TGME49_268910 | signal peptidase I protein

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_IDPredictionOTHERSPmTPCS_Position
TGME49_268910mTP0.2380100.0003630.761627CS pos: 23-24. PRK-QR. Pr: 0.1566
No Results

  • Fasta :-

    >TGME49_268910 MWRQLTRYLRRVPRPAWLVSPRKQRGVPSNSEISLLLQDASSVFYVVSRWAVAVSLCSLC QAYLVWIEQTRGRSMEPTLPAAGGLLVVEKLRRRLYDSSLFSGHPQFERGSIVLLIPPDG DGVVCKRIIGLPGDVLEVARPEQRFVAYEPVLVPPGHVWVQGDNGEASLDSRTYGCVSQG SIIGTAMFSLWPLKFLPLAPPSMNGTRIIATLGSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_268910.fa Sequence name : TGME49_268910 Sequence length : 215 VALUES OF COMPUTED PARAMETERS Coef20 : 4.989 CoefTot : -0.188 ChDiff : 7 ZoneTo : 31 KR : 8 DE : 0 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.553 1.859 0.359 0.627 MesoH : -0.092 0.485 -0.246 0.267 MuHd_075 : 25.445 15.243 5.319 6.989 MuHd_095 : 59.488 26.990 12.089 13.638 MuHd_100 : 61.141 30.884 13.907 14.346 MuHd_105 : 58.687 34.023 14.372 14.243 Hmax_075 : -1.600 4.800 -1.850 2.210 Hmax_095 : 14.700 10.700 2.450 5.512 Hmax_100 : 14.900 15.700 2.450 6.090 Hmax_105 : 11.800 19.950 3.351 5.590 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0028 0.9972 DFMC : 0.0176 0.9824 This protein is probably imported in mitochondria. f(Ser) = 0.0968 f(Arg) = 0.2258 CMi = 0.25063 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 215 TGME49_268910 MWRQLTRYLRRVPRPAWLVSPRKQRGVPSNSEISLLLQDASSVFYVVSRWAVAVSLCSLCQAYLVWIEQTRGRSMEPTLP 80 AAGGLLVVEKLRRRLYDSSLFSGHPQFERGSIVLLIPPDGDGVVCKRIIGLPGDVLEVARPEQRFVAYEPVLVPPGHVWV 160 QGDNGEASLDSRTYGCVSQGSIIGTAMFSLWPLKFLPLAPPSMNGTRIIATLGSS 240 ................................................................................ 80 ................................................................................ 160 ....................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_268910 3 ----MWR|QL 0.104 . TGME49_268910 7 MWRQLTR|YL 0.110 . TGME49_268910 10 QLTRYLR|RV 0.169 . TGME49_268910 11 LTRYLRR|VP 0.111 . TGME49_268910 14 YLRRVPR|PA 0.317 . TGME49_268910 22 AWLVSPR|KQ 0.095 . TGME49_268910 23 WLVSPRK|QR 0.077 . TGME49_268910 25 VSPRKQR|GV 0.364 . TGME49_268910 49 VFYVVSR|WA 0.101 . TGME49_268910 71 VWIEQTR|GR 0.088 . TGME49_268910 73 IEQTRGR|SM 0.188 . TGME49_268910 90 GLLVVEK|LR 0.059 . TGME49_268910 92 LVVEKLR|RR 0.062 . TGME49_268910 93 VVEKLRR|RL 0.097 . TGME49_268910 94 VEKLRRR|LY 0.122 . TGME49_268910 109 GHPQFER|GS 0.083 . TGME49_268910 126 GDGVVCK|RI 0.079 . TGME49_268910 127 DGVVCKR|II 0.169 . TGME49_268910 140 DVLEVAR|PE 0.072 . TGME49_268910 144 VARPEQR|FV 0.120 . TGME49_268910 172 EASLDSR|TY 0.102 . TGME49_268910 194 FSLWPLK|FL 0.067 . TGME49_268910 207 PSMNGTR|II 0.105 . ____________________________^_________________

