Tbg.972.2.1900 | cysteine peptidase, Clan CA, family C51, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0003674      

  • Curated_GO_Functions:  molecular_function      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg.972.2.1900OTHER0.9999560.0000130.000031
No Results

  • Fasta :-

    >Tbg.972.2.1900 MEREPAVTSKTNRLSSNEKDPHDVPETNDGAINGSFNNRKRGIKRLCSIAQAIFAWTFGV LVLLFISFIAFGVLYSGIRYPEGSGKVEKHCLNPVDAILGAHEGVFSYSNCGATENTTTY NNVTVAGTSYQSGLKWQCVEYARRYWMLRGTPQPATFGSVDGAADIWDLKDIQLLNGQKR KPLLKYHNGNATSANSKPRVGDLLIYPRQPNGFPCGHVAVVVGVTGDRMFVAEQNWENAA WPGPYHNYSRVLNLSCNPNGTACTVREKDNVTVQGWVRYE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/47 Sequence name : 47 Sequence length : 280 VALUES OF COMPUTED PARAMETERS Coef20 : 3.775 CoefTot : 0.000 ChDiff : 5 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.600 2.835 0.516 0.982 MesoH : 0.230 0.739 -0.139 0.385 MuHd_075 : 37.419 14.740 8.192 6.238 MuHd_095 : 22.548 6.959 5.236 2.534 MuHd_100 : 26.867 8.017 5.397 4.352 MuHd_105 : 24.479 8.507 4.224 5.223 Hmax_075 : -0.700 1.400 -2.963 0.933 Hmax_095 : -6.000 -3.150 -4.113 -0.880 Hmax_100 : 1.400 -1.200 -2.743 0.440 Hmax_105 : -4.025 1.500 -3.228 1.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9836 0.0164 DFMC : 0.9667 0.0333
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 280 Tbg.972.2.1900 MEREPAVTSKTNRLSSNEKDPHDVPETNDGAINGSFNNRKRGIKRLCSIAQAIFAWTFGVLVLLFISFIAFGVLYSGIRY 80 PEGSGKVEKHCLNPVDAILGAHEGVFSYSNCGATENTTTYNNVTVAGTSYQSGLKWQCVEYARRYWMLRGTPQPATFGSV 160 DGAADIWDLKDIQLLNGQKRKPLLKYHNGNATSANSKPRVGDLLIYPRQPNGFPCGHVAVVVGVTGDRMFVAEQNWENAA 240 WPGPYHNYSRVLNLSCNPNGTACTVREKDNVTVQGWVRYE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg.972.2.1900 3 ----MER|EP 0.069 . Tbg.972.2.1900 10 EPAVTSK|TN 0.068 . Tbg.972.2.1900 13 VTSKTNR|LS 0.106 . Tbg.972.2.1900 19 RLSSNEK|DP 0.089 . Tbg.972.2.1900 39 NGSFNNR|KR 0.108 . Tbg.972.2.1900 40 GSFNNRK|RG 0.083 . Tbg.972.2.1900 41 SFNNRKR|GI 0.242 . Tbg.972.2.1900 44 NRKRGIK|RL 0.118 . Tbg.972.2.1900 45 RKRGIKR|LC 0.276 . Tbg.972.2.1900 79 VLYSGIR|YP 0.088 . Tbg.972.2.1900 86 YPEGSGK|VE 0.064 . Tbg.972.2.1900 89 GSGKVEK|HC 0.067 . Tbg.972.2.1900 135 SYQSGLK|WQ 0.055 . Tbg.972.2.1900 143 QCVEYAR|RY 0.081 . Tbg.972.2.1900 144 CVEYARR|YW 0.110 . Tbg.972.2.1900 149 RRYWMLR|GT 0.102 . Tbg.972.2.1900 170 ADIWDLK|DI 0.064 . Tbg.972.2.1900 179 QLLNGQK|RK 0.050 . Tbg.972.2.1900 180 LLNGQKR|KP 0.148 . Tbg.972.2.1900 181 LNGQKRK|PL 0.099 . Tbg.972.2.1900 185 KRKPLLK|YH 0.068 . Tbg.972.2.1900 197 ATSANSK|PR 0.060 . Tbg.972.2.1900 199 SANSKPR|VG 0.094 . Tbg.972.2.1900 208 DLLIYPR|QP 0.073 . Tbg.972.2.1900 228 VGVTGDR|MF 0.080 . Tbg.972.2.1900 250 PYHNYSR|VL 0.074 . Tbg.972.2.1900 266 GTACTVR|EK 0.115 . Tbg.972.2.1900 268 ACTVREK|DN 0.072 . Tbg.972.2.1900 278 TVQGWVR|YE 0.091 . ____________________________^_________________

  • Fasta :-

    >Tbg.972.2.1900 ATGGAAAGAGAGCCAGCGGTAACATCGAAGACTAATCGACTTTCATCTAACGAAAAAGAT CCTCACGATGTCCCAGAAACCAATGATGGAGCCATTAATGGTTCTTTCAACAACCGGAAG CGTGGTATAAAACGCCTATGCTCAATTGCCCAGGCGATATTCGCTTGGACATTTGGCGTA CTCGTTCTTCTTTTTATTTCTTTCATTGCCTTTGGCGTGCTTTACTCTGGCATTCGCTAC CCCGAAGGCAGCGGCAAAGTGGAAAAACATTGCCTCAATCCAGTCGATGCTATTCTTGGC GCACATGAGGGCGTCTTCTCTTACAGCAACTGTGGTGCAACAGAGAATACCACTACGTAT AACAACGTCACAGTGGCTGGAACCAGTTACCAAAGCGGCTTAAAGTGGCAATGCGTGGAA TATGCCCGACGGTATTGGATGCTTCGAGGTACACCACAACCAGCCACTTTTGGTTCTGTA GATGGAGCAGCTGACATTTGGGATCTTAAAGATATTCAACTGCTCAATGGTCAAAAGCGG AAACCATTACTCAAATATCATAACGGAAATGCAACATCTGCAAACTCTAAGCCGCGTGTG GGGGATTTGTTGATTTACCCACGGCAACCCAATGGTTTTCCATGCGGTCATGTTGCCGTT GTTGTGGGTGTGACAGGGGATCGTATGTTTGTAGCGGAACAGAACTGGGAAAACGCAGCA TGGCCAGGCCCGTATCATAATTACTCGCGTGTGCTTAACTTGTCATGTAATCCCAATGGC ACGGCATGTACCGTACGTGAAAAGGATAATGTCACAGTGCAGGGGTGGGTGCGGTATGAA TAA
  • Download Fasta

  • Fasta :-

    MEREPAVTSKTNRLSSNEKDPHDVPETNDGAINGSFNNRKRGIKRLCSIAQAIFAWTFGV LVLLFISFIAFGVLYSGIRYPEGSGKVEKHCLNPVDAILGAHEGVFSYSNCGATENTTTY NNVTVAGTSYQSGLKWQCVEYARRYWMLRGTPQPATFGSVDGAADIWDLKDIQLLNGQKR KPLLKYHNGNATSANSKPRVGDLLIYPRQPNGFPCGHVAVVVGVTGDRMFVAEQNWENAA WPGPYHNYSRVLNLSCNPNGTACTVREKDNVTVQGWVRYE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg.972.2.190015 STNRLSSNEK0.995unspTbg.972.2.190016 SNRLSSNEKD0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India