPSK|IH 0.054 . TGME49_267490 187 WTVEESK|DQ 0.073 . TGME49_267490 193 KDQHQLK|HT 0.097 . TGME49_267490 203 GCFYGEK|TR 0.055 . TGME49_267490 205 FYGEKTR|KE 0.087 . TGME49_267490 206 YGEKTRK|EE 0.069 . TGME49_267490 209 KTRKEER|EE 0.077 . TGME49_267490 242 DGISPPK|TW 0.061 . TGME49_267490 250 WTPTVHR|QF 0.074 . TGME49_267490 258 FANASPR|DL 0.150 . TGME49_267490 264 RDLSLYK|GQ 0.060 . TGME49_267490 270 KGQLGFR|KY 0.084 . TGME49_267490 271 GQLGFRK|YH 0.085 . TGME49_267490 286 LPTFLQK|DR 0.066 . TGME49_267490 288 TFLQKDR|TG 0.120 . TGME49_267490 292 KDRTGSK|QQ 0.062 . TGME49_267490 295 TGSKQQR|TI 0.155 . TGME49_267490 307 AETVLER|RS 0.069 . TGME49_267490 308 ETVLERR|SK 0.198 . TGME49_267490 310 VLERRSK|PP 0.116 . TGME49_267490 313 RRSKPPK|QW 0.117 . TGME49_267490 324 GDPFLSK|SW 0.086 . TGME49_267490 327 FLSKSWK|PE 0.072 . TGME49_267490 353 SAYILQK|RF 0.069 . TGME49_267490 354 AYILQKR|FE 0.123 . TGME49_267490 361 FEIMFSK|LF 0.061 . TGME49_267490 400 YPFLVGK|HA 0.076 . TGME49_267490 403 LVGKHAK|EF 0.099 . TGME49_267490 414 GTEQCQR|YS 0.088 . TGME49_267490 435 NIGSVNR|TP 0.091 . TGME49_267490 449 GCGPDDR|WY 0.088 . TGME49_267490 453 DDRWYAK|DY 0.087 . TGME49_267490 469 EGCNEEK|MM 0.067 . TGME49_267490 507 QPSEHGK|IC 0.086 . TGME49_267490 513 KICDIPK|KG 0.065 . TGME49_267490 514 ICDIPKK|GF 0.120 . TGME49_267490 542 PDNATGK|PK 0.059 . TGME49_267490 544 NATGKPK|KF 0.081 . TGME49_267490 545 ATGKPKK|FW 0.114 . TGME49_267490 550 KKFWVVR|NT 0.116 . TGME49_267490 564 GTHGYVK|IP 0.062 . TGME49_267490 567 GYVKIPR|GE 0.085 . TGME49_267490 587 FDPDLTR|GR 0.081 . TGME49_267490 589 PDLTRGR|AA 0.080 . TGME49_267490 595 RAAQLIK|QY 0.074 . TGME49_267490 598 QLIKQYR|KQ 0.096 . TGME49_267490 599 LIKQYRK|QR 0.087 . TGME49_267490 601 KQYRKQR|EA 0.381 . ____________________________^_________________

