TGME49_277500 | 26S proteasome regulatory subunit 7, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_277500OTHER0.9999850.0000070.000009
No Results

  • Fasta :-

    >TGME49_277500 MANHKETEPPHAPEAAERPKAKKDAAHEDEEPKKTIPLDDADINILKSYGLSPYAFAIKR LDTDIKSLTEKITKLCGVRESDTGLCQPSQWDLAADKQLMQEQPLQVARCTKIIYPGGQT RGGENGENGESGGAGTTAPPPFGGDDEEPKYIINVKQIAKFVVGLGEKVAAMDIEEGMRV GVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKLREVLELPLLHPER FLSLGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQKYVGEGARMVREL FQMARSRRACILFIDEVDAIGGSRGGEGEGNAHGDHEVQRTMLEIVNQLDGFEARGNIKV LMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTHIFKIHAKTLSVDRNIRYELLARLC PNSTGADIRSVCTEAGILAIRARKKSISEKNFIDAINRVIKGYKKFSATAKYMVYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_277500.fa Sequence name : TGME49_277500 Sequence length : 476 VALUES OF COMPUTED PARAMETERS Coef20 : 2.561 CoefTot : -0.345 ChDiff : -1 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.406 1.247 0.094 0.446 MesoH : -0.820 0.308 -0.348 0.169 MuHd_075 : 25.717 15.587 6.060 4.984 MuHd_095 : 22.837 12.779 4.865 4.199 MuHd_100 : 22.310 15.544 6.315 4.576 MuHd_105 : 19.413 14.203 7.120 4.047 Hmax_075 : -8.750 -3.150 -5.442 0.499 Hmax_095 : -6.000 -2.600 -4.728 0.960 Hmax_100 : -1.000 0.200 -2.961 1.240 Hmax_105 : -3.033 1.983 -2.775 1.587 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9761 0.0239 DFMC : 0.9783 0.0217
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 476 TGME49_277500 MANHKETEPPHAPEAAERPKAKKDAAHEDEEPKKTIPLDDADINILKSYGLSPYAFAIKRLDTDIKSLTEKITKLCGVRE 80 SDTGLCQPSQWDLAADKQLMQEQPLQVARCTKIIYPGGQTRGGENGENGESGGAGTTAPPPFGGDDEEPKYIINVKQIAK 160 FVVGLGEKVAAMDIEEGMRVGVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKLREVLELPLLHPER 240 FLSLGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQKYVGEGARMVRELFQMARSRRACILFIDEVDAI 320 GGSRGGEGEGNAHGDHEVQRTMLEIVNQLDGFEARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTHIFKI 400 HAKTLSVDRNIRYELLARLCPNSTGADIRSVCTEAGILAIRARKKSISEKNFIDAINRVIKGYKKFSATAKYMVYN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................P.................. 400 ............................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_277500 5 --MANHK|ET 0.062 . TGME49_277500 18 APEAAER|PK 0.098 . TGME49_277500 20 EAAERPK|AK 0.072 . TGME49_277500 22 AERPKAK|KD 0.093 . TGME49_277500 23 ERPKAKK|DA 0.173 . TGME49_277500 33 HEDEEPK|KT 0.064 . TGME49_277500 34 EDEEPKK|TI 0.082 . TGME49_277500 47 ADINILK|SY 0.079 . TGME49_277500 59 PYAFAIK|RL 0.065 . TGME49_277500 60 YAFAIKR|LD 0.135 . TGME49_277500 66 RLDTDIK|SL 0.085 . TGME49_277500 71 IKSLTEK|IT 0.069 . TGME49_277500 74 LTEKITK|LC 0.065 . TGME49_277500 79 TKLCGVR|ES 0.105 . TGME49_277500 97 WDLAADK|QL 0.070 . TGME49_277500 109 QPLQVAR|CT 0.132 . TGME49_277500 112 QVARCTK|II 0.208 . TGME49_277500 121 YPGGQTR|GG 0.149 . TGME49_277500 150 GDDEEPK|YI 0.072 . TGME49_277500 156 KYIINVK|QI 0.069 . TGME49_277500 160 NVKQIAK|FV 0.077 . TGME49_277500 168 VVGLGEK|VA 0.055 . TGME49_277500 179 DIEEGMR|VG 0.062 . TGME49_277500 184 MRVGVDR|NK 0.128 . TGME49_277500 186 VGVDRNK|YK 0.065 . TGME49_277500 188 VDRNKYK|IQ 0.072 . TGME49_277500 196 QIPLPPK|ID 0.061 . TGME49_277500 209 MMTVEEK|PD 0.061 . TGME49_277500 221 NDVGGAK|EQ 0.060 . TGME49_277500 226 AKEQLEK|LR 0.059 . TGME49_277500 228 EQLEKLR|EV 0.094 . TGME49_277500 240 PLLHPER|FL 0.114 . TGME49_277500 250 LGIDPPK|GV 0.076 . TGME49_277500 262 GPPGTGK|TL 0.062 . TGME49_277500 267 GKTLTAR|AV 0.113 . TGME49_277500 272 ARAVANR|TD 0.087 . TGME49_277500 288 GSELVQK|YV 0.154 . TGME49_277500 295 YVGEGAR|MV 0.138 . TGME49_277500 298 EGARMVR|EL 0.260 . TGME49_277500 305 ELFQMAR|SR 0.114 . TGME49_277500 307 FQMARSR|RA 0.102 . TGME49_277500 308 QMARSRR|AC 0.476 . TGME49_277500 324 DAIGGSR|GG 0.092 . TGME49_277500 340 GDHEVQR|TM 0.112 . TGME49_277500 355 LDGFEAR|GN 0.160 . TGME49_277500 359 EARGNIK|VL 0.059 . TGME49_277500 366 VLMATNR|PD 0.076 . TGME49_277500 376 LDPALLR|PG 0.069 . TGME49_277500 379 ALLRPGR|LD 0.253 . TGME49_277500 382 RPGRLDR|KV 0.591 *ProP* TGME49_277500 383 PGRLDRK|VE 0.066 . TGME49_277500 394 LPDLEGR|TH 0.084 . TGME49_277500 399 GRTHIFK|IH 0.062 . TGME49_277500 403 IFKIHAK|TL 0.073 . TGME49_277500 409 KTLSVDR|NI 0.084 . TGME49_277500 412 SVDRNIR|YE 0.147 . TGME49_277500 418 RYELLAR|LC 0.069 . TGME49_277500 429 STGADIR|SV 0.251 . TGME49_277500 441 AGILAIR|AR 0.074 . TGME49_277500 443 ILAIRAR|KK 0.162 . TGME49_277500 444 LAIRARK|KS 0.166 . TGME49_277500 445 AIRARKK|SI 0.238 . TGME49_277500 450 KKSISEK|NF 0.089 . TGME49_277500 458 FIDAINR|VI 0.071 . TGME49_277500 461 AINRVIK|GY 0.163 . TGME49_277500 464 RVIKGYK|KF 0.067 . TGME49_277500 465 VIKGYKK|FS 0.100 . TGME49_277500 471 KFSATAK|YM 0.076 . ____________________________^_________________

