TGME49_300310 | 26S proteasome regulatory subunit, S6a family AAA ATpase

_IDPredictionOTHERSPmTPCS_Position
TGME49_300310OTHER0.9999970.0000010.000002
No Results

  • Fasta :-

    >TGME49_300310 MDSAAVWSDESEDVATAELAGLSASDLRMRTSMIDSEVRILKSEVNRLRFELHSMQERIK DNREKIRLNRQLPYLVANVVELFDSEDAEEEEEDGAVGDIDAQRKGKCVVIKTSTRQTIF LPVIGLVDHTLLKPGDLVGVNKDSYLVLDKLPAEYDSRVRAMEVDERPQEEYNDVGGLDK QIQELIEAVVLPMTHKERFEKIGIRPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG PQLVQMFIGDGAKMVRDAFELAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLEL LNQLDGFSSDDRIKVIAATNRPDVLDPALLRSGRLDRKIELPHPNEEARERILQIHARKM NVNKEDVNFRELARATDDFNGAQLKAVCVEAGMVALRRGASELCHEDFVEGVAQVQAKKK SSLNYFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_300310.fa Sequence name : TGME49_300310 Sequence length : 427 VALUES OF COMPUTED PARAMETERS Coef20 : 3.814 CoefTot : 0.000 ChDiff : -14 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.182 -0.026 0.526 MesoH : -0.671 0.330 -0.398 0.201 MuHd_075 : 21.458 14.023 5.319 3.331 MuHd_095 : 24.839 3.526 4.845 1.804 MuHd_100 : 24.423 7.110 4.449 2.853 MuHd_105 : 25.865 10.519 4.771 3.779 Hmax_075 : 4.200 12.133 -0.385 3.897 Hmax_095 : 1.800 2.300 -1.707 2.050 Hmax_100 : 1.800 2.300 -1.707 2.050 Hmax_105 : 3.588 4.500 -1.894 2.870 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9434 0.0566 DFMC : 0.9056 0.0944
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 427 TGME49_300310 MDSAAVWSDESEDVATAELAGLSASDLRMRTSMIDSEVRILKSEVNRLRFELHSMQERIKDNREKIRLNRQLPYLVANVV 80 ELFDSEDAEEEEEDGAVGDIDAQRKGKCVVIKTSTRQTIFLPVIGLVDHTLLKPGDLVGVNKDSYLVLDKLPAEYDSRVR 160 AMEVDERPQEEYNDVGGLDKQIQELIEAVVLPMTHKERFEKIGIRPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG 240 PQLVQMFIGDGAKMVRDAFELAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSSDDRIKVIAATN 320 RPDVLDPALLRSGRLDRKIELPHPNEEARERILQIHARKMNVNKEDVNFRELARATDDFNGAQLKAVCVEAGMVALRRGA 400 SELCHEDFVEGVAQVQAKKKSSLNYFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_300310 28 LSASDLR|MR 0.088 . TGME49_300310 30 ASDLRMR|TS 0.071 . TGME49_300310 39 MIDSEVR|IL 0.074 . TGME49_300310 42 SEVRILK|SE 0.146 . TGME49_300310 47 LKSEVNR|LR 0.095 . TGME49_300310 49 SEVNRLR|FE 0.086 . TGME49_300310 58 LHSMQER|IK 0.105 . TGME49_300310 60 SMQERIK|DN 0.075 . TGME49_300310 63 ERIKDNR|EK 0.090 . TGME49_300310 65 IKDNREK|IR 0.056 . TGME49_300310 67 DNREKIR|LN 0.099 . TGME49_300310 70 EKIRLNR|QL 0.185 . TGME49_300310 104 GDIDAQR|KG 0.073 . TGME49_300310 105 DIDAQRK|GK 0.098 . TGME49_300310 107 DAQRKGK|CV 0.243 . TGME49_300310 112 GKCVVIK|TS 0.076 . TGME49_300310 116 VIKTSTR|QT 0.079 . TGME49_300310 133 VDHTLLK|PG 0.061 . TGME49_300310 142 DLVGVNK|DS 0.073 . TGME49_300310 150 SYLVLDK|LP 0.052 . TGME49_300310 158 PAEYDSR|VR 0.068 . TGME49_300310 160 EYDSRVR|AM 0.077 . TGME49_300310 167 AMEVDER|PQ 0.084 . TGME49_300310 180 DVGGLDK|QI 0.063 . TGME49_300310 196 VLPMTHK|ER 0.059 . TGME49_300310 198 PMTHKER|FE 0.100 . TGME49_300310 201 HKERFEK|IG 0.115 . TGME49_300310 205 FEKIGIR|PP 0.084 . TGME49_300310 208 IGIRPPK|GV 0.252 . TGME49_300310 220 GPPGTGK|TL 0.059 . TGME49_300310 225 GKTLLAR|AC 0.099 . TGME49_300310 232 ACAAQTK|AT 0.076 . TGME49_300310 237 TKATFLK|LA 0.128 . TGME49_300310 253 FIGDGAK|MV 0.083 . TGME49_300310 256 DGAKMVR|DA 0.126 . TGME49_300310 263 DAFELAK|EK 0.065 . TGME49_300310 265 FELAKEK|AP 0.058 . TGME49_300310 281 LDAIGTK|RF 0.062 . TGME49_300310 282 DAIGTKR|FD 0.174 . TGME49_300310 291 SELSGDR|EV 0.080 . TGME49_300310 295 GDREVQR|TM 0.096 . TGME49_300310 312 GFSSDDR|IK 0.081 . TGME49_300310 314 SSDDRIK|VI 0.060 . TGME49_300310 321 VIAATNR|PD 0.072 . TGME49_300310 331 LDPALLR|SG 0.083 . TGME49_300310 334 ALLRSGR|LD 0.220 . TGME49_300310 337 RSGRLDR|KI 0.247 . TGME49_300310 338 SGRLDRK|IE 0.071 . TGME49_300310 349 HPNEEAR|ER 0.118 . TGME49_300310 351 NEEARER|IL 0.088 . TGME49_300310 358 ILQIHAR|KM 0.105 . TGME49_300310 359 LQIHARK|MN 0.090 . TGME49_300310 364 RKMNVNK|ED 0.063 . TGME49_300310 370 KEDVNFR|EL 0.096 . TGME49_300310 374 NFRELAR|AT 0.110 . TGME49_300310 385 FNGAQLK|AV 0.088 . TGME49_300310 397 AGMVALR|RG 0.085 . TGME49_300310 398 GMVALRR|GA 0.206 . TGME49_300310 418 VAQVQAK|KK 0.075 . TGME49_300310 419 AQVQAKK|KS 0.092 . TGME49_300310 420 QVQAKKK|SS 0.172 . ____________________________^_________________