  • Fasta :-

    >TGME49_267490 GTGAACCGACCCTGTTAAAGTAGTTTTTACGATGAAACTCGTCGGAATTGGCATTGTTAC GGTAGGCGGGTTAGGTGTGGCCCGGGCTGACCTGCCTATCCACGGGCTGATGAATGATGT CTTGGGAACGTGGAAGTTCACGATCGGAGCTGATGGAAGCGACCATCCAACGTCGTGTGG CAGCGGCGCGCCCAACTTTAACCTTGAGAACCTAAGGCCAGCGTTGAGCAATTACGCCTC GTGGCTCGCGTCACAGAGTCCCGTGGAGACGGAAGTGGAGTTGAGTCTGACGGACAAACT TATTCGAAAGAATAGCGACATGGCGCCGAGGAACAACTGGAAGTATTTAGCTGTTACTCT TCCCTCCAAACCCGACGTACCCGTTGGTACGTGGACGATGGTCTACGATGAAGGCTTTGA GGTTCGGCTGCCGAACCGCCGCTTTTTCGGTTTCTTGAAGTACTCTCGAAAGAACGGTAA AGAGTGTCCTAGAAGGCTGAATGGAGACAATGAGGATTCTTTCGGGGAAACAAGGTGTTA CGTAACGGACCCTAGCAAGATACATATGGGATGGACAGTTGAGGAGTCGAAAGATCAGCA TCAACTGAAACACACTTGGGGGTGTTTCTATGGAGAGAAAACAAGGAAGGAAGAAAGGGA AGAGAGCATTCCAGCTGTTGTTCTTGAAAACACAGCCTATCAGCTGCCCACCATGCCTTC GTTGTCGTCACTCACCGACGGCATATCACCACCGAAGACCTGGACACCTACGGTCCACCG CCAGTTTGCCAATGCCTCGCCTCGGGATCTTTCCCTGTACAAGGGACAGCTGGGTTTTCG GAAGTATCACCCGCTTGTAGAATATGCTCTGCCAACTTTTCTACAGAAAGATCGAACTGG AAGTAAACAGCAACGTACCATATGCAACGCAGCCGAGACCGTTTTAGAACGGCGCAGCAA ACCACCCAAACAATGGACATGGGGAGACCCATTTCTTTCCAAGTCATGGAAGCCGGAAAC AGATCCCGTGGTCAATCAGGGGGCTTGCGGGAGCTGCTACGCTGTCTCGTCTGCGTATAT CTTGCAGAAGCGATTCGAAATTATGTTCAGCAAGCTGTTTCCGGGAGAAAATACGACTGT TTTCGAATCGCCTCTGTCTGCCCAGTCCATTTTGAGCTGCTCTCCTTACAATCAAGGGTG CGACGGTGGATATCCGTTCCTGGTGGGAAAGCATGCCAAGGAATTTGGCTTTGGTACGGA ACAATGCCAGAGATATTCTGCCAGCCACGATCCCCAAGTTGCTTCTTGTCAGATGAATAT CGGCTCAGTGAACAGAACACCAGAACACTCTGCCCCAGGATGCGGACCAGATGATCGCTG GTACGCGAAGGATTACAACTACGTTGGCGGTTTCTACGAAGGGTGCAACGAGGAAAAGAT GATGAATGAGATGTATCATCATGGGCCAGTCGTGGTTGCGATTGATGCGCCAGACACACT CTTCATGTATCAAAGCGGATTGTTTGACTCTCAGCCGTCTGAACACGGCAAAATCTGCGA TATCCCCAAGAAAGGCTTCAACGGTTGGGAGTACACAAACCATGCAGTTGCGGTGGTGGG TTGGGGAGAAGATGAACCTGACAATGCTACAGGAAAACCAAAGAAGTTCTGGGTTGTGAG AAACACTTGGGGCAGCAACTGGGGAACTCATGGCTACGTGAAGATACCCAGAGGCGAGAA TATGGCTGCCATCGAATCCCAGGCGGTTTACTTCGACCCAGATCTCACAAGGGGGAGAGC AGCCCAGCTCATCAAGCAGTACAGAAAACAACGTGAAGCATAATACACCCTAGACCGCTT TGCTGACACCAATATTTTCGATCATCTCAGAATTTGTCGGCAACGGCGGGCAGTTGCAAG TGGATGAATCACGTCCAAGTGCACGAAAAGCAACGATTCCGGCCATGAATCAACCAACAC TGCGTTTAACTCTTCCCAGGAGTATGCTGGCTGTAACATTTCTTCTCCGCTCTGCTTACG GGATAAAGACGTCGCATGATGGCATGTGCATAAGATCTAGCTGACTCCTCTCCGCTGGGA GCTTCCAACGACATATCATGATGTTTCCTCAAGCTGACAGCTGCTTCACTTCTCGATAGC AACAAGGTCCTGCGGTTCGGATGCCGGTAGCGTTCTACCTCGTAAAAGCAAAGACGTTCT TCAAAATGTGGTCGCCATGACCTTGTCAAAAACACGAAATAGCAACACACACTGAAACGA ACGCAGCGTATGATCCGTAGCCGCACTCAAGAATCATACGCATTTGTATGTTAATCTTTC TGTTGGACTGGCAGGCTGAGGCTGATGACATCCCATCACTTCGCCTTTACAGCGCCTTTA TCATAAGCCCCCGAAGGATTGACATTCTTCAATACGAGCGAGACAAGCATTTGTCAACGT AGCTTGGATGTTGACAA
  • Download Fasta

  • Fasta :-

    MKLVGIGIVTVGGLGVARADLPIHGLMNDVLGTWKFTIGADGSDHPTSCGSGAPNFNLEN LRPALSNYASWLASQSPVETEVELSLTDKLIRKNSDMAPRNNWKYLAVTLPSKPDVPVGT WTMVYDEGFEVRLPNRRFFGFLKYSRKNGKECPRRLNGDNEDSFGETRCYVTDPSKIHMG WTVEESKDQHQLKHTWGCFYGEKTRKEEREESIPAVVLENTAYQLPTMPSLSSLTDGISP PKTWTPTVHRQFANASPRDLSLYKGQLGFRKYHPLVEYALPTFLQKDRTGSKQQRTICNA AETVLERRSKPPKQWTWGDPFLSKSWKPETDPVVNQGACGSCYAVSSAYILQKRFEIMFS KLFPGENTTVFESPLSAQSILSCSPYNQGCDGGYPFLVGKHAKEFGFGTEQCQRYSASHD PQVASCQMNIGSVNRTPEHSAPGCGPDDRWYAKDYNYVGGFYEGCNEEKMMNEMYHHGPV VVAIDAPDTLFMYQSGLFDSQPSEHGKICDIPKKGFNGWEYTNHAVAVVGWGEDEPDNAT GKPKKFWVVRNTWGSNWGTHGYVKIPRGENMAAIESQAVYFDPDLTRGRAAQLIKQYRKQ REA

  • title: active site
  • coordinates: Q336,C342,H524,N551
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_267490256 SFANASPRDL0.991unspTGME49_267490256 SFANASPRDL0.991unspTGME49_267490256 SFANASPRDL0.991unspTGME49_267490163 SDNEDSFGET0.991unspTGME49_267490204 TYGEKTRKEE0.992unsp

TGME49_067490      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India