  • Fasta :-

    >TGME49_277500 CAAGTCCGCGCCTACGTCCCCGGAGGGGAGAAGCTAAGGCAAGAAAAGACAAGAGCGAAA GCCTCCGTTTTCTTCCGCGCGCGCGCGGCGGGCCGTCTTTGCGCGGCGCGAAGGCCGTTT GGACCGCGAGAAAAAAGTCGGTTCGCGTTCCAAACGCCACAGTGGCATTGAGGAGGGACA TGGCCTTGGAAAGAGGCACTGTTCACTGGCGACGTACGCGAGAGGAATGTGTGAAGGAAG GCGAGCAAGGAGAGAGAACGCAGAAGGCCGGTTTCTCTTCGCAGGTCAAGTGCTTCGCTT CTCTCGCGTCTTTTCTTGGAGTTGCACGGAAAGAAAGACCCGACAAGACCGTCGCGAAAC TCTTTGCCTTTTCGCAGGACGCCACGCTGCACACTCTGGACAGCTGCTCTCACGCCAAGT TTACAGACGCCGCACTGAAGCTTTTTTTCCAACTTTGGGGCGGTTGTTCCTTGTTCTTTC GCGGACGTACACGGACAAGACGCGACTGGTTCGGAATTTGTCTCTTTCGGCCCTCCCTTT TCATGTCTTTCTTCTGTCAGCGTCTCTCCTCAAGTGTTCACCGCACTCCTTTTTTTGCAT GCTCCGTCTTCTGCTCTCTGCCTGTGGTGCACCGGAAGCGACTGCTCCGTCGTTTCGTCC TGTCTTCCTGGCCTTCGAACTCTCCGCCGCCGCGCGGTGTCTCTTATCGGCAGACCCACT GACTGCATCCCCGTCTCTCTCCGCTCCTGTTCGCTTACGTCCTCTCTCCTCTCTCCTTTC TGCTTCCTCTCTCTCTCTCTCGTTCTTCCCCTCGGTCGTCTTCTCTCTCTCCGCTGCTGC TGCCTCCGCGCTGCACTGCGTCTGCCGGCTGGAGCGCGCCTGGAGACCAAGCTGAAAGAC GCAGGTCGCCTGTCACTCCGGAGTCAGCTCTCCTCGCTAGTGACCGCCAGCTTCTCTTCG GTCTCGGCGAACGGCGCTCTTCGCTTTCTGCCTTCCCTCTCGCCTTCTGCCTTCCCTCTC GCCTTCTGAAAATGGCGAACCACAAGGAGACCGAGCCCCCTCACGCCCCAGAGGCGGCGG AACGACCCAAGGCGAAGAAGGACGCTGCTCACGAGGACGAGGAGCCGAAGAAAACGATTC CCCTCGACGACGCAGATATCAACATTCTCAAGTCCTACGGACTGTCTCCGTACGCCTTCG CGATCAAGCGCCTGGACACAGACATCAAGAGCTTGACTGAAAAGATAACGAAGCTCTGCG GTGTGCGCGAGAGCGACACTGGCCTCTGCCAGCCTTCGCAGTGGGACTTGGCGGCGGACA AGCAGCTGATGCAGGAGCAGCCGCTGCAGGTCGCGCGATGCACGAAGATCATCTATCCCG GCGGTCAGACGCGAGGCGGCGAAAACGGAGAAAACGGCGAGAGCGGTGGCGCAGGAACGA CCGCTCCGCCCCCGTTTGGAGGAGACGACGAGGAACCCAAGTACATCATTAACGTCAAAC AAATCGCGAAATTCGTCGTCGGACTCGGCGAGAAAGTCGCCGCCATGGACATCGAAGAAG GCATGCGCGTCGGAGTCGACCGCAACAAGTACAAGATTCAGATTCCTCTTCCGCCCAAGA TCGACCCCACAGTCACGATGATGACAGTTGAAGAGAAACCCGATGTAACCTACAACGACG TTGGAGGCGCGAAGGAGCAGCTGGAAAAACTGAGAGAAGTTCTTGAACTTCCTCTCCTCC ATCCAGAGAGATTTCTCTCTCTTGGCATCGATCCACCCAAAGGAGTGCTCCTCTACGGAC CCCCCGGCACAGGGAAAACGCTCACCGCTCGTGCTGTCGCCAATCGAACAGACGCATGCT