TGME49_276130 | cathepsin CPC2

_IDPredictionOTHERSPmTPCS_Position
TGME49_276130SP0.3865140.6131460.000340CS pos: 45-46. ANG-DL. Pr: 0.3419
No Results

  • Fasta :-

    >TGME49_276130 MSAAVEPRGRLSDGCCRRRLTPAAVLFLCRVLVLFWVNEAEPANGDLPAHCLVKHVLGEW EIQEGLWLPCQEEGNLTTDAARLHDPYCGYGIPDRVDAHGPMTPPNVSASFHALRTSRFT LFPDFRIEFEDGSSGLWTLVYDEGLHFEVSTPQNRRFFAFFKYQLAPDGQNRAWSYCHTT LVGWWERPAAPNLSLQDVEKAPPVYDIPEPIAPDTAADALLKSVKRGCWWGRKVGEDLSV PTNEVPKERRTPLEVPLWPTSRPPDVRTVAAVVRKNLAADAPWEPLDEEYVEIRGRKLRT MEEVWAHAGHQPLLISRQNIESTHLTLSVRPPLHLLAGIKPFGSPAGSDPPWRTVRDFDW ANEDHVALRIGRRQSVIPDAPNQGGCGSCYAIATGTVLTSRLWIRYAANDDVFGKVNVSA FQGTSCNVYNQGCGGGYVFLALKFGQEHGFRTEDCVSEYHAMADKHKGSLSPNLQTCFDL GGQLGTSAFGCQAPPARASLPDSCNLSVKVTSWHYVGGVYGGCSEDDMLRTLWEHGPMAA SIEPTIAFTVYKKGVFRAAYNSLVEQGDNWVWEKVDHAVVISGWGWAKHGDSWLPYWKVR NSWGTKWGEGGYARVLRGVNEMAIERVAVVGEVSLFRGGEHIPPLLARSLDSQGSSNASK DSERGETLVESVSPVFRGSASGSESGNPRDAATNESADMSESADADAESSSGSDDDEDGD MEKGDVESTTKQTTLFRPIQRHGEVLEEKRTGE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_276130.fa Sequence name : TGME49_276130 Sequence length : 753 VALUES OF COMPUTED PARAMETERS Coef20 : 4.583 CoefTot : 0.394 ChDiff : -25 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.471 2.118 0.366 0.654 MesoH : -0.217 0.232 -0.222 0.226 MuHd_075 : 30.038 17.505 8.276 6.151 MuHd_095 : 34.774 19.035 10.087 5.653 MuHd_100 : 33.077 18.587 9.276 5.237 MuHd_105 : 24.950 14.210 7.220 3.687 Hmax_075 : -2.683 5.133 0.426 0.572 Hmax_095 : 0.100 7.600 1.868 0.730 Hmax_100 : 1.000 8.900 1.868 1.250 Hmax_105 : 10.267 8.400 4.964 2.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9073 0.0927 DFMC : 0.9533 0.0467
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 753 TGME49_276130 MSAAVEPRGRLSDGCCRRRLTPAAVLFLCRVLVLFWVNEAEPANGDLPAHCLVKHVLGEWEIQEGLWLPCQEEGNLTTDA 80 ARLHDPYCGYGIPDRVDAHGPMTPPNVSASFHALRTSRFTLFPDFRIEFEDGSSGLWTLVYDEGLHFEVSTPQNRRFFAF 160 FKYQLAPDGQNRAWSYCHTTLVGWWERPAAPNLSLQDVEKAPPVYDIPEPIAPDTAADALLKSVKRGCWWGRKVGEDLSV 240 PTNEVPKERRTPLEVPLWPTSRPPDVRTVAAVVRKNLAADAPWEPLDEEYVEIRGRKLRTMEEVWAHAGHQPLLISRQNI 320 ESTHLTLSVRPPLHLLAGIKPFGSPAGSDPPWRTVRDFDWANEDHVALRIGRRQSVIPDAPNQGGCGSCYAIATGTVLTS 400 RLWIRYAANDDVFGKVNVSAFQGTSCNVYNQGCGGGYVFLALKFGQEHGFRTEDCVSEYHAMADKHKGSLSPNLQTCFDL 480 GGQLGTSAFGCQAPPARASLPDSCNLSVKVTSWHYVGGVYGGCSEDDMLRTLWEHGPMAASIEPTIAFTVYKKGVFRAAY 560 NSLVEQGDNWVWEKVDHAVVISGWGWAKHGDSWLPYWKVRNSWGTKWGEGGYARVLRGVNEMAIERVAVVGEVSLFRGGE 640 HIPPLLARSLDSQGSSNASKDSERGETLVESVSPVFRGSASGSESGNPRDAATNESADMSESADADAESSSGSDDDEDGD 720 MEKGDVESTTKQTTLFRPIQRHGEVLEEKRTGE 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_276130 8 SAAVEPR|GR 0.093 . TGME49_276130 10 AVEPRGR|LS 0.080 . TGME49_276130 17 LSDGCCR|RR 0.060 . TGME49_276130 18 SDGCCRR|RL 