Tbg972.1.1810 | amidohydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.1.1810OTHER0.9937240.0023340.003942
No Results

  • Fasta :-

    >Tbg972.1.1810 MTFISSLIQAVQPEVVQWRRHIHENPCLSHKEQQTADYVESILGSMPAKLDIRRLTPSSV VADLRGGAGDGPTYALRADMDALPLQEESGEPFSSKLPGVMHACGHDAHTAILLGAIKVL CHVKDKICGTIRFIFQHAEEVIPSGAKQLVQLGVLDGVKMIFGLAVDVSNPPGTVLCKSG VLTSACNDFDIVIQGASGHASQPELCIDPIVIGAQVVMSLQTIVSRRIGALTTPVLSIAT FQGGRGGYNVIPDTVHLRGTLRCLDSGVQKRVPVMVEEIVAGITSAHGAKHTVSWLEPNI VTYNNEAAYDVVKRVAEHVVSGITFVELPTAMTGVTDFGEYGAVIPGCLFLLGAGNETNN SVSNHNYSSRFRLNENVMVDGVRMFVGLMMTLAVPDAPSPGT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/383 Sequence name : 383 Sequence length : 402 VALUES OF COMPUTED PARAMETERS Coef20 : 4.508 CoefTot : -0.076 ChDiff : -9 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.594 0.242 0.664 MesoH : 0.180 0.811 -0.096 0.358 MuHd_075 : 12.435 11.048 4.387 1.246 MuHd_095 : 17.632 26.206 7.015 6.748 MuHd_100 : 15.100 21.814 5.069 6.201 MuHd_105 : 9.277 14.708 2.360 4.604 Hmax_075 : 13.300 12.250 1.875 3.617 Hmax_095 : 19.800 23.100 3.559 8.110 Hmax_100 : 19.500 22.200 3.268 7.550 Hmax_105 : 9.888 16.363 0.723 5.959 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8026 0.1974 DFMC : 0.8860 0.1140
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 402 Tbg972.1.1810 MTFISSLIQAVQPEVVQWRRHIHENPCLSHKEQQTADYVESILGSMPAKLDIRRLTPSSVVADLRGGAGDGPTYALRADM 80 DALPLQEESGEPFSSKLPGVMHACGHDAHTAILLGAIKVLCHVKDKICGTIRFIFQHAEEVIPSGAKQLVQLGVLDGVKM 160 IFGLAVDVSNPPGTVLCKSGVLTSACNDFDIVIQGASGHASQPELCIDPIVIGAQVVMSLQTIVSRRIGALTTPVLSIAT 240 FQGGRGGYNVIPDTVHLRGTLRCLDSGVQKRVPVMVEEIVAGITSAHGAKHTVSWLEPNIVTYNNEAAYDVVKRVAEHVV 320 SGITFVELPTAMTGVTDFGEYGAVIPGCLFLLGAGNETNNSVSNHNYSSRFRLNENVMVDGVRMFVGLMMTLAVPDAPSP 400 GT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.1.1810 19 PEVVQWR|RH 0.090 . Tbg972.1.1810 20 EVVQWRR|HI 0.145 . Tbg972.1.1810 31 NPCLSHK|EQ 0.066 . Tbg972.1.1810 49 LGSMPAK|LD 0.070 . Tbg972.1.1810 53 PAKLDIR|RL 0.072 . Tbg972.1.1810 54 AKLDIRR|LT 0.099 . Tbg972.1.1810 65 SVVADLR|GG 0.095 . Tbg972.1.1810 77 GPTYALR|AD 0.104 . Tbg972.1.1810 96 GEPFSSK|LP 0.069 . Tbg972.1.1810 118 ILLGAIK|VL 0.058 . Tbg972.1.1810 124 KVLCHVK|DK 0.067 . Tbg972.1.1810 126 LCHVKDK|IC 0.096 . Tbg972.1.1810 132 KICGTIR|FI 0.109 . Tbg972.1.1810 147 VIPSGAK|QL 0.058 . Tbg972.1.1810 159 GVLDGVK|MI 0.058 . Tbg972.1.1810 178 PGTVLCK|SG 0.058 . Tbg972.1.1810 226 LQTIVSR|RI 0.095 . Tbg972.1.1810 227 QTIVSRR|IG 0.105 . Tbg972.1.1810 245 ATFQGGR|GG 0.080 . Tbg972.1.1810 258 PDTVHLR|GT 0.099 . Tbg972.1.1810 262 HLRGTLR|CL 0.101 . Tbg972.1.1810 270 LDSGVQK|RV 0.078 . Tbg972.1.1810 271 DSGVQKR|VP 0.194 . Tbg972.1.1810 290 TSAHGAK|HT 0.075 . Tbg972.1.1810 313 AAYDVVK|RV 0.072 . Tbg972.1.1810 314 AYDVVKR|VA 0.272 . Tbg972.1.1810 370 NHNYSSR|FR 0.104 . Tbg972.1.1810 372 NYSSRFR|LN 0.106 . Tbg972.1.1810 383 VMVDGVR|MF 0.080 . ____________________________^_________________