  • Fasta :-

    >TGME49_300310 TAGCTTCGAAGAAGATACGAGGGCCGCTGCTCCTCGCAGTCTCTCTGGGACCTGCAGTGA TTTGCTGTCTTCACTGAAAGAAAACTTCTTCTCTGTTCTTTCGTAAAAGAAACAGTCTTG CATCCCCTCTTTCTCTCTTTCTTTTGTTCTCCCTCTCTTGTTTGTTCTTGTCCTGTTCTG CCTGTCGCTGTGCTTCGCGTTCTCCTGCTTGTTCTCGCTGGTGCGTTTCCTCTCTGTCTT CGCTCTGTGTCTCTTGTGCGCTTGTCTCCTGCGCGGCTTTCTTCTCGGCGAGGGAACTCC AGGTGTCTTGGCGTCGCGAGAAAGACGCGTTCGTTTTCGCTGCGTTTCTTCTCTTTTGTC GGCCAAAGAGCACTGTGGAGGCGACGGGGACGGGGAGTCCGCACACCCTGAGGAGTTCGT ACGAAGAGGCTTTTTGGACCTGTGTTCCCCCCGCGATCCGTTCTTGAGTCGAGACTTGCG TTCGACCGGCGGTTCGATTCCTTTTCGTGCACTCTCTCAGCTCCAGTCCTGGCCTCCGCC TCACGACAAAGCGTCGTCGAGAAGCCGGCTGTCTGCCTGCTGCATGCGCCTATACACCAC ACCGCGTCCGGAGGAGTGACTACACAGGTGTGTCTGCGCGTCCTCTTTTGCGGCTTTTCG CTGTCGCGTTAGCGCATGTCCGGCGAGAGCCTAGCCGCCGAAAGGCGAGTTCTTTTCTCT TTTCTTGCTTCGCTTGAAACCAGGCGGCATTCCACGCTTCCCTTTCCTCCGGGGGCGACT TCCAGTGCGGTTCTCTCCACACCCGGCGACGCTCGCGCCGCTGCCTCGCTTGTCCGCAGA AGGCGCAGGAAAAGAAGAGGAGTGAAGCGAAAAGACGAAAAGAGGAGAAGAAGCGACGAA GAGAACGAGCGAAGAAACGCCGACCTGTGCAGAGCGAGGAACGCGCCGCTTGGCTCGGAG GCAGCGCCTTTTTTCCGACTCTCGACCGCCTCTCCACTGGTGCCGCCGGTTTGTCGATCC TCGATAGGTTTTTCGTTCTCGTTTTCCTCTTTTTTACGAACCGTGAACGCAGACGCCACA CTCAGCACTTCCCGTCTTGTTGGCCAGGTCGACGCATGGTCCTCGCGCCCATCTCGCCGT GAGATTCCACTGTCCGATTGCCTTTCCTTCCCTCTAAAGACAGAAGAGTTTGGACTGGCT CTGCGCGTCTGAGAAATCCGACGTCTTCGCTTCTCTCCTTCCATTCTCCGTCCTCTGCGT CGCCTTGCTCTTCTCCGTCTCCCTGGTCTCGCTCTCTTCCTCTCTCTTTTCTCTCTTCTC TCTCTTTTTTCTCTCTCTTTTTTCTCTCTCTTCTACCTCTCGTTGTGCGAGCGCGCTCGC TTCTTCTCCCCTCCTGCCTTTTCTTCCTTTGTGCTGCTTCTCTGTCTCTTCCGCTGCTCG TCGGAGGCCTCCGAAATCCTGACGCGAACGCCTCGGCCGCCGGTCTTCCTTCGCAGACGA GATGGACAGCGCAGCAGTATGGAGCGACGAGAGCGAGGACGTCGCGACTGCCGAGTTGGC CGGACTCAGTGCCTCGGATCTCCGCATGCGAACGTCGATGATCGACAGCGAAGTTCGCAT CCTCAAGAGTGAAGTGAATCGCCTTCGTTTCGAGCTCCACTCCATGCAGGAGCGTATCAA GGACAACCGGGAGAAGATTCGCCTTAACCGCCAGTTGCCGTATCTGGTTGCGAACGTTGT GGAGCTTTTCGACAGCGAAGATGCAGAGGAGGAGGAAGAGGATGGTGCTGTCGGAGACAT CGACGCCCAAAGAAAAGGCAAATGCGTCGTGATCAAAACTTCTACTCGCCAGACGATTTT CCTCCCCGTGATTGGCCTGGTCGACCACACACTGCTCAAGCCGGGCGACTTGGTGGGTGT GAACAAAGACAGCTACCTCGTCCTCGACAAACTCCCTGCAGAGTACGACAGTCGTGTGCG