Tbg972.10.2590 | mitochondrial processing peptidase alpha subunit (pseudogene), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.2590OTHER0.9719530.0003630.027684
No Results

  • Fasta :-

    >Tbg972.10.2590 MKYALQTSNMNSSLFQLDRTMRSTGNAYGHGEVRKRFLTWKAEGRRDMWERPFEMIATGV VAPRFHESDVERFRDTMDNQLKELRWQNPREYCTDAVETVAFFKEPLGSPRMVSTAANGR CDGKALLNH*ATHFHPRKVTIAAVNVQHDALLAAYEALPFPHSAEAPHHAASPASTLSHK GEAQQFHPGRHEVIYEDRAKVMGTLPDMNEDVIAAIAVPNYGCDEDVKKYALALITYEIY QVTVERTTPVGANPVKGVRAFYRPYASTGLIGCTLRGSPDEMDGLLHLAVESLPINVSEA DVNLGRTRTIASFKRPHLETMGDYCDFIGTSYFDQKGLIEEIGKVIVADLEVTLNATASV APAVYVIGSTFTFPKLRSLKMVKQSDYYNFIGRFGE*H
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/262 Sequence name : 262 Sequence length : 398 VALUES OF COMPUTED PARAMETERS Coef20 : 4.257 CoefTot : -1.000 ChDiff : -4 ZoneTo : 31 KR : 3 DE : 1 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.647 1.376 0.213 0.558 MesoH : -0.568 0.345 -0.342 0.230 MuHd_075 : 18.858 15.058 5.060 4.460 MuHd_095 : 35.564 15.584 8.725 6.087 MuHd_100 : 39.959 20.529 9.441 7.643 MuHd_105 : 39.971 22.835 9.562 8.325 Hmax_075 : 3.800 12.483 0.153 4.550 Hmax_095 : 15.200 9.500 1.476 3.730 Hmax_100 : 15.400 9.500 1.233 3.730 Hmax_105 : 17.267 11.667 1.577 3.943 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7013 0.2987 DFMC : 0.5518 0.4482
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 398 Tbg972.10.2590 MKYALQTSNMNSSLFQLDRTMRSTGNAYGHGEVRKRFLTWKAEGRRDMWERPFEMIATGVVAPRFHESDVERFRDTMDNQ 80 LKELRWQNPREYCTDAVETVAFFKEPLGSPRMVSTAANGRCDGKALLNHXATHFHPRKVTIAAVNVQHDALLAAYEALPF 160 PHSAEAPHHAASPASTLSHKGEAQQFHPGRHEVIYEDRAKVMGTLPDMNEDVIAAIAVPNYGCDEDVKKYALALITYEIY 240 QVTVERTTPVGANPVKGVRAFYRPYASTGLIGCTLRGSPDEMDGLLHLAVESLPINVSEADVNLGRTRTIASFKRPHLET 320 MGDYCDFIGTSYFDQKGLIEEIGKVIVADLEVTLNATASVAPAVYVIGSTFTFPKLRSLKMVKQSDYYNFIGRFGEXH 400 .....................P.......................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.2590 2 -----MK|YA 0.074 . Tbg972.10.2590 19 SLFQLDR|TM 0.083 . Tbg972.10.2590 22 QLDRTMR|ST 0.523 *ProP* Tbg972.10.2590 34 YGHGEVR|KR 0.072 . Tbg972.10.2590 35 GHGEVRK|RF 0.077 . Tbg972.10.2590 36 HGEVRKR|FL 0.230 . Tbg972.10.2590 41 KRFLTWK|AE 0.077 . Tbg972.10.2590 45 TWKAEGR|RD 0.092 . Tbg972.10.2590 46 WKAEGRR|DM 0.146 . Tbg972.10.2590 51 RRDMWER|PF 0.136 . Tbg972.10.2590 64 TGVVAPR|FH 0.102 . Tbg972.10.2590 72 HESDVER|FR 0.147 . Tbg972.10.2590 74 SDVERFR|DT 0.135 . Tbg972.10.2590 82 TMDNQLK|EL 0.068 . Tbg972.10.2590 85 NQLKELR|WQ 0.081 . Tbg972.10.2590 90 LRWQNPR|EY 0.091 . Tbg972.10.2590 104 ETVAFFK|EP 0.060 . Tbg972.10.2590 111 EPLGSPR|MV 0.174 . Tbg972.10.2590 120 STAANGR|CD 0.122 . Tbg972.10.2590 124 NGRCDGK|AL 0.067 . Tbg972.10.2590 137 ATHFHPR|KV 0.179 . Tbg972.10.2590 138 THFHPRK|VT 0.101 . Tbg972.10.2590 180 ASTLSHK|GE 0.069 . Tbg972.10.2590 190 QQFHPGR|HE 0.105 . Tbg972.10.2590 198 EVIYEDR|AK 0.074 . Tbg972.10.2590 200 IYEDRAK|VM 0.071 . Tbg972.10.2590 228 GCDEDVK|KY 0.059 . Tbg972.10.2590 229 CDEDVKK|YA 0.125 . Tbg972.10.2590 246 YQVTVER|TT 0.084 . Tbg972.10.2590 256 VGANPVK|GV 0.083 . Tbg972.10.2590 259 NPVKGVR|AF 0.076 . Tbg972.10.2590 263 GVRAFYR|PY 0.101 . Tbg972.10.2590 276 LIGCTLR|GS 0.098 . Tbg972.10.2590 306 ADVNLGR|TR 0.070 . Tbg972.10.2590 308 VNLGRTR|TI 0.075 . Tbg972.10.2590 314 RTIASFK|RP 0.061 . Tbg972.10.2590 315 TIASFKR|PH 0.155 . Tbg972.10.2590 336 TSYFDQK|GL 0.083 . Tbg972.10.2590 344 LIEEIGK|VI 0.061 . Tbg972.10.2590 375 STFTFPK|LR 0.062 . Tbg972.10.2590 377 FTFPKLR|SL 0.126 . Tbg972.10.2590 380 PKLRSLK|MV 0.192 . Tbg972.10.2590 383 RSLKMVK|QS 0.064 . Tbg972.10.2590 393 YYNFIGR|FG 0.108 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.2590 ATGAAGTATGCGCTGCAAACATCAAACATGAATAGTTCCCTCTTCCAGTTGGACCGCACA ATGCGTTCCACGGGTAATGCTTATGGACATGGTGAGGTTCGTAAGCGATTCCTCACCTGG AAGGCGGAGGGCCGACGTGACATGTGGGAACGGCCATTTGAGATGATCGCTACTGGGGTG GTGGCCCCACGTTTTCACGAAAGCGATGTGGAGAGGTTCCGTGATACCATGGACAATCAA CTTAAGGAACTCCGTTGGCAGAACCCACGAGAGTACTGCACCGACGCCGTTGAAACGGTT GCCTTCTTCAAGGAACCACTTGGTTCTCCGCGCATGGTATCGACAGCGGCCAACGGGCGC TGCGACGGGAAGGCGCTTTTGAATCACTAGGCAACCCATTTTCATCCCAGAAAAGTGACT ATCGCCGCAGTAAACGTACAACACGACGCGCTACTAGCGGCGTATGAGGCGCTTCCGTTT CCCCACAGTGCCGAAGCTCCGCACCATGCGGCGAGCCCTGCATCAACCCTTTCCCATAAA GGCGAAGCCCAACAGTTCCACCCCGGTCGCCATGAAGTGATCTATGAGGACCGTGCCAAA GTTATGGGAACTCTACCGGATATGAACGAGGACGTGATCGCGGCTATAGCGGTACCAAAT TATGGTTGCGACGAGGATGTAAAAAAGTATGCGTTAGCACTGATAACGTACGAAATTTAT CAAGTCACTGTTGAACGGACAACGCCAGTCGGTGCAAATCCGGTGAAGGGCGTGAGGGCG TTCTACCGTCCGTATGCGTCTACCGGTCTTATTGGGTGTACGCTTCGTGGCTCACCTGAT GAGATGGACGGTCTCCTACACCTAGCGGTTGAGAGTCTTCCAATTAATGTGTCAGAGGCT GACGTAAACTTAGGTCGCACCCGCACAATAGCTTCCTTCAAGCGCCCCCACTTGGAGACG ATGGGTGATTACTGTGACTTTATCGGTACGTCATACTTTGATCAAAAGGGACTCATTGAA GAAATTGGAAAAGTAATAGTGGCGGATTTAGAGGTGACGCTGAACGCAACTGCCTCAGTT GCGCCCGCTGTGTACGTGATCGGCTCAACCTTTACATTTCCGAAACTGCGCAGCCTCAAA ATGGTAAAGCAGTCTGACTATTATAACTTTATTGGACGATTTGGCGAGTGACATTAA
  • Download Fasta

  • Fasta :-

    MKYALQTSNMNSSLFQLDRTMRSTGNAYGHGEVRKRFLTWKAEGRRDMWERPFEMIATGV VAPRFHESDVERFRDTMDNQLKELRWQNPREYCTDAVETVAFFKEPLGSPRMVSTAANGR CDGKALLNH*ATHFHPRKVTIAAVNVQHDALLAAYEALPFPHSAEAPHHAASPASTLSHK GEAQQFHPGRHEVIYEDRAKVMGTLPDMNEDVIAAIAVPNYGCDEDVKKYALALITYEIY QVTVERTTPVGANPVKGVRAFYRPYASTGLIGCTLRGSPDEMDGLLHLAVESLPINVSEA DVNLGRTRTIASFKRPHLETMGDYCDFIGTSYFDQKGLIEEIGKVIVADLEVTLNATASV APAVYVIGSTFTFPKLRSLKMVKQSDYYNFIGRFGE*H

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.2590248 TVERTTPVGA0.992unspTbg972.10.2590278 STLRGSPDEM0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India