Tbg972.10.11990 | mitochondrial intermediate peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.11990mTP0.0097930.0183860.971821CS pos: 33-34. CSA-VS. Pr: 0.2161
No Results

  • Fasta :-

    >Tbg972.10.11990 MLRRVTPFTLCASGFTACRWAGRVRHGATICSAVSDATAGKQKSACVTDVEEIPTLSFLS SKSILSETVDRTIEVCDALLNEIPKAKSIKEKHDLIDSTSNVLCLLLDPCEFVRQVHPDA EYKQHASFAFQKGYEYMSKVNSRRDLYDVVLQLDSTEGHKELSSEEIKNVAQLRRDMESN GIHLPDKLREKVTEMNIEKEELAMRFLTEQGSKNPFATLRYLLQCRYELSQLLGFESFAE QQLRGTMLENQQRVWHFLCGIAHKYRREAEKEMDIIRSNVGEVRNRQNITDDVRARVAHS LRRDAEPETAAEYFSVANCIRGIQCLCLEVFGVRLEEVQFDKDEIFNNDAKKYHVYDENK AFLGVIVLDLYASEMKYCQAGHLTLQLGCIPHQEALAKVGLKLPKRQYPVVVLTCNVGAC SPVQRLPNGRFDDESTLMHPNEVTTVFHEFGHAMHTIFGQTKVQNLAGTRASIDFVETFS QLFEQFLTSHEFLQLWAHRISTREPISFDMVMKRNAAADMFKHLDMMDQVVLSAVDQTLH GPQPYTVYFPRGDQGNLGKRTLGDIGDYGRGTYNLAKVLIDICTPLSIVTPTETGVLGTL SFEHLSGYPAGYYGYLYSLSIARRIWAKKFMKDPLNRDAGRELVQKVMRHGAACNPVDVI ENYLEDKLDEIDIWV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/503 Sequence name : 503 Sequence length : 675 VALUES OF COMPUTED PARAMETERS Coef20 : 5.072 CoefTot : 0.718 ChDiff : -12 ZoneTo : 35 KR : 5 DE : 0 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 1.459 0.175 0.481 MesoH : -0.351 0.386 -0.250 0.237 MuHd_075 : 26.612 12.939 5.729 5.723 MuHd_095 : 28.946 11.094 6.466 5.726 MuHd_100 : 23.886 15.496 8.106 5.838 MuHd_105 : 29.436 23.031 9.802 7.877 Hmax_075 : 15.983 16.917 3.980 4.188 Hmax_095 : 12.800 11.400 3.892 3.640 Hmax_100 : 13.200 9.500 4.478 4.550 Hmax_105 : 2.188 10.100 5.294 3.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1126 0.8874 DFMC : 0.0685 0.9315 This protein is probably imported in mitochondria. f(Ser) = 0.0857 f(Arg) = 0.1429 CMi = 0.31746 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 675 Tbg972.10.11990 MLRRVTPFTLCASGFTACRWAGRVRHGATICSAVSDATAGKQKSACVTDVEEIPTLSFLSSKSILSETVDRTIEVCDALL 80 NEIPKAKSIKEKHDLIDSTSNVLCLLLDPCEFVRQVHPDAEYKQHASFAFQKGYEYMSKVNSRRDLYDVVLQLDSTEGHK 160 ELSSEEIKNVAQLRRDMESNGIHLPDKLREKVTEMNIEKEELAMRFLTEQGSKNPFATLRYLLQCRYELSQLLGFESFAE 240 QQLRGTMLENQQRVWHFLCGIAHKYRREAEKEMDIIRSNVGEVRNRQNITDDVRARVAHSLRRDAEPETAAEYFSVANCI 320 RGIQCLCLEVFGVRLEEVQFDKDEIFNNDAKKYHVYDENKAFLGVIVLDLYASEMKYCQAGHLTLQLGCIPHQEALAKVG 400 