Tbg.972.2.1890 | cysteine peptidase, Clan CA, family C51, putative

  • Computed_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:  GO:0003674      

  • Curated_GO_Functions:  molecular_function      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg.972.2.1890OTHER0.8986260.0973120.004062
No Results

  • Fasta :-

    >Tbg.972.2.1890 MAARKAGTARPLLQREGEARNFDSYKLYAGASFAVGVVIILCLMKVPRAENSKDTVSTNT GSLSVGCQQNCSAPFGNVLGIYNGVPAMSNCNSDSCTAELWNTVKVEDIRIPAGRVDPHA VPPIYGMQWQCVEYARRYWMLRGTPQPATFGSVDGAADIWDLKDIQLLNGQKRKPLLKYH NGNATSANSKPRVGDLLIYPRQPNGFPYGHVAVVAGVTGDRMFVAEQNWENAAWPGPYHN YSRVLNLSCNPNGTACTVREKDNVTVQGWVRYE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/484 Sequence name : 484 Sequence length : 273 VALUES OF COMPUTED PARAMETERS Coef20 : 4.204 CoefTot : 0.442 ChDiff : 6 ZoneTo : 15 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.082 2.400 0.519 0.811 MesoH : -0.048 0.385 -0.181 0.228 MuHd_075 : 40.145 18.922 10.156 9.734 MuHd_095 : 19.422 14.034 3.783 4.940 MuHd_100 : 24.150 17.827 6.136 6.178 MuHd_105 : 21.965 18.362 6.720 5.877 Hmax_075 : 12.000 9.700 2.017 4.350 Hmax_095 : -3.325 4.638 -2.942 2.030 Hmax_100 : -2.100 6.100 -0.898 1.840 Hmax_105 : 2.567 11.083 -0.461 3.873 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8321 0.1679 DFMC : 0.8914 0.1086
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 273 Tbg.972.2.1890 MAARKAGTARPLLQREGEARNFDSYKLYAGASFAVGVVIILCLMKVPRAENSKDTVSTNTGSLSVGCQQNCSAPFGNVLG 80 IYNGVPAMSNCNSDSCTAELWNTVKVEDIRIPAGRVDPHAVPPIYGMQWQCVEYARRYWMLRGTPQPATFGSVDGAADIW 160 DLKDIQLLNGQKRKPLLKYHNGNATSANSKPRVGDLLIYPRQPNGFPYGHVAVVAGVTGDRMFVAEQNWENAAWPGPYHN 240 YSRVLNLSCNPNGTACTVREKDNVTVQGWVRYE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg.972.2.1890 4 ---MAAR|KA 0.172 . Tbg.972.2.1890 5 --MAARK|AG 0.074 . Tbg.972.2.1890 10 RKAGTAR|PL 0.128 . Tbg.972.2.1890 15 ARPLLQR|EG 0.084 . Tbg.972.2.1890 20 QREGEAR|NF 0.101 . Tbg.972.2.1890 26 RNFDSYK|LY 0.070 . Tbg.972.2.1890 45 IILCLMK|VP 0.054 . Tbg.972.2.1890 48 CLMKVPR|AE 0.094 . Tbg.972.2.1890 53 PRAENSK|DT 0.075 . Tbg.972.2.1890 105 ELWNTVK|VE 0.060 . Tbg.972.2.1890 110 VKVEDIR|IP 0.069 . Tbg.972.2.1890 115 IRIPAGR|VD 0.098 . Tbg.972.2.1890 136 QCVEYAR|RY 0.088 . Tbg.972.2.1890 137 CVEYARR|YW 0.115 . Tbg.972.2.1890 142 RRYWMLR|GT 0.102 . Tbg.972.2.1890 163 ADIWDLK|DI 0.064 . Tbg.972.2.1890 172 QLLNGQK|RK 0.050 . Tbg.972.2.1890 173 LLNGQKR|KP 0.148 . Tbg.972.2.1890 174 LNGQKRK|PL 0.099 . Tbg.972.2.1890 178 KRKPLLK|YH 0.068 . Tbg.972.2.1890 190 ATSANSK|PR 0.060 . Tbg.972.2.1890 192 SANSKPR|VG 0.094 . Tbg.972.2.1890 201 DLLIYPR|QP 0.072 . Tbg.972.2.1890 221 AGVTGDR|MF 0.085 . Tbg.972.2.1890 243 PYHNYSR|VL 0.074 . Tbg.972.2.1890 259 GTACTVR|EK 0.115 . Tbg.972.2.1890 261 ACTVREK|DN 0.072 . Tbg.972.2.1890 271 TVQGWVR|YE 0.091 . ____________________________^_________________

  • Fasta :-

    >Tbg.972.2.1890 ATGGCGGCGAGGAAAGCAGGCACCGCCAGACCTCTTTTACAACGTGAGGGTGAGGCAAGA AACTTCGACTCATATAAGCTTTACGCAGGCGCCTCATTTGCTGTGGGAGTTGTCATCATT CTCTGCCTTATGAAGGTCCCTCGCGCGGAAAATAGTAAAGATACGGTGAGTACAAACACT GGGAGTCTTTCAGTGGGCTGCCAACAGAATTGCTCGGCCCCTTTTGGTAATGTGTTGGGA ATTTACAACGGAGTTCCAGCTATGAGCAATTGCAACAGTGATAGTTGCACAGCAGAACTT TGGAACACTGTCAAGGTGGAAGACATACGGATACCGGCTGGTCGCGTGGACCCTCATGCG GTTCCACCCATATATGGTATGCAATGGCAATGCGTGGAATATGCCCGACGGTATTGGATG CTTCGAGGTACACCACAACCAGCCACTTTTGGTTCTGTAGATGGAGCAGCTGACATTTGG GATCTTAAAGATATTCAACTGCTCAATGGTCAAAAGCGGAAACCATTACTCAAATATCAT AACGGAAATGCAACATCTGCAAACTCTAAGCCGCGTGTGGGGGATTTGTTGATTTACCCA CGGCAACCCAATGGCTTTCCATACGGTCATGTTGCCGTTGTTGCGGGTGTGACAGGGGAT CGTATGTTTGTAGCGGAACAGAACTGGGAAAACGCAGCATGGCCAGGCCCGTATCATAAT TACTCGCGTGTGCTTAACTTGTCATGTAATCCCAATGGCACGGCATGTACCGTACGTGAA AAGGATAATGTCACAGTGCAGGGGTGGGTGCGGTATGAATAA
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  • Fasta :-

    MAARKAGTARPLLQREGEARNFDSYKLYAGASFAVGVVIILCLMKVPRAENSKDTVSTNT GSLSVGCQQNCSAPFGNVLGIYNGVPAMSNCNSDSCTAELWNTVKVEDIRIPAGRVDPHA VPPIYGMQWQCVEYARRYWMLRGTPQPATFGSVDGAADIWDLKDIQLLNGQKRKPLLKYH NGNATSANSKPRVGDLLIYPRQPNGFPYGHVAVVAGVTGDRMFVAEQNWENAAWPGPYHN YSRVLNLSCNPNGTACTVREKDNVTVQGWVRYE

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India