0.142 . TGME49_276130 19 DGCCRRR|LT 0.110 . TGME49_276130 30 AVLFLCR|VL 0.062 . TGME49_276130 54 PAHCLVK|HV 0.074 . TGME49_276130 82 LTTDAAR|LH 0.078 . TGME49_276130 95 GYGIPDR|VD 0.089 . TGME49_276130 115 ASFHALR|TS 0.078 . TGME49_276130 118 HALRTSR|FT 0.173 . TGME49_276130 126 TLFPDFR|IE 0.088 . TGME49_276130 155 VSTPQNR|RF 0.078 . TGME49_276130 156 STPQNRR|FF 0.114 . TGME49_276130 162 RFFAFFK|YQ 0.062 . TGME49_276130 172 APDGQNR|AW 0.129 . TGME49_276130 187 LVGWWER|PA 0.099 . TGME49_276130 200 SLQDVEK|AP 0.062 . TGME49_276130 222 AADALLK|SV 0.095 . TGME49_276130 225 ALLKSVK|RG 0.059 . TGME49_276130 226 LLKSVKR|GC 0.234 . TGME49_276130 232 RGCWWGR|KV 0.165 . TGME49_276130 233 GCWWGRK|VG 0.066 . TGME49_276130 247 PTNEVPK|ER 0.064 . TGME49_276130 249 NEVPKER|RT 0.084 . TGME49_276130 250 EVPKERR|TP 0.096 . TGME49_276130 262 PLWPTSR|PP 0.077 . TGME49_276130 267 SRPPDVR|TV 0.144 . TGME49_276130 274 TVAAVVR|KN 0.089 . TGME49_276130 275 VAAVVRK|NL 0.099 . TGME49_276130 294 EEYVEIR|GR 0.073 . TGME49_276130 296 YVEIRGR|KL 0.095 . TGME49_276130 297 VEIRGRK|LR 0.165 . TGME49_276130 299 IRGRKLR|TM 0.450 . TGME49_276130 317 QPLLISR|QN 0.084 . TGME49_276130 330 HLTLSVR|PP 0.076 . TGME49_276130 340 HLLAGIK|PF 0.061 . TGME49_276130 353 GSDPPWR|TV 0.144 . TGME49_276130 356 PPWRTVR|DF 0.455 . TGME49_276130 369 EDHVALR|IG 0.082 . TGME49_276130 372 VALRIGR|RQ 0.186 . TGME49_276130 373 ALRIGRR|QS 0.092 . TGME49_276130 401 GTVLTSR|LW 0.074 . TGME49_276130 405 TSRLWIR|YA 0.110 . TGME49_276130 415 NDDVFGK|VN 0.062 . TGME49_276130 443 YVFLALK|FG 0.056 . TGME49_276130 451 GQEHGFR|TE 0.077 . TGME49_276130 465 YHAMADK|HK 0.067 . TGME49_276130 467 AMADKHK|GS 0.065 . TGME49_276130 497 CQAPPAR|AS 0.084 . TGME49_276130 509 SCNLSVK|VT 0.077 . TGME49_276130 530 SEDDMLR|TL 0.087 . TGME49_276130 552 IAFTVYK|KG 0.054 . TGME49_276130 553 AFTVYKK|GV 0.119 . TGME49_276130 557 YKKGVFR|AA 0.133 . TGME49_276130 574 DNWVWEK|VD 0.067 . TGME49_276130 588 SGWGWAK|HG 0.071 . TGME49_276130 598 SWLPYWK|VR 0.053 . TGME49_276130 600 LPYWKVR|NS 0.111 . TGME49_276130 606 RNSWGTK|WG 0.076 . TGME49_276130 614 GEGGYAR|VL 0.110 . TGME49_276130 617 GYARVLR|GV 0.448 . TGME49_276130 626 NEMAIER|VA 0.093 . TGME49_276130 637 GEVSLFR|GG 0.102 . TGME49_276130 648 IPPLLAR|SL 0.241 . TGME49_276130 660 GSSNASK|DS 0.140 . TGME49_276130 664 ASKDSER|GE 0.096 . TGME49_276130 677 SVSPVFR|GS 0.121 . TGME49_276130 689 SESGNPR|DA 0.215 . TGME49_276130 723 EDGDMEK|GD 0.058 . TGME49_276130 731 DVESTTK|QT 0.058 . TGME49_276130 737 KQTTLFR|PI 0.090 . TGME49_276130 741 LFRPIQR|HG 0.091 . TGME49_276130 749 GEVLEEK|RT 0.072 . TGME49_276130 750 EVLEEKR|TG 0.119 . ____________________________^_________________