  • Fasta :-

    >Tbg972.1.1810 ATGACGTTTATCAGCTCCCTAATACAGGCCGTGCAGCCAGAAGTGGTGCAATGGCGACGT CACATCCATGAAAATCCGTGCCTAAGCCATAAAGAGCAACAAACAGCAGATTATGTTGAA TCCATTCTGGGAAGCATGCCCGCAAAGCTTGACATCAGGCGGCTGACACCTAGTAGTGTC GTCGCTGACCTCCGCGGTGGGGCGGGTGATGGACCTACGTACGCACTGCGCGCTGACATG GACGCCCTTCCGCTGCAGGAAGAAAGTGGGGAGCCCTTCAGCTCAAAGCTACCGGGCGTG ATGCACGCGTGTGGTCATGACGCCCACACAGCCATTCTCCTTGGGGCTATCAAGGTCTTG TGTCATGTAAAAGACAAAATATGCGGCACTATTCGGTTTATCTTCCAGCATGCCGAGGAG GTTATTCCAAGTGGTGCAAAGCAACTTGTTCAGCTTGGTGTGCTGGACGGCGTTAAGATG ATATTTGGGCTTGCCGTTGACGTTTCCAACCCACCGGGAACAGTGCTATGTAAGAGCGGT GTTTTAACAAGCGCATGCAACGACTTTGACATCGTGATTCAGGGGGCTAGCGGACATGCC TCACAGCCAGAATTGTGTATTGACCCCATCGTAATAGGCGCACAGGTGGTAATGAGCCTC CAGACAATTGTGTCAAGACGTATAGGGGCACTTACAACACCTGTGCTAAGTATAGCAACC TTTCAAGGCGGCAGGGGAGGCTACAACGTCATTCCCGACACGGTGCATCTACGTGGCACG CTGCGTTGCCTGGATAGTGGGGTGCAGAAGCGGGTTCCGGTCATGGTGGAGGAAATCGTG GCAGGAATTACCAGTGCCCACGGCGCTAAACACACGGTGAGCTGGTTAGAGCCCAATATC GTAACATATAATAACGAAGCCGCATACGACGTTGTGAAGCGGGTTGCAGAACACGTCGTT TCCGGTATAACCTTTGTCGAGCTCCCAACGGCAATGACGGGAGTAACGGACTTTGGTGAG TATGGTGCTGTGATACCTGGATGTCTGTTTCTTCTTGGTGCAGGGAATGAAACTAACAAT TCAGTGAGCAATCATAACTACAGCTCTCGGTTTAGGCTGAATGAGAACGTCATGGTGGAT GGAGTGAGGATGTTCGTTGGGCTGATGATGACTCTTGCTGTTCCAGACGCTCCTAGTCCA GGAACGTAA
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  • Fasta :-

    MTFISSLIQAVQPEVVQWRRHIHENPCLSHKEQQTADYVESILGSMPAKLDIRRLTPSSV VADLRGGAGDGPTYALRADMDALPLQEESGEPFSSKLPGVMHACGHDAHTAILLGAIKVL CHVKDKICGTIRFIFQHAEEVIPSGAKQLVQLGVLDGVKMIFGLAVDVSNPPGTVLCKSG VLTSACNDFDIVIQGASGHASQPELCIDPIVIGAQVVMSLQTIVSRRIGALTTPVLSIAT FQGGRGGYNVIPDTVHLRGTLRCLDSGVQKRVPVMVEEIVAGITSAHGAKHTVSWLEPNI VTYNNEAAYDVVKRVAEHVVSGITFVELPTAMTGVTDFGEYGAVIPGCLFLLGAGNETNN SVSNHNYSSRFRLNENVMVDGVRMFVGLMMTLAVPDAPSPGT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.1.181029 SNPCLSHKEQ0.994unspTbg972.1.181056 TIRRLTPSSV0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India