TCATCTGCGTCATCGGCTCCGAACTCGTACAAAAGTATGTCGGCGAGGGCGCGCGAATGG TGCGCGAGTTGTTTCAGATGGCGCGCAGCAGACGTGCATGCATTTTATTCATCGACGAAG TGGACGCGATCGGCGGGAGTCGAGGCGGAGAGGGAGAAGGCAACGCCCACGGAGACCACG AGGTCCAGAGGACCATGCTCGAAATCGTCAATCAACTGGACGGCTTCGAGGCTCGCGGAA ACATCAAAGTCCTCATGGCCACCAACCGTCCAGACACTCTGGACCCTGCGCTGCTTCGTC CCGGTCGTCTCGACAGAAAAGTCGAGTTCGGCCTTCCGGACCTCGAAGGACGAACACACA TCTTCAAGATCCACGCAAAGACTCTCAGCGTCGACCGCAACATACGCTACGAACTCCTCG CCCGGCTCTGCCCCAACAGCACAGGCGCTGACATTCGTTCCGTCTGTACAGAGGCAGGCA TCTTGGCTATTCGCGCAAGAAAAAAGAGCATCAGCGAGAAGAACTTCATCGACGCAATCA ACCGAGTCATCAAAGGCTACAAGAAATTCAGTGCGACTGCCAAGTACATGGTGTACAACT GAGGCTCTTGTCTCCTCCGTCTCCCCTGCTCGGTGCTCTTTGGGGCCGTGTCTGTTTTCG CGGCTAGGCGGCAGGAGGCAGATTTTCCTACGCGTCCGGAGATCACTGTCTGTTTCCAAA CGCGCTGGTGTTCAGTCGCGCCAACGTCCCCTCCAGCTCTCTTCTCTTTTGTACCACTCC GCATCGGGAAAAGCACGGACCTCTCTTTCCGTATGCTCGACGCAAGCGCATCTATACATT CATACTTCCGTACATGCAGGTGGATACACATAAATATAGATGTGCACGTGCATGTATGTA TATATATATATATATGTATATATATGTATATATATGTATATATATATATATCTATGTATA TGTATATATATCTGAATGTATGTATGTGAATATGTGGTTCTGGGTGTATGTATACGCATG TGTAGAGATGGGTGGCTCCCTTGGTCTGGTGACCGATTTGGAATAGAACAAGTGTGGGGA GAAGGAAGATTCATCGCACTGTCAGTTGTCTCCAGTCGACTGCGGGGACATGCAGGAAGC AGGAACAACTTTCTCGGCAGAAGAACCTGAGTTTCTTCTCCGTGTCAGCTGGGGGGTTCG CCTGTTTCAGCTTGCTGGGCTTTTGCCTTGAAAGAGACTGTCGAGAACTCGAAGGAGAGC GAACTTTTTGAGGAAGTGAACAGACATCTGAGTCGGTCCGTAAAACTCACAACATGTCCT GCGCTGCCTGTCCTCTCTCTCCTGGGGAGTGACAAACGTCCGGGGAAGCACGTTGTAGCT TCATCAAAAGAAAACAGAGACAGACACTCGGCTGCATGCGCGGCTGTCCCTCGTTCTCTC TGTCAGTTCTCAGTGTAACTCTGCATTTCTCTCGCTCTCACTTTCTCGCGTTCCCCTCTC TTCCGCTTCTCTCGTTCTCTCCTCCCTCCCTCGTTCTATCCCTCTCTCGTTTTCTGCATC TCCCTTTCTCCTTTCCTCCGTATTTCTCCTTGTTCTCTCCCTTCTGCTCTCTCTCGCTCT CCTCGGTGGACTGTTTCTGCACTTTCCCTCGGTCCAGAAGGTCTCCAGCCTGTGCAGCGG TCGCGACAGGCCGACCTCCCTTCGGCTGCCTGCAGCGACGCAGGTTGAAGAGGACGCAGT CGAGAGGAGGAACAGCGGGGATTCACACAAGCAGGCACAAGCGAGAAACAGCAGCAGCCT GTAGAAGCAACACGATGAAGAGAGCCAGAAAAAGGCGGAACGGCAAGAACCAGCGCCTGC TTAACCTTACACACACTCGCAGCCTCGCAACTTCTCCTTGGCTC
  • Download Fasta

