Tbg.972.2.2270 | Mitochondrial-processing peptidase subunit alpha

_IDPredictionOTHERSPmTPCS_Position
Tbg.972.2.2270OTHER0.7062240.0013220.292453
No Results

  • Fasta :-

    >Tbg.972.2.2270 MLRHCIPRLGIAKTVIKDNYSLSTLTNGLRVLTCDDGNGVTGMGLFMLNGAKFESPDNAG AAAVFEALPLRDNQIYTSREISQALSGLGNAFKVTNNKEALSVILMLPRYHQRDGLELLN AMCLHPTRNEEEFRVAKEKTHERTLLYDRDATSVCFELVHEAGWNGKGLGHSLNPKKEEL DKLTLEKFTAFHSACTRPERTVLAATGVADHKSFAEEVEKLLRFNNADVAVQAMPQLQPG YYPYTGGSRLVHRTEAPESVNKFQEKSLSHVALFFQGVPINHPDYYNISVIQTLLGGGTS FSSGGPGKGMQTKLFREVLNREGFLHGLECITAWYSDGGLFGLYGTAPHQAVVSLLNVMI YQAASICQRVSPTHLEMAKNQLRSQLILLGEGREQLLSDMGFNLVVHNHIITATETMEGT RNITLDDLKRVCADMIKKPLTFTVYGDTTKMPSHESLEETVRKTYEKLN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/857 Sequence name : 857 Sequence length : 469 VALUES OF COMPUTED PARAMETERS Coef20 : 3.962 CoefTot : -0.379 ChDiff : -3 ZoneTo : 34 KR : 5 DE : 1 CleavSite : 40 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.341 1.712 0.216 0.551 MesoH : -0.048 0.365 -0.258 0.271 MuHd_075 : 61.594 36.467 17.639 13.231 MuHd_095 : 17.666 11.366 4.764 4.440 MuHd_100 : 25.000 21.548 8.053 5.249 MuHd_105 : 29.352 25.259 9.628 7.840 Hmax_075 : 17.733 20.067 5.559 6.195 Hmax_095 : 5.075 11.400 0.740 2.914 Hmax_100 : 6.900 17.000 2.265 4.410 Hmax_105 : 8.983 24.383 6.138 4.643 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5113 0.4887 DFMC : 0.5713 0.4287
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 469 Tbg.972.2.2270 MLRHCIPRLGIAKTVIKDNYSLSTLTNGLRVLTCDDGNGVTGMGLFMLNGAKFESPDNAGAAAVFEALPLRDNQIYTSRE 80 ISQALSGLGNAFKVTNNKEALSVILMLPRYHQRDGLELLNAMCLHPTRNEEEFRVAKEKTHERTLLYDRDATSVCFELVH 160 EAGWNGKGLGHSLNPKKEELDKLTLEKFTAFHSACTRPERTVLAATGVADHKSFAEEVEKLLRFNNADVAVQAMPQLQPG 240 YYPYTGGSRLVHRTEAPESVNKFQEKSLSHVALFFQGVPINHPDYYNISVIQTLLGGGTSFSSGGPGKGMQTKLFREVLN 320 REGFLHGLECITAWYSDGGLFGLYGTAPHQAVVSLLNVMIYQAASICQRVSPTHLEMAKNQLRSQLILLGEGREQLLSDM 400 GFNLVVHNHIITATETMEGTRNITLDDLKRVCADMIKKPLTFTVYGDTTKMPSHESLEETVRKTYEKLN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg.972.2.2270 