TGME49_285670 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
TGME49_285670OTHER0.9999900.0000010.000009
No Results

  • Fasta :-

    >TGME49_285670 MASAVASFNAGDFVHLDWTLATCCERGQWITFGIVLAWLAAAVILWHCEVWGYSVLLPLK MLTVFFHEFGHATATWLTCGRVHGIEVHTNEGGVTKTTGGSQCVILPAGYLGSCVWGMFF LLMASLNIWTLRVGAGILCFAMLVVLVFFARNCTLRLVCLFFLALVVGLWVWTEMEKLVW PLRVILLGIGVMNGVYSLWDIWDDTIRRKVRESDAYKCADLTHCSSRLCGVIWAAVAVAF MAASIYLLFVVKEVGDDYFE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_285670.fa Sequence name : TGME49_285670 Sequence length : 260 VALUES OF COMPUTED PARAMETERS Coef20 : 4.128 CoefTot : 0.404 ChDiff : -3 ZoneTo : 11 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.565 2.841 0.577 0.931 MesoH : 1.400 1.795 0.238 0.609 MuHd_075 : 13.785 9.157 3.017 2.143 MuHd_095 : 6.871 7.073 1.242 1.005 MuHd_100 : 7.091 4.633 1.454 0.598 MuHd_105 : 8.215 0.919 2.521 1.538 Hmax_075 : 10.267 12.483 -0.090 4.842 Hmax_095 : 10.063 9.012 0.498 3.657 Hmax_100 : 9.900 8.100 0.302 3.630 Hmax_105 : 14.800 8.600 0.717 4.670 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9780 0.0220 DFMC : 0.9633 0.0367
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 260 TGME49_285670 MASAVASFNAGDFVHLDWTLATCCERGQWITFGIVLAWLAAAVILWHCEVWGYSVLLPLKMLTVFFHEFGHATATWLTCG 80 RVHGIEVHTNEGGVTKTTGGSQCVILPAGYLGSCVWGMFFLLMASLNIWTLRVGAGILCFAMLVVLVFFARNCTLRLVCL 160 FFLALVVGLWVWTEMEKLVWPLRVILLGIGVMNGVYSLWDIWDDTIRRKVRESDAYKCADLTHCSSRLCGVIWAAVAVAF 240 MAASIYLLFVVKEVGDDYFE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_285670 26 LATCCER|GQ 0.080 . TGME49_285670 60 SVLLPLK|ML 0.060 . TGME49_285670 81 TWLTCGR|VH 0.096 . TGME49_285670 96 NEGGVTK|TT 0.082 . TGME49_285670 132 LNIWTLR|VG 0.087 . TGME49_285670 151 VLVFFAR|NC 0.081 . TGME49_285670 156 ARNCTLR|LV 0.125 . TGME49_285670 177 VWTEMEK|LV 0.064 . TGME49_285670 183 KLVWPLR|VI 0.085 . TGME49_285670 207 IWDDTIR|RK 0.067 . TGME49_285670 208 WDDTIRR|KV 0.147 . TGME49_285670 209 DDTIRRK|VR 0.062 . TGME49_285670 211 TIRRKVR|ES 0.427 . TGME49_285670 217 RESDAYK|CA 0.077 . TGME49_285670 227 LTHCSSR|LC 0.122 . TGME49_285670 252 YLLFVVK|EV 0.077 . ____________________________^_________________