  • Fasta :-

    >TGME49_276130 TTCTCGCATCTCGGCCCCTCGCGTTAGGAGCGAGCACCCCGCTCTCGTGTCTGCATTTTC TTCCAAGAAAGAGAAAGACAAGCACCGCAAAAGTCGTCAGAAACGTCGGTTGTTCCAGTC AAAGCTGCACTGGGTGTTCCATGTCTTCTTGAGCTAGCCTCCCTGAGACGCAGCCCGCTT CCGAGGAACTAGCCAGGAAGAACGGGGTGAGTTCTAGCGTTGTGTCGGCGCATTCTTCCA CAGTTTTGCGTTTCCGGAACGCCGCGTTCCTCTCTCAGTTCACTGAGTTTCTTGTCTTGT CGGATTTAGTGAAGAAGTCGCTCGACAGCCACACCTGGAACTCGTGGAAATACCCCGCGA ATTCCTGCCCCCGCACAGCGAACCGGCTGCGAGCGCAGGCGCCAGTGTTCATTTGTCTGT CTCTTTTTCTGGATTTTTGCCGTCGTTTTTCCCTCGAGTACCCTGTCGAGTTCAACCGGC AAATATGCCGTTGACCGGGCCCCGCGGAGCTCTCGATGGATGCGGTAAAAGCGAGGTTTC AACGGAGTGGAAGCTCGGCGAGAACCCCAGATCTCGCGCATGCGCTGTCTTGTGGCCGGG GATATCAAGAGGGTCAAGAGAAACAGCTCGAGTTTCCAGCGGAGCTGAAAAAAAAGCTGA TGTAAAATGCACTTGAGGTCGACAGACACTCTGTTGAACAAGCCCTGCGTTTCGCAACTG GACCAACGAGATGTTTTTGATATCCTCACGGTTTCTTTCCTTTAAAAATCCGTCTCGTGA CCTGTTTCACCCCACGACAATCCGTCAAGTCAACAAGCAAGGTCCAGGGAATCGAAGTCG TCTTTGTAAATCTACTCCTCCTGCTTCCGGTTAATATTGACGCAGTCATAAATAAATAAC ATTTATGTAAACAGCATTTATAAACAATATATATATATATATATACATGTATATAAACAG TATATATACATACTATATACATATATCCATATAGATATAGATATATGTAGAGGCAGAGAG AGCTCTGAGAGGGAGTTTTCGTTCTGACGAACAGTTGCAGTTTCTTCTTCAGAGAAATCC GGGAGAATTCGTTGTGTTGGCGAACTCGCTTCCTCCTTTCCTTCGAAGGCAAATGGTGGG TGAGGATTTTCTGTTGACGCTCCGAAGGTGACATTTGGGGAGAGGCCGACTCTCGACCCT CTGTGACGAGATATCCGGCACAAGCATTTCCGATGTCGGCGGCTGTGGAGCCTCGCGGCC GTCTTTCTGATGGCTGCTGCAGACGACGGCTGACGCCGGCAGCGGTCCTCTTTCTCTGCC GCGTACTCGTCTTGTTCTGGGTGAACGAAGCAGAACCGGCGAACGGGGACTTGCCTGCCC ACTGTCTCGTGAAACATGTCTTAGGAGAATGGGAGATTCAAGAAGGTCTCTGGCTCCCCT GCCAAGAAGAAGGAAACCTGACGACTGACGCGGCCCGACTGCACGATCCGTACTGCGGAT ACGGCATCCCAGACAGAGTTGACGCACATGGTCCGATGACGCCTCCCAATGTTTCGGCGA GTTTCCACGCGCTGCGGACCTCGCGCTTCACTCTGTTTCCGGATTTCCGTATCGAATTTG AGGACGGCTCCTCCGGTCTCTGGACTCTAGTGTACGACGAGGGCCTTCACTTCGAGGTTT CGACTCCGCAAAACAGGCGTTTCTTTGCTTTCTTCAAATACCAACTGGCTCCGGACGGTC AGAACCGCGCCTGGAGCTACTGTCACACGACTTTGGTCGGCTGGTGGGAACGCCCTGCTG CCCCAAACCTGTCTCTCCAAGACGTCGAGAAAGCTCCGCCGGTCTACGACATCCCGGAGC CCATTGCCCCCGATACTGCTGCTGACGCGTTGCTGAAGTCGGTCAAACGAGGCTGTTGGT