  • Fasta :-

    >TGME49_268910 TTTTCAGTGGTCCTATGTTGAAAAACGTACCATATGCAAGTTCGACGTATTTGTAAAACT GCGATTGCGTGACCGGACCAGTAGATCGTGCATGCACACAGGTCTCGGAAGACACATGCG AACGCTTCTCACGCGAAAAGGAGAAAGAAATGTGGCGGCAGCTGACGCGATACTTGAGGA GGGTTCCTCGGCCCGCTTGGTTGGTTTCTCCCCGGAAGCAACGCGGAGTTCCTTCCAACT CAGAGATCTCGCTTCTTCTGCAGGATGCATCCAGCGTCTTCTACGTCGTTTCTCGCTGGG CAGTTGCCGTCTCCCTCTGCTCCCTTTGTCAAGCGTACCTCGTCTGGATCGAGCAGACTC GTGGCCGATCGATGGAGCCGACGCTTCCAGCCGCTGGTGGTCTCCTCGTCGTGGAAAAAC TCCGTCGACGACTTTACGACAGTTCTCTGTTCAGTGGACACCCGCAGTTTGAGCGGGGCA GCATCGTTTTGTTGATTCCGCCAGACGGTGATGGAGTCGTGTGCAAGCGAATCATCGGGT TGCCAGGCGACGTGCTCGAAGTTGCAAGACCTGAACAGCGTTTCGTCGCGTACGAACCCG TTCTTGTTCCTCCTGGCCACGTTTGGGTTCAAGGCGACAACGGCGAGGCGTCGCTTGACA GTCGCACTTACGGTTGCGTCAGCCAAGGTTCCATCATCGGGACTGCGATGTTCAGTCTGT GGCCGCTGAAGTTTCTGCCTCTTGCGCCGCCTTCGATGAACGGAACTCGCATTATCGCGA CACTCGGCAGTTCCTGAGTGAAGTTGAGCCGAAATGTTGTCGGCCGTCAACCTCCGCTAA ACAGGGACGCTCAACTATGTCATAGCTGCCACGAAGCTTTGGATTTGTTTCATGACATCA ATACAGGGAAATGAAATCTGTATACGAAGATCAACCCTTGCACCTGCATTTAAATACATG CATGTGTATTTATACTGGTACACCCAACTATATATGCGTGTGCAGAGTACGTGATTGCTT ATAAATGACTGCAAACGTGCATCTGTGGGCAGGAAAAATAAATGCCACATTGCGCATCAT GACCCTCTGCTACTCCGGCAAAAAAGCAGTTTGTTATAACAATCAGCATCACTCGCGCGT GAAAGGCTTCTTGCCTTGCGCATGAGGCATTTGGTACGTTCCGCGTGTAGTTCCTCAGCC GCACGCGATATGTTCCAAAATACGCCCGTAATCAAAAGCTGCCTTTCCTCTTCTCGGTAT ACCACTGGACCAAATAGGACGCACAGGCAAGAAGGTTAAAATTGGCTTGGTACGCTTTGG GATCGCGGAGATCTTCCCAGTCATCCAGCGATATCAT
  • Download Fasta

  • Fasta :-

    MWRQLTRYLRRVPRPAWLVSPRKQRGVPSNSEISLLLQDASSVFYVVSRWAVAVSLCSLC QAYLVWIEQTRGRSMEPTLPAAGGLLVVEKLRRRLYDSSLFSGHPQFERGSIVLLIPPDG DGVVCKRIIGLPGDVLEVARPEQRFVAYEPVLVPPGHVWVQGDNGEASLDSRTYGCVSQG SIIGTAMFSLWPLKFLPLAPPSMNGTRIIATLGSS

  • title: Catalytic site
  • coordinates: S74,K126
No Results
No Results
IDSitePeptideScoreMethod
TGME49_26891074 STRGRSMEPT0.995unsp

TGME49_068910      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India