  • Fasta :-

    >TGME49_285670 TTTTTCTGAAGGTTTGCCAAGGCGGAGAGCGAAACGAAATCGCCTACGTTTTTCCAGAAA ATTCAAAGTTGTCACAGACGTTTCTCACCTCGCGAGACTCCCGTTGATTGGGACCGAGTC CCCGTCCGCGTCGGGAGATTTCCAGAGTTGACCCGCTGCGTTCGCGTCTGGCGTACTTTT ACCATTTGAAAACATACGAGGAAGGCTACGCGCCAGTCGGCGTCTTCAGGCCGAAGTCGA GGTATCTCTCGCCGCACAAATTCGGAGAAAACTTTTGGACGGTCCCGGGCTTCGGAAAAG CGGAAGCGAAAAAGTTGTGCGTTCGATCCGGTTGAGCGAACCCCGTGTGAGGCCGGAAAT CGCAATTTTTTCGTCTAAGTGTGGACGGACTGAACTCTGAGTCCTTTCCTTCCGTTTGTC ACTCGTTTTCACCTTTTTCCTTGGAAAGAGACACCACGTTGGTGGACTCCTGTCTCTTCG TCCCAGAGGAGACTTCGAGAACAGACGCTCCAGCGCTTGGTTGACGAGAGTCTCTCCCTC GGAGACGCCGTCGTCTGGTCAGTTCCGTTTCGTCTGCTTCATGGAAAAGTCTCCTGGCCC TTCTGTTTCGAGCCAAGCAACGTTCGGGACGAGACATTGACCTGCGTTTCCTCAGGCGCT TTCTGCCTGGCGCTCCTCGCGAACAGAGTGCCTCGAAGAGGTCTCGATCTTTCTCGACTG GTGGGGTGGCTTGCAACTTCGTCTGCCAATATTTGGTCGTTCTTCACGGATTCTCCTCTA CTTTCTTCGTTCTTTCCACGCATGAACCTCGCAGTTCACCGCGGAGGATGTGTCTTTTTC GCGAAACTCACTTCGGAACGGTTCGTTTGTTGCGCGGCCAGGCAAACGCGTTTCCCGAGA CGCTCGCTTTATCTCTTGTTTCTCGCTCGCGTCGGCTTCGTAGCCTTCCAAAGGAACTCT CAGTGAGGACATGATTCCTAAACTGCAGTCAACAAAAGCCTCCCCGCCTCGCTGCGTCCC TTCAACAAAGTCACCTCCGACGCCCGTCGACTGTCGCAGCGCGCTTTGTCTTCCGCTCCG TGACGTTTTTTCACTTCCAAAGCGTTGACGTCCAGCCTGCGTTGCGCCTTCTGCCCCTCG AAGGTCGAGCGCCCAGCTGGACGGCCTCTCCGCGGGGGATTCGACGCAGAGAAGCAAGTT GTCCCCAAGTGACATTCTACGCTTCGCCCGCGTACGGTTTTGTGTCCGCTCTTCAAGGTC TTCCGCTCGCACACCGCTCGAAAATGGCCTCTGCAGTGGCATCGTTCAACGCAGGCGACT TCGTCCATCTCGACTGGACGCTGGCAACATGCTGCGAAAGAGGGCAGTGGATCACCTTCG GGATCGTTCTCGCCTGGCTCGCGGCCGCCGTCATTCTCTGGCACTGCGAAGTCTGGGGGT ACAGCGTCTTGCTGCCGCTCAAGATGTTGACCGTCTTCTTCCACGAGTTCGGCCATGCCA CTGCAACCTGGCTCACATGCGGCAGAGTCCACGGCATCGAGGTGCACACGAACGAGGGAG GAGTGACCAAGACAACTGGCGGGTCGCAGTGCGTGATTCTGCCGGCCGGGTATTTGGGGT CTTGTGTCTGGGGCATGTTTTTCCTCCTGATGGCGTCGCTTAACATCTGGACTCTGCGCG TCGGAGCAGGAATCCTCTGTTTCGCGATGCTGGTGGTTCTCGTCTTTTTTGCGCGCAACT GCACGTTGCGGCTCGTCTGCCTGTTCTTCCTCGCCCTCGTCGTCGGCTTGTGGGTGTGGA CTGAAATGGAGAAACTCGTTTGGCCGCTGCGAGTCATTCTCCTGGGGATCGGCGTGATGA