LKLPKRQYPVVVLTCNVGACSPVQRLPNGRFDDESTLMHPNEVTTVFHEFGHAMHTIFGQTKVQNLAGTRASIDFVETFS 480 QLFEQFLTSHEFLQLWAHRISTREPISFDMVMKRNAAADMFKHLDMMDQVVLSAVDQTLHGPQPYTVYFPRGDQGNLGKR 560 TLGDIGDYGRGTYNLAKVLIDICTPLSIVTPTETGVLGTLSFEHLSGYPAGYYGYLYSLSIARRIWAKKFMKDPLNRDAG 640 RELVQKVMRHGAACNPVDVIENYLEDKLDEIDIWV 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.11990 3 ----MLR|RV 0.096 . Tbg972.10.11990 4 ---MLRR|VT 0.105 . Tbg972.10.11990 19 SGFTACR|WA 0.139 . Tbg972.10.11990 23 ACRWAGR|VR 0.090 . Tbg972.10.11990 25 RWAGRVR|HG 0.092 . Tbg972.10.11990 41 SDATAGK|QK 0.080 . Tbg972.10.11990 43 ATAGKQK|SA 0.103 . Tbg972.10.11990 62 LSFLSSK|SI 0.079 . Tbg972.10.11990 71 LSETVDR|TI 0.093 . Tbg972.10.11990 85 LLNEIPK|AK 0.085 . Tbg972.10.11990 87 NEIPKAK|SI 0.101 . Tbg972.10.11990 90 PKAKSIK|EK 0.088 . Tbg972.10.11990 92 AKSIKEK|HD 0.074 . Tbg972.10.11990 114 DPCEFVR|QV 0.129 . Tbg972.10.11990 123 HPDAEYK|QH 0.059 . Tbg972.10.11990 132 ASFAFQK|GY 0.070 . Tbg972.10.11990 139 GYEYMSK|VN 0.059 . Tbg972.10.11990 143 MSKVNSR|RD 0.075 . Tbg972.10.11990 144 SKVNSRR|DL 0.296 . Tbg972.10.11990 160 DSTEGHK|EL 0.061 . Tbg972.10.11990 168 LSSEEIK|NV 0.091 . Tbg972.10.11990 174 KNVAQLR|RD 0.092 . Tbg972.10.11990 175 NVAQLRR|DM 0.209 . Tbg972.10.11990 187 GIHLPDK|LR 0.071 . Tbg972.10.11990 189 HLPDKLR|EK 0.082 . Tbg972.10.11990 191 PDKLREK|VT 0.062 . Tbg972.10.11990 199 TEMNIEK|EE 0.058 . Tbg972.10.11990 205 KEELAMR|FL 0.096 . Tbg972.10.11990 213 LTEQGSK|NP 0.060 . Tbg972.10.11990 220 NPFATLR|YL 0.103 . Tbg972.10.11990 226 RYLLQCR|YE 0.079 . Tbg972.10.11990 244 FAEQQLR|GT 0.098 . Tbg972.10.11990 253 MLENQQR|VW 0.082 . Tbg972.10.11990 264 LCGIAHK|YR 0.077 . Tbg972.10.11990 266 GIAHKYR|RE 0.114 . Tbg972.10.11990 267 IAHKYRR|EA 0.355 . Tbg972.10.11990 271 YRREAEK|EM 0.083 . Tbg972.10.11990 277 KEMDIIR|SN 0.117 . Tbg972.10.11990 284 SNVGEVR|NR 0.083 . Tbg972.10.11990 286 VGEVRNR|QN 0.079 . Tbg972.10.11990 294 NITDDVR|AR 0.063 . Tbg972.10.11990 296 TDDVRAR|VA 0.128 . Tbg972.10.11990 302 RVAHSLR|RD 0.086 . Tbg972.10.11990 303 VAHSLRR|DA 0.326 . Tbg972.10.11990 321 SVANCIR|GI 0.093 . Tbg972.10.11990 334 LEVFGVR|LE 0.073 . Tbg972.10.11990 342 EEVQFDK|DE 0.062 . Tbg972.10.11990 351 IFNNDAK|KY 0.066 . Tbg972.10.11990 352 FNNDAKK|YH 0.104 . Tbg972.10.11990 