3 ----MLR|HC 0.086 . Tbg.972.2.2270 8 LRHCIPR|LG 0.109 . Tbg.972.2.2270 13 PRLGIAK|TV 0.077 . Tbg.972.2.2270 17 IAKTVIK|DN 0.066 . Tbg.972.2.2270 30 TLTNGLR|VL 0.070 . Tbg.972.2.2270 52 FMLNGAK|FE 0.062 . Tbg.972.2.2270 71 FEALPLR|DN 0.090 . Tbg.972.2.2270 79 NQIYTSR|EI 0.130 . Tbg.972.2.2270 93 GLGNAFK|VT 0.069 . Tbg.972.2.2270 98 FKVTNNK|EA 0.065 . Tbg.972.2.2270 109 VILMLPR|YH 0.075 . Tbg.972.2.2270 113 LPRYHQR|DG 0.120 . Tbg.972.2.2270 128 MCLHPTR|NE 0.083 . Tbg.972.2.2270 134 RNEEEFR|VA 0.107 . Tbg.972.2.2270 137 EEFRVAK|EK 0.149 . Tbg.972.2.2270 139 FRVAKEK|TH 0.071 . Tbg.972.2.2270 143 KEKTHER|TL 0.079 . Tbg.972.2.2270 149 RTLLYDR|DA 0.094 . Tbg.972.2.2270 167 EAGWNGK|GL 0.089 . Tbg.972.2.2270 176 GHSLNPK|KE 0.065 . Tbg.972.2.2270 177 HSLNPKK|EE 0.099 . Tbg.972.2.2270 182 KKEELDK|LT 0.067 . Tbg.972.2.2270 187 DKLTLEK|FT 0.060 . Tbg.972.2.2270 197 FHSACTR|PE 0.100 . Tbg.972.2.2270 200 ACTRPER|TV 0.278 . Tbg.972.2.2270 212 TGVADHK|SF 0.075 . Tbg.972.2.2270 220 FAEEVEK|LL 0.058 . Tbg.972.2.2270 223 EVEKLLR|FN 0.079 . Tbg.972.2.2270 249 PYTGGSR|LV 0.086 . Tbg.972.2.2270 253 GSRLVHR|TE 0.089 . Tbg.972.2.2270 262 APESVNK|FQ 0.081 . Tbg.972.2.2270 266 VNKFQEK|SL 0.114 . Tbg.972.2.2270 308 SSGGPGK|GM 0.081 . Tbg.972.2.2270 313 GKGMQTK|LF 0.080 . Tbg.972.2.2270 316 MQTKLFR|EV 0.109 . Tbg.972.2.2270 321 FREVLNR|EG 0.080 . Tbg.972.2.2270 369 AASICQR|VS 0.100 . Tbg.972.2.2270 379 THLEMAK|NQ 0.059 . Tbg.972.2.2270 383 MAKNQLR|SQ 0.107 . Tbg.972.2.2270 393 ILLGEGR|EQ 0.070 . Tbg.972.2.2270 421 ETMEGTR|NI 0.067 . Tbg.972.2.2270 429 ITLDDLK|RV 0.061 . Tbg.972.2.2270 430 TLDDLKR|VC 0.140 . Tbg.972.2.2270 437 VCADMIK|KP 0.055 . Tbg.972.2.2270 438 CADMIKK|PL 0.077 . Tbg.972.2.2270 450 VYGDTTK|MP 0.061 . Tbg.972.2.2270 462 SLEETVR|KT 0.093 . Tbg.972.2.2270 463 LEETVRK|TY 0.092 . Tbg.972.2.2270 467 VRKTYEK|LN 0.067 . ____________________________^_________________

