Tbg972.10.11910 | Regulatory particle triple-A ATPase subunit 6

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.11910OTHER0.9999650.0000060.000029
No Results

  • Fasta :-

    >Tbg972.10.11910 MATKMVTPTATASDTDNPVSTYFLQKIQELRAQEKRLQDNYMRLEAQRNELNRRVRHLKE EVQLLQESGSIVADVVRVMSKGKVLVNVSSSQGKLVVDVEKTVNIDDLSRNVRVALRSGT FAIHYILPTKVDPLVSLMKVENAGSESTYDEIGGLSRQVKEIKEVIELSVKHPELFEALG IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAR EHSPSIIFMDEIDSIGSTRLENTGRGGDSEVQRTMLELLNQLDGFESTQSIKVIMATNRV DILDEALLRPGRIDRKIEFPAPDEPARFEILKIHSRKMNLTRGINLRTVAEKTNQCSGAE LKAVCTEAGMFALRERRVHITQEDFELAVAKIMHKDQDKSVSLKKMWK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/113 Sequence name : 113 Sequence length : 408 VALUES OF COMPUTED PARAMETERS Coef20 : 3.998 CoefTot : 0.169 ChDiff : 3 ZoneTo : 13 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.418 1.141 -0.069 0.475 MesoH : -0.729 0.387 -0.388 0.193 MuHd_075 : 14.329 14.867 4.340 3.603 MuHd_095 : 6.179 8.145 2.170 2.300 MuHd_100 : 10.018 10.526 2.975 2.611 MuHd_105 : 17.619 12.875 5.351 3.623 Hmax_075 : 15.633 9.800 1.276 3.383 Hmax_095 : 8.400 5.775 -0.580 2.284 Hmax_100 : 4.000 4.700 -1.018 1.850 Hmax_105 : 12.200 6.417 0.189 2.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7713 0.2287 DFMC : 0.7902 0.2098
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 408 Tbg972.10.11910 MATKMVTPTATASDTDNPVSTYFLQKIQELRAQEKRLQDNYMRLEAQRNELNRRVRHLKEEVQLLQESGSIVADVVRVMS 80 KGKVLVNVSSSQGKLVVDVEKTVNIDDLSRNVRVALRSGTFAIHYILPTKVDPLVSLMKVENAGSESTYDEIGGLSRQVK 160 EIKEVIELSVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAR 240 EHSPSIIFMDEIDSIGSTRLENTGRGGDSEVQRTMLELLNQLDGFESTQSIKVIMATNRVDILDEALLRPGRIDRKIEFP 320 APDEPARFEILKIHSRKMNLTRGINLRTVAEKTNQCSGAELKAVCTEAGMFALRERRVHITQEDFELAVAKIMHKDQDKS 400 VSLKKMWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.11910 4 ---MATK|MV 0.077 . Tbg972.10.11910 26 STYFLQK|IQ 0.059 . Tbg972.10.11910 31 QKIQELR|AQ 0.096 . Tbg972.10.11910 35 ELRAQEK|RL 0.067 . Tbg972.10.11910 36 LRAQEKR|LQ 0.211 . Tbg972.10.11910 43 LQDNYMR|LE 0.068 . Tbg972.10.11910 48 MRLEAQR|NE 0.070 . Tbg972.10.11910 53 QRNELNR|RV 0.138 . Tbg972.10.11910 54 RNELNRR|VR 0.113 . Tbg972.10.11910 56 ELNRRVR|HL 0.312 . Tbg972.10.11910 59 RRVRHLK|EE 0.148 . Tbg972.10.11910 77 IVADVVR|VM 0.103 . Tbg972.10.11910 81 VVRVMSK|GK 0.062 . Tbg972.10.11910 83 RVMSKGK|VL 0.062 . Tbg972.10.11910 94 VSSSQGK|LV 0.123 . Tbg972.10.11910 101 LVVDVEK|TV 0.068 . Tbg972.10.11910 110 NIDDLSR|NV 0.104 . Tbg972.10.11910 113 DLSRNVR|VA 0.280 . Tbg972.10.11910 117 NVRVALR|SG 0.111 . Tbg972.10.11910 130 HYILPTK|VD 0.055 . Tbg972.10.11910 139 PLVSLMK|VE 0.059 . Tbg972.10.11910 157 EIGGLSR|QV 0.103 . Tbg972.10.11910 160 GLSRQVK|EI 0.255 . Tbg972.10.11910 163 RQVKEIK|EV 0.070 . Tbg972.10.11910 171 VIELSVK|HP 0.057 . Tbg972.10.11910 185 LGIAQPK|GV 0.081 . Tbg972.10.11910 197 GPPGTGK|TL 0.059 . Tbg972.10.11910 202 GKTLLAR|AV 0.134 . Tbg972.10.11910 214 TDCTFIR|VS 0.150 . Tbg972.10.11910 223 GAELVQK|YI 0.092 . Tbg972.10.11910 230 YIGEGAR|LV 0.118 . Tbg972.10.11910 233 EGARLVR|EL 0.201 . Tbg972.10.11910 240 ELFVMAR|EH 0.100 . Tbg972.10.11910 259 DSIGSTR|LE 0.093 . Tbg972.10.11910 265 RLENTGR|GG 0.099 . Tbg972.10.11910 273 GDSEVQR|TM 0.113 . Tbg972.10.11910 292 ESTQSIK|VI 0.060 . Tbg972.10.11910 299 VIMATNR|VD 0.075 . Tbg972.10.11910 309 LDEALLR|PG 0.073 . Tbg972.10.11910 312 ALLRPGR|ID 0.208 . Tbg972.10.11910 315 RPGRIDR|KI 0.282 . Tbg972.10.11910 316 PGRIDRK|IE 0.078 . Tbg972.10.11910 327 APDEPAR|FE 0.106 . Tbg972.10.11910 332 ARFEILK|IH 0.072 . Tbg972.10.11910 336 ILKIHSR|KM 0.075 . Tbg972.10.11910 337 LKIHSRK|MN 0.095 . Tbg972.10.11910 342 RKMNLTR|GI 0.110 . Tbg972.10.11910 347 TRGINLR|TV 0.176 . Tbg972.10.11910 352 LRTVAEK|TN 0.068 . Tbg972.10.11910 362 CSGAELK|AV 0.095 . Tbg972.10.11910 374 AGMFALR|ER 0.083 . Tbg972.10.11910 376 MFALRER|RV 0.135 . Tbg972.10.11910 377 FALRERR|VH 0.389 . Tbg972.10.11910 391 FELAVAK|IM 0.068 . Tbg972.10.11910 395 VAKIMHK|DQ 0.070 . Tbg972.10.11910 399 MHKDQDK|SV 0.117 . Tbg972.10.11910 404 DKSVSLK|KM 0.076 . Tbg972.10.11910 405 KSVSLKK|MW 0.114 . Tbg972.10.11910 408 SLKKMWK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.11910 ATGGCAACCAAGATGGTGACACCTACGGCAACGGCTAGCGACACAGATAATCCTGTGAGC ACATACTTTCTGCAAAAGATTCAGGAGCTACGGGCTCAGGAAAAACGATTGCAGGATAAT TATATGCGGCTGGAGGCTCAACGAAATGAACTTAACAGGCGTGTACGACATCTGAAGGAA GAAGTGCAACTTCTGCAGGAAAGTGGATCTATAGTTGCCGATGTCGTGCGAGTGATGAGC AAAGGCAAAGTGTTGGTGAACGTCAGCTCCAGTCAAGGGAAGCTAGTCGTTGATGTGGAG AAAACCGTTAATATCGATGACCTCTCGCGCAATGTTCGCGTGGCGCTTCGAAGTGGCACG TTTGCAATTCACTACATTCTTCCCACCAAGGTGGATCCACTTGTTTCCCTTATGAAGGTT GAAAACGCTGGTAGCGAGTCAACTTACGATGAGATTGGCGGCCTCTCTCGCCAGGTGAAG GAGATCAAAGAAGTGATTGAGTTGTCCGTTAAGCATCCTGAGCTTTTTGAAGCGTTAGGT ATTGCCCAACCAAAGGGTGTGCTATTGTATGGGCCTCCAGGCACTGGAAAAACATTATTG GCTCGAGCAGTGGCACACCACACCGACTGCACCTTCATTCGTGTGAGTGGCGCTGAGTTG GTGCAAAAGTACATTGGGGAAGGTGCTAGGCTCGTTCGTGAATTGTTCGTTATGGCCCGC GAGCACAGCCCATCTATAATCTTTATGGATGAAATTGATTCTATCGGTTCAACCCGTTTG GAAAATACGGGTCGTGGAGGTGACAGCGAGGTGCAGCGCACCATGTTAGAGTTACTCAAT CAGCTCGATGGATTTGAGTCTACCCAGTCTATCAAGGTGATTATGGCCACGAACCGTGTG GATATACTAGACGAGGCGCTGCTTCGCCCGGGTCGAATTGACCGAAAGATTGAGTTTCCT GCACCCGACGAGCCGGCAAGGTTTGAGATTTTAAAGATTCATTCGAGGAAAATGAACCTG ACACGTGGGATCAATCTCAGGACCGTAGCCGAGAAAACAAACCAATGTTCTGGTGCGGAG CTAAAGGCAGTGTGTACAGAGGCAGGAATGTTTGCTCTCCGCGAGCGCCGTGTGCACATT ACTCAAGAAGACTTTGAACTTGCAGTCGCCAAAATCATGCATAAGGACCAAGACAAGAGC GTCTCACTCAAGAAGATGTGGAAATAG
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  • Fasta :-

    MATKMVTPTATASDTDNPVSTYFLQKIQELRAQEKRLQDNYMRLEAQRNELNRRVRHLKE EVQLLQESGSIVADVVRVMSKGKVLVNVSSSQGKLVVDVEKTVNIDDLSRNVRVALRSGT FAIHYILPTKVDPLVSLMKVENAGSESTYDEIGGLSRQVKEIKEVIELSVKHPELFEALG IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGAELVQKYIGEGARLVRELFVMAR EHSPSIIFMDEIDSIGSTRLENTGRGGDSEVQRTMLELLNQLDGFESTQSIKVIMATNRV DILDEALLRPGRIDRKIEFPAPDEPARFEILKIHSRKMNLTRGINLRTVAEKTNQCSGAE LKAVCTEAGMFALRERRVHITQEDFELAVAKIMHKDQDKSVSLKKMWK

  • title: ATP binding site
  • coordinates: P192,P193,G194,T195,G196,K197,T198,L199,D250,N298
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.11910216 SFIRVSGAEL0.992unspTbg972.10.11910243 SAREHSPSII0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India