360 HVYDENK|AF 0.062 . Tbg972.10.11990 376 LYASEMK|YC 0.070 . Tbg972.10.11990 398 HQEALAK|VG 0.059 . Tbg972.10.11990 402 LAKVGLK|LP 0.058 . Tbg972.10.11990 405 VGLKLPK|RQ 0.062 . Tbg972.10.11990 406 GLKLPKR|QY 0.158 . Tbg972.10.11990 425 ACSPVQR|LP 0.104 . Tbg972.10.11990 430 QRLPNGR|FD 0.120 . Tbg972.10.11990 462 TIFGQTK|VQ 0.062 . Tbg972.10.11990 470 QNLAGTR|AS 0.083 . Tbg972.10.11990 499 LQLWAHR|IS 0.086 . Tbg972.10.11990 503 AHRISTR|EP 0.087 . Tbg972.10.11990 513 SFDMVMK|RN 0.065 . Tbg972.10.11990 514 FDMVMKR|NA 0.210 . Tbg972.10.11990 522 AAADMFK|HL 0.074 . Tbg972.10.11990 551 YTVYFPR|GD 0.100 . Tbg972.10.11990 559 DQGNLGK|RT 0.061 . Tbg972.10.11990 560 QGNLGKR|TL 0.250 . Tbg972.10.11990 570 DIGDYGR|GT 0.082 . Tbg972.10.11990 577 GTYNLAK|VL 0.066 . Tbg972.10.11990 623 YSLSIAR|RI 0.091 . Tbg972.10.11990 624 SLSIARR|IW 0.214 . Tbg972.10.11990 628 ARRIWAK|KF 0.073 . Tbg972.10.11990 629 RRIWAKK|FM 0.128 . Tbg972.10.11990 632 WAKKFMK|DP 0.063 . Tbg972.10.11990 637 MKDPLNR|DA 0.199 . Tbg972.10.11990 641 LNRDAGR|EL 0.116 . Tbg972.10.11990 646 GRELVQK|VM 0.065 . Tbg972.10.11990 649 LVQKVMR|HG 0.094 . Tbg972.10.11990 667 ENYLEDK|LD 0.061 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.11990 ATGTTGCGGCGTGTCACCCCCTTCACACTGTGTGCTTCAGGCTTCACTGCCTGCCGTTGG GCCGGACGAGTGCGTCATGGTGCGACGATTTGTTCAGCTGTCAGTGATGCAACCGCTGGG AAGCAAAAAAGCGCTTGTGTCACAGACGTGGAGGAAATACCCACACTTTCTTTCCTTTCG TCAAAGTCCATATTGTCGGAGACAGTTGATCGAACCATTGAGGTGTGTGACGCACTTCTA AACGAAATTCCAAAGGCCAAGAGCATAAAAGAAAAACACGACCTTATTGACTCAACTAGT AACGTTCTATGTCTTCTTCTTGACCCCTGTGAGTTTGTGCGCCAGGTTCACCCTGATGCG GAGTACAAGCAGCATGCCTCGTTCGCATTTCAAAAGGGATATGAGTACATGAGTAAAGTC AACTCCCGAAGGGATTTGTACGATGTTGTCCTTCAGCTTGACAGCACTGAGGGACACAAG GAACTCAGCAGTGAAGAAATTAAAAACGTGGCCCAACTTAGGCGGGACATGGAAAGTAAC GGCATCCATCTCCCCGACAAACTACGTGAGAAGGTAACTGAAATGAACATTGAAAAGGAG GAACTCGCCATGCGCTTCCTGACGGAGCAGGGTTCGAAGAATCCCTTTGCAACACTCCGT TATCTTCTTCAGTGCCGTTACGAACTCTCGCAACTGCTGGGGTTTGAGAGCTTCGCAGAA CAACAACTTCGAGGGACAATGCTGGAAAATCAGCAGCGTGTTTGGCATTTCTTGTGTGGA ATTGCCCATAAGTACCGGAGAGAGGCCGAGAAGGAGATGGATATCATACGGAGCAACGTT GGAGAAGTACGTAATCGACAAAACATTACAGACGATGTCCGAGCTCGAGTGGCTCATTCA CTAAGACGTGATGCGGAGCCGGAAACGGCGGCTGAGTATTTCTCCGTTGCAAACTGCATA