Tbg972.10.140 | proteasome subunit alpha type-5, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.140OTHER0.9997900.0001430.000068
No Results

  • Fasta :-

    >Tbg972.10.140 MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVD PSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLS VQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTV FSERYHRNMTVEEAENLTVQILRQVMEEKLTRTSVEIAIVPVSTGRLQIYDQEQIQRIID RQAEEN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/144 Sequence name : 144 Sequence length : 246 VALUES OF COMPUTED PARAMETERS Coef20 : 3.598 CoefTot : 0.111 ChDiff : -12 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.753 1.247 0.045 0.479 MesoH : -0.647 0.458 -0.369 0.234 MuHd_075 : 25.631 14.095 6.147 5.448 MuHd_095 : 20.774 12.058 5.858 4.361 MuHd_100 : 18.005 13.762 4.129 4.820 MuHd_105 : 14.686 14.097 2.859 5.168 Hmax_075 : 3.587 1.662 -1.445 2.249 Hmax_095 : 11.200 5.600 0.820 3.320 Hmax_100 : 2.400 2.900 -1.503 2.760 Hmax_105 : -5.300 3.000 -3.902 2.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8598 0.1402 DFMC : 0.8585 0.1415
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 246 Tbg972.10.140 MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSG 80 MVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSG 160 TYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQVMEEKLTRTSVEIAIVPVSTGRLQIYDQEQIQRIID 240 RQAEEN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.140 5 --MFSSK|TE 0.061 . Tbg972.10.140 10 SKTEYDR|GV 0.111 . Tbg972.10.140 20 TFSPEGR|IF 0.122 . Tbg972.10.140 32 YAIEAIK|LG 0.065 . Tbg972.10.140 52 VIIAAEK|RV 0.060 . Tbg972.10.140 53 IIAAEKR|VP 0.157 . Tbg972.10.140 66 DPSSVNK|IL 0.077 . Tbg972.10.140 86 GMVADAR|IL 0.089 . Tbg972.10.140 93 ILVDHAR|VE 0.088 . Tbg972.10.140 100 VEAQNHR|FT 0.123 . Tbg972.10.140 129 FGESGGR|KK 0.067 . Tbg972.10.140 130 GESGGRK|KL 0.090 . Tbg972.10.140 131 ESGGRKK|LM 0.100 . Tbg972.10.140 135 RKKLMSR|PF 0.105 . Tbg972.10.140 164 PSGTYTR|YD 0.121 . Tbg972.10.140 184 QTVFSER|YH 0.089 . Tbg972.10.140 187 FSERYHR|NM 0.219 . Tbg972.10.140 203 LTVQILR|QV 0.113 . Tbg972.10.140 209 RQVMEEK|LT 0.068 . Tbg972.10.140 212 MEEKLTR|TS 0.074 . Tbg972.10.140 226 VPVSTGR|LQ 0.080 . Tbg972.10.140 237 DQEQIQR|II 0.088 . Tbg972.10.140 241 IQRIIDR|QA 0.140 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.140 ATGTTCTCCTCCAAAACCGAGTATGACCGTGGCGTTAACACCTTTAGCCCAGAGGGTCGC ATTTTCCAAATTGAATACGCCATCGAGGCAATCAAGTTGGGAAGCACAAGCTTGGGAATT CAAACCCCCGATGCTGTTATCATTGCTGCCGAGAAGCGGGTGCCATCAACACTGGTTGAT CCGTCAAGTGTAAATAAGATCCTGGAAATCGATCATCATATCGGGACCGTTCTTAGTGGC ATGGTGGCGGATGCGAGAATACTTGTGGACCATGCGCGTGTGGAGGCACAAAATCACCGT TTCACCTATGATGAGCCGATGAGCGTTGAATCGTGTGCCTTGGCGACGTGCGACCTGTCA GTTCAGTTTGGTGAAAGCGGGGGACGGAAGAAACTCATGTCGAGGCCCTTCGGTGTCTCA TTATTGATTGCCGGTGTTGACGAAAACGGACCCCAGCTTTGGCAAACAGATCCCAGCGGC ACCTATACACGTTACGATGCTCAAGCAATCGGTGGTGGTGCCGAGGCTGCTCAAACTGTT TTCAGTGAGCGTTATCATCGGAACATGACAGTTGAGGAGGCAGAAAATCTCACCGTGCAG ATTTTACGGCAGGTGATGGAAGAGAAGCTAACGAGGACCAGCGTTGAAATTGCAATTGTT CCGGTTTCCACTGGGCGGCTTCAAATATATGACCAGGAACAGATACAGCGGATCATTGAT CGGCAGGCCGAGGAAAATTAA
  • Download Fasta

  • Fasta :-

    MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVD PSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLS VQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTV FSERYHRNMTVEEAENLTVQILRQVMEEKLTRTSVEIAIVPVSTGRLQIYDQEQIQRIID RQAEEN

  • title: active site
  • coordinates: S35,E51,R53,K66,G172
No Results
No Results
IDSitePeptideScoreMethod
Tbg972.10.140214 SLTRTSVEIA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India