  • Fasta :-

    MANHKETEPPHAPEAAERPKAKKDAAHEDEEPKKTIPLDDADINILKSYGLSPYAFAIKR LDTDIKSLTEKITKLCGVRESDTGLCQPSQWDLAADKQLMQEQPLQVARCTKIIYPGGQT RGGENGENGESGGAGTTAPPPFGGDDEEPKYIINVKQIAKFVVGLGEKVAAMDIEEGMRV GVDRNKYKIQIPLPPKIDPTVTMMTVEEKPDVTYNDVGGAKEQLEKLREVLELPLLHPER FLSLGIDPPKGVLLYGPPGTGKTLTARAVANRTDACFICVIGSELVQKYVGEGARMVREL FQMARSRRACILFIDEVDAIGGSRGGEGEGNAHGDHEVQRTMLEIVNQLDGFEARGNIKV LMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTHIFKIHAKTLSVDRNIRYELLARLC PNSTGADIRSVCTEAGILAIRARKKSISEKNFIDAINRVIKGYKKFSATAKYMVYN

  • title: ATP binding site
  • coordinates: P257,P258,G259,T260,G261,K262,T263,L264,D315,N365
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_277500448 SKKSISEKNF0.996unspTGME49_277500448 SKKSISEKNF0.996unspTGME49_277500448 SKKSISEKNF0.996unspTGME49_277500151 YEEPKYIINV0.99unspTGME49_277500446 SARKKSISEK0.995unsp

TGME49_077500      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India