CGCGGTATTCAGTGCCTCTGTTTGGAGGTTTTTGGCGTGCGGTTGGAGGAAGTGCAGTTC GACAAAGATGAGATCTTCAACAACGACGCCAAAAAGTATCACGTGTATGACGAGAATAAG GCGTTTCTTGGAGTTATCGTACTCGATTTGTACGCGAGTGAAATGAAATATTGCCAAGCT GGCCACCTTACGTTGCAGCTTGGTTGTATACCCCACCAGGAGGCCTTGGCAAAGGTGGGG CTAAAGTTACCGAAACGCCAGTATCCCGTTGTTGTTTTAACGTGCAATGTTGGAGCCTGT TCGCCCGTGCAGCGACTCCCTAATGGTAGGTTTGACGATGAGTCTACGCTTATGCACCCC AATGAAGTGACAACAGTTTTTCACGAGTTTGGTCATGCGATGCACACCATTTTTGGCCAG ACGAAGGTACAGAACCTCGCTGGAACACGTGCTAGTATCGATTTTGTAGAGACATTCTCG CAGCTCTTTGAGCAATTCCTCACCTCCCATGAGTTTCTGCAGTTGTGGGCACACCGTATC AGCACGCGGGAACCCATCTCATTTGACATGGTCATGAAACGGAACGCAGCTGCTGACATG TTCAAGCACCTTGACATGATGGATCAAGTAGTTCTTTCGGCGGTAGATCAGACCCTTCAT GGTCCTCAGCCATACACTGTGTACTTTCCTCGTGGAGACCAGGGGAACCTTGGGAAACGT ACACTTGGAGATATCGGCGACTACGGACGCGGTACGTACAACTTAGCAAAGGTCCTTATC GACATATGTACTCCTCTGTCTATTGTGACACCGACGGAAACAGGTGTTTTGGGTACTCTT TCGTTTGAACACCTCTCCGGTTACCCGGCAGGTTACTACGGTTACCTTTACAGTCTTTCC ATTGCTCGTCGCATATGGGCGAAGAAGTTTATGAAGGACCCGCTTAACCGTGACGCAGGG AGGGAGCTGGTGCAAAAAGTAATGCGCCACGGGGCTGCATGTAACCCTGTTGATGTCATT GAGAACTATCTGGAGGACAAACTCGATGAAATCGACATATGGGTGTGA
  • Download Fasta

  • Fasta :-

    MLRRVTPFTLCASGFTACRWAGRVRHGATICSAVSDATAGKQKSACVTDVEEIPTLSFLS SKSILSETVDRTIEVCDALLNEIPKAKSIKEKHDLIDSTSNVLCLLLDPCEFVRQVHPDA EYKQHASFAFQKGYEYMSKVNSRRDLYDVVLQLDSTEGHKELSSEEIKNVAQLRRDMESN GIHLPDKLREKVTEMNIEKEELAMRFLTEQGSKNPFATLRYLLQCRYELSQLLGFESFAE QQLRGTMLENQQRVWHFLCGIAHKYRREAEKEMDIIRSNVGEVRNRQNITDDVRARVAHS LRRDAEPETAAEYFSVANCIRGIQCLCLEVFGVRLEEVQFDKDEIFNNDAKKYHVYDENK AFLGVIVLDLYASEMKYCQAGHLTLQLGCIPHQEALAKVGLKLPKRQYPVVVLTCNVGAC SPVQRLPNGRFDDESTLMHPNEVTTVFHEFGHAMHTIFGQTKVQNLAGTRASIDFVETFS QLFEQFLTSHEFLQLWAHRISTREPISFDMVMKRNAAADMFKHLDMMDQVVLSAVDQTLH GPQPYTVYFPRGDQGNLGKRTLGDIGDYGRGTYNLAKVLIDICTPLSIVTPTETGVLGTL SFEHLSGYPAGYYGYLYSLSIARRIWAKKFMKDPLNRDAGRELVQKVMRHGAACNPVDVI ENYLEDKLDEIDIWV

  • title: Zn binding site
  • coordinates: H448,H452,E477
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.11990163 SHKELSSEEI0.996unspTbg972.10.11990163 SHKELSSEEI0.996unspTbg972.10.11990163 SHKELSSEEI0.996unspTbg972.10.11990300 SRVAHSLRRD0.992unspTbg972.10.11990501 SAHRISTREP0.993unspTbg972.10.1199088 SPKAKSIKEK0.997unspTbg972.10.11990142 SSKVNSRRDL0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India