TGCGATGGAAGTCGACGAACGACCCCAAGAAGAGTACAACGACGTCGGCGGCTTAGACAA GCAAATTCAGGAGTTGATCGAAGCAGTGGTGCTGCCGATGACGCACAAGGAACGATTTGA AAAGATTGGCATTCGACCTCCGAAGGGTGTTCTCATGTATGGTCCTCCGGGAACTGGGAA GACGCTTTTAGCTCGTGCCTGCGCTGCACAGACGAAAGCCACGTTCCTCAAGCTCGCAGG GCCTCAGCTGGTGCAGATGTTCATTGGAGACGGTGCCAAGATGGTTCGCGACGCGTTCGA ACTTGCCAAGGAAAAGGCGCCGGCCATCATCTTCATCGATGAATTGGATGCGATTGGCAC GAAGCGTTTTGACAGCGAACTTTCAGGCGACCGTGAAGTGCAACGCACCATGCTTGAACT CCTAAACCAGCTGGATGGCTTTAGCAGCGACGATCGCATTAAAGTGATTGCGGCGACGAA CAGACCGGATGTGCTAGATCCAGCGCTCCTCCGTTCAGGACGCCTCGACCGAAAAATTGA GTTGCCGCATCCAAACGAAGAAGCTCGAGAAAGAATTCTCCAAATCCACGCAAGAAAAAT GAACGTCAACAAAGAAGACGTGAACTTCCGCGAATTAGCTCGCGCGACAGATGACTTCAA TGGAGCTCAGCTGAAGGCGGTCTGCGTCGAGGCAGGGATGGTGGCTTTGCGTCGAGGAGC CTCTGAGCTTTGCCATGAAGATTTCGTGGAAGGCGTCGCGCAAGTTCAAGCGAAAAAGAA GTCTTCTCTCAACTACTTCACTTAGAAAAGGAACGCGCGGAAATCGGCCGTTCCCCGTCT CGCCACAGACGCTGAAATCCTCTTCACAGGCCACCGACCTTCCTCAACAGACGCTGCTCT CACATGCACTTGGAAGATTCCCTGCATGTATGTTTGAGAGCTCTTCCGCTGTGTTCGGAG TCTGCGCGGGAGGTTTAGGTGGATGTTCAATCTCTCGGAACTCCGGCGGCCAAGTGCGTT TCCCAGTTCCGTTTCTTGAGGAAAGAGGAATTCTCGGTGGCGCCGTCGCTCTCTTCACGC TGTGTGTCTCCGGACTGGTGTTCCCCGTGAGGGATAAGTTCATCTGCATCTTGCATGTGG TGCCTCAGTCTTTTGCGCCTTTCTTTCAGTGAGAGAAATTCAAAAGAGAAACAGATTCGG AAACCAACTTTGGAGACGCTCGCGCCCGTGCCCTGCAAATTG
  • Download Fasta

  • Fasta :-

    MDSAAVWSDESEDVATAELAGLSASDLRMRTSMIDSEVRILKSEVNRLRFELHSMQERIK DNREKIRLNRQLPYLVANVVELFDSEDAEEEEEDGAVGDIDAQRKGKCVVIKTSTRQTIF LPVIGLVDHTLLKPGDLVGVNKDSYLVLDKLPAEYDSRVRAMEVDERPQEEYNDVGGLDK QIQELIEAVVLPMTHKERFEKIGIRPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAG PQLVQMFIGDGAKMVRDAFELAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLEL LNQLDGFSSDDRIKVIAATNRPDVLDPALLRSGRLDRKIELPHPNEEARERILQIHARKM NVNKEDVNFRELARATDDFNGAQLKAVCVEAGMVALRRGASELCHEDFVEGVAQVQAKKK SSLNYFT

  • title: ATP binding site
  • coordinates: P215,P216,G217,T218,G219,K220,T221,L222,D273,N320
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_30031032 SRMRTSMIDS0.997unspTGME49_300310285 SKRFDSELSG0.994unsp

TGME49_100310      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India