ACGGCGTGTACAGTTTGTGGGACATCTGGGACGACACCATTCGCAGAAAAGTCCGTGAAA GCGACGCGTACAAGTGCGCTGACCTCACGCACTGCAGCAGCAGACTCTGCGGCGTCATCT GGGCTGCCGTCGCTGTGGCGTTCATGGCCGCCTCGATCTACCTCCTCTTTGTCGTGAAGG AAGTCGGCGACGACTACTTCGAGTGAGACGGAGCTGCTGGCTGTCAGCGGTGTGGCGGGA GCGTCGTCCTCACGTTCCTCGACGTTTGCAGATCTACAGGGACTTTGGAAGAGTCGATAC GCCGTTCTCTCAGACCGTCAGGCTGAGACGAACGCGTTGGCGCTTCGTGTCAGTATCTCG ACATGTCATTTTTCAACTCCGTCGGTCGCTCTCTCTCGCTCTCAGGTTGCAGTTCTCTTG GTGCGTCTGAGGAGTCGAAGCCACGTTTCCCGATACATTAAGCATGTTTTCGCAATATTT ACTTGAGAAGAGAAACGGATCAATGGACTCTGCAAATTTGAAGAACATTTTTTTTTGTGA TTCAGGAAAACATGGCGAAATAGGGGGGAACCTGACCCGAGTCGGCTGCTGTGAAAAACA AGAGTGCAGTGACAGCCGCCGCGAGCGCCAGACTGTAGAGGGGTGCAGGGAAAGGTAAAA AATTCAGAACGTTCTTGCCAGCCAAAGGGAGAGAGAAACCTGGCGAGACCAGATAGAACG TCTGTGAATGATATATATAGAGAGAGAGAGCAACAAAGCAAAAGGACTCATCACTCGTTT AAGGGAGGGGTACTTGAGAGCCGCGCGTCAGTGCGCCGAAGAAACGAATGCCATTGGGTT TTAGAGAGAGAGTCGAGCCACGCAGTCTCAATCGATTTTCCAGGTGTTGAAGCCCCGTGG CGAGAAGGGGTCGCTGTGATCCGATGCTCAAACGCGTTTCCATCGAGGATCCGGAGACAC CGAGGGCATCTTTCTGCGCAACAGAGAACGGATACAGACGCAGAAAGAGTTCTGGAAGAG AAACATTCAAGTTTTCGAGGTACCTCGTGGATGCGTTTCTTGGACGCGTCCACTCAAACA CGCTGACCCCAGAGTTTAGCAGACCTCGGGGTACGGGTGTCTCCGGGAGATCCTCGTTTT TGCGGGGCAGATTCTTTTCCATTTGTGTTTGTTCAGTGGGACAAGAGAAAAGCCAGTGCC CGGGCGCAGGCGAGGAGACAGAGCAGCCCTGCCTTTCGTTCCTGCTTGTGTGTTGGAATA ATCTCCTTGTTTGTCTCCGTTGTGCGTCTGTGTTTATTTGGTCCGTTTCTGCGAATTGTC AGCAGACAAGAGGTAACATGGACAGTCTCTCCTCAATCCTCTTTCGCAGAACTGCAAGCC GTGCTGCCGGAGACGGCCGCGACCGTCCAAGTTCGGTGGCACTTTCCATGAACATCGTGT AATAAAAAAGTGCATCCAGTAATATCCAATGTCGAGTTGAAAAACAAGCGCTGGTAACGG TCTTCAAC
  • Download Fasta

  • Fasta :-

    MASAVASFNAGDFVHLDWTLATCCERGQWITFGIVLAWLAAAVILWHCEVWGYSVLLPLK MLTVFFHEFGHATATWLTCGRVHGIEVHTNEGGVTKTTGGSQCVILPAGYLGSCVWGMFF LLMASLNIWTLRVGAGILCFAMLVVLVFFARNCTLRLVCLFFLALVVGLWVWTEMEKLVW PLRVILLGIGVMNGVYSLWDIWDDTIRRKVRESDAYKCADLTHCSSRLCGVIWAAVAVAF MAASIYLLFVVKEVGDDYFE

    No Results
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TGME49_085670      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India