  • Fasta :-

    >Tbg.972.2.2270 ATGCTGCGTCATTGTATTCCACGTTTAGGCATAGCCAAAACAGTCATAAAAGACAATTAT TCACTTTCAACACTCACCAATGGTTTGCGTGTGCTCACATGCGATGATGGTAATGGAGTC ACGGGTATGGGACTCTTTATGCTGAATGGTGCCAAGTTTGAAAGTCCTGACAACGCTGGT GCTGCTGCGGTGTTTGAAGCCCTTCCGCTACGTGATAATCAAATTTATACTAGCCGTGAG ATCAGCCAAGCATTGAGTGGCCTCGGTAACGCTTTTAAGGTGACGAATAATAAAGAAGCT CTCTCCGTTATTCTCATGCTGCCGCGATACCACCAGCGTGATGGGTTGGAGCTTCTTAAC GCCATGTGCCTCCACCCCACGCGAAATGAGGAGGAGTTTCGCGTTGCAAAGGAGAAAACA CACGAGCGAACATTGTTATACGATCGTGACGCTACCAGTGTATGTTTTGAGCTTGTCCAT GAAGCGGGATGGAACGGTAAAGGTCTGGGACATTCCCTCAATCCAAAAAAGGAAGAACTC GACAAACTTACGTTGGAGAAATTTACGGCGTTCCACAGCGCCTGCACACGTCCAGAGCGT ACCGTACTAGCCGCGACGGGAGTGGCCGATCACAAGTCGTTTGCTGAAGAGGTGGAGAAG TTGTTGCGGTTCAACAATGCAGACGTAGCGGTGCAGGCAATGCCGCAGCTGCAACCCGGT TACTACCCCTATACGGGTGGCAGTCGTTTGGTCCACCGCACGGAGGCTCCAGAAAGCGTG AATAAGTTTCAAGAGAAGAGTTTGAGTCATGTGGCTCTCTTCTTTCAGGGCGTACCAATC AACCACCCGGATTATTACAACATAAGTGTGATTCAAACACTTCTTGGCGGGGGCACATCG TTTAGCTCCGGTGGTCCTGGTAAAGGGATGCAGACAAAGTTGTTCCGTGAGGTGCTTAAT AGGGAAGGTTTCTTACATGGGCTAGAATGCATCACTGCGTGGTATAGTGACGGCGGATTG TTTGGGCTTTATGGTACTGCCCCCCATCAGGCCGTTGTATCGCTTCTTAACGTAATGATA TATCAAGCGGCGTCTATTTGCCAACGGGTTAGTCCCACGCATTTAGAAATGGCGAAGAAT CAACTCCGCTCGCAGCTCATATTGCTAGGTGAGGGGAGAGAACAACTCCTCTCTGATATG GGTTTCAACTTGGTTGTGCACAATCACATAATAACAGCCACGGAAACAATGGAAGGAACA CGCAACATAACATTGGATGACTTGAAACGTGTTTGCGCTGATATGATAAAAAAGCCACTC ACATTCACTGTGTATGGCGACACGACGAAGATGCCATCACATGAGTCCTTGGAAGAAACC GTTCGCAAAACTTATGAGAAACTAAACTGA
  • Download Fasta

  • Fasta :-

    MLRHCIPRLGIAKTVIKDNYSLSTLTNGLRVLTCDDGNGVTGMGLFMLNGAKFESPDNAG AAAVFEALPLRDNQIYTSREISQALSGLGNAFKVTNNKEALSVILMLPRYHQRDGLELLN AMCLHPTRNEEEFRVAKEKTHERTLLYDRDATSVCFELVHEAGWNGKGLGHSLNPKKEEL DKLTLEKFTAFHSACTRPERTVLAATGVADHKSFAEEVEKLLRFNNADVAVQAMPQLQPG YYPYTGGSRLVHRTEAPESVNKFQEKSLSHVALFFQGVPINHPDYYNISVIQTLLGGGTS FSSGGPGKGMQTKLFREVLNREGFLHGLECITAWYSDGGLFGLYGTAPHQAVVSLLNVMI YQAASICQRVSPTHLEMAKNQLRSQLILLGEGREQLLSDMGFNLVVHNHIITATETMEGT RNITLDDLKRVCADMIKKPLTFTVYGDTTKMPSHESLEETVRKTYEKLN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg.972.2.2270456 SPSHESLEET0.996unspTbg.972.2.2270456 SPSHESLEET0.996unspTbg.972.2.2270456 SPSHESLEET0.996unspTbg.972.2.2270371 SCQRVSPTHL0.994unspTbg.972.2.2270453 STKMPSHESL0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India