Tbg972.10.7380 | proteasome subunit alpha type-1, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.7380OTHER0.9998410.0000480.000111
No Results

  • Fasta :-

    >Tbg972.10.7380 MFKNQYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKRNPVSGLSSY QEKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRH IQFAGKRPFGVGLLIAGYDRQGPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGF PACDLDELVMHALRALGAATSGGVELNIKNTTIAIVGKGTPFTILTEEEARKYLDGFKTR PEDIPAVADNEEDDDELHEQPPDVEE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/25 Sequence name : 25 Sequence length : 266 VALUES OF COMPUTED PARAMETERS Coef20 : 3.805 CoefTot : -0.559 ChDiff : -9 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.835 1.212 -0.009 0.451 MesoH : -0.781 0.199 -0.408 0.145 MuHd_075 : 29.536 12.635 7.558 5.299 MuHd_095 : 22.903 8.249 3.932 4.963 MuHd_100 : 22.894 9.167 4.312 5.293 MuHd_105 : 11.930 5.571 2.410 3.492 Hmax_075 : 1.575 -2.275 -1.938 1.339 Hmax_095 : 3.200 -4.375 -2.635 1.391 Hmax_100 : -0.900 -4.400 -3.143 1.750 Hmax_105 : -2.217 -5.017 -3.853 1.482 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9454 0.0546 DFMC : 0.9148 0.0852
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 266 Tbg972.10.7380 MFKNQYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKRNPVSGLSSYQEKAFKLDEHVGMAISGLVA 80 DGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQGPRLYQTVPSGDVFDFKAT 160 AMGLRSQAARTYLERHFRGFPACDLDELVMHALRALGAATSGGVELNIKNTTIAIVGKGTPFTILTEEEARKYLDGFKTR 240 PEDIPAVADNEEDDDELHEQPPDVEE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.7380 3 ----MFK|NQ 0.062 . Tbg972.10.7380 18 TWSPTGR|LF 0.111 . Tbg972.10.7380 39 SAAVGVK|GA 0.094 . Tbg972.10.7380 50 VVLTALK|RN 0.053 