GGGGAAGAAAAGTAGGCGAAGACCTTTCCGTTCCGACCAACGAAGTCCCCAAGGAACGCC GCACCCCTCTGGAAGTCCCTCTGTGGCCTACTTCTCGTCCGCCTGACGTCCGAACGGTTG CTGCTGTCGTGAGGAAGAATCTCGCCGCGGATGCCCCATGGGAGCCTTTGGACGAGGAGT ATGTCGAAATTCGAGGGAGAAAGCTGCGCACAATGGAGGAGGTCTGGGCGCATGCAGGAC ACCAGCCTCTGTTGATTTCCAGGCAAAACATAGAGTCGACGCACTTGACACTCAGTGTCA GACCTCCCCTTCATTTGCTCGCTGGGATAAAGCCTTTTGGAAGTCCTGCAGGATCCGATC CGCCCTGGCGAACCGTTCGCGACTTCGACTGGGCTAACGAAGACCATGTCGCTCTCAGGA TCGGACGGCGACAGTCAGTTATTCCAGATGCCCCGAATCAAGGAGGCTGTGGTTCTTGCT ACGCGATCGCAACTGGAACTGTCCTCACTTCAAGACTCTGGATTCGATACGCAGCGAACG ACGACGTTTTCGGCAAGGTCAACGTCAGCGCTTTCCAGGGAACAAGCTGCAACGTGTACA ACCAAGGGTGCGGCGGCGGCTACGTATTCCTGGCGCTGAAGTTCGGGCAGGAACATGGCT TCCGTACAGAAGACTGCGTCAGCGAATACCACGCCATGGCTGACAAGCACAAAGGTTCAC TTTCGCCGAACTTGCAGACTTGTTTCGACCTTGGCGGCCAGCTCGGGACCTCAGCGTTCG GCTGCCAGGCACCTCCAGCTCGAGCTTCTCTGCCGGATTCCTGCAATTTATCTGTCAAAG TGACTTCTTGGCACTATGTCGGAGGCGTTTACGGAGGGTGTTCGGAGGACGACATGCTGC GAACGCTCTGGGAGCATGGTCCGATGGCAGCATCCATCGAACCTACGATTGCTTTCACTG TCTACAAGAAGGGCGTTTTCAGAGCTGCGTACAACAGCCTCGTCGAGCAGGGGGACAACT GGGTCTGGGAGAAGGTCGACCATGCCGTGGTTATTTCCGGCTGGGGCTGGGCGAAGCACG GAGATTCGTGGCTGCCGTACTGGAAAGTTCGGAATTCATGGGGAACGAAATGGGGAGAAG GCGGCTACGCACGAGTGCTGCGAGGTGTCAACGAAATGGCAATCGAGCGCGTCGCTGTTG TCGGGGAAGTTTCGCTTTTTCGCGGGGGGGAACACATTCCACCCTTGCTCGCAAGGTCTC TCGATTCACAGGGAAGTTCGAACGCTTCCAAAGACAGCGAAAGGGGGGAGACGCTGGTCG AATCTGTGAGTCCCGTTTTCCGCGGAAGCGCGTCGGGTTCCGAAAGTGGAAACCCAAGAG ACGCGGCGACGAATGAAAGTGCAGACATGTCGGAGTCTGCAGACGCAGACGCAGAGTCTT CGTCGGGGAGTGACGATGACGAAGACGGGGATATGGAGAAAGGTGATGTGGAGTCGACAA CAAAACAAACGACTCTTTTCCGGCCTATCCAGCGTCACGGCGAAGTGTTGGAAGAAAAGA GAACGGGTGAATGAAAAAAGGCTTTCAATCGACTCTTTAGGTGGAGCGAAAAACGCCAGC TGTGTCCGGGCGAACGTTCGCAGAAGCAAAAGGATTTCTGAGTCACCGGTTCGCAACTTG CGGCCGTGTTTCGACTTCGTCCCCCGTGAAAAAAAACGTTTGAATGGTAAATCCAAGCAA AAGCGGTTGGACGGCTCAGTAGGATTCAGACGCGTGCGTGAAACGCGTTTGAGGTTGTTT TTCTTGAAATTGTTTTGTGTCGCATCTAGCGACGTCCGGAGACCATTTTGTTACGGCCAA ACTCCAATGACAGTGAGCGATTTCCGGGTTGAAGCTTTCCTGTCTCCCGGCAACTGTTAC ATTTCTGCTGTTTTCCGTTCGATGCGCATAAAGGCTGAAAATGACGGCTCTGACCTCCGG
  • Download Fasta

  • Fasta :-

    MSAAVEPRGRLSDGCCRRRLTPAAVLFLCRVLVLFWVNEAEPANGDLPAHCLVKHVLGEW EIQEGLWLPCQEEGNLTTDAARLHDPYCGYGIPDRVDAHGPMTPPNVSASFHALRTSRFT LFPDFRIEFEDGSSGLWTLVYDEGLHFEVSTPQNRRFFAFFKYQLAPDGQNRAWSYCHTT LVGWWERPAAPNLSLQDVEKAPPVYDIPEPIAPDTAADALLKSVKRGCWWGRKVGEDLSV PTNEVPKERRTPLEVPLWPTSRPPDVRTVAAVVRKNLAADAPWEPLDEEYVEIRGRKLRT MEEVWAHAGHQPLLISRQNIESTHLTLSVRPPLHLLAGIKPFGSPAGSDPPWRTVRDFDW ANEDHVALRIGRRQSVIPDAPNQGGCGSCYAIATGTVLTSRLWIRYAANDDVFGKVNVSA FQGTSCNVYNQGCGGGYVFLALKFGQEHGFRTEDCVSEYHAMADKHKGSLSPNLQTCFDL GGQLGTSAFGCQAPPARASLPDSCNLSVKVTSWHYVGGVYGGCSEDDMLRTLWEHGPMAA SIEPTIAFTVYKKGVFRAAYNSLVEQGDNWVWEKVDHAVVISGWGWAKHGDSWLPYWKVR NSWGTKWGEGGYARVLRGVNEMAIERVAVVGEVSLFRGGEHIPPLLARSLDSQGSSNASK DSERGETLVESVSPVFRGSASGSESGNPRDAATNESADMSESADADAESSSGSDDDEDGD MEKGDVESTTKQTTLFRPIQRHGEVLEEKRTGE

  • title: active site
  • coordinates: Q383,C389,H577,N601
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_276130375 SGRRQSVIPD0.995unspTGME49_276130375 SGRRQSVIPD0.995unspTGME49_276130375 SGRRQSVIPD0.995unspTGME49_276130499 SPARASLPDS0.994unspTGME49_276130681 SRGSASGSES0.99unspTGME49_276130711 SAESSSGSDD0.997unspTGME49_276130713 SSSSGSDDDE0.997unspTGME49_27613021 TRRRLTPAAV0.992unspTGME49_276130223 SALLKSVKRG0.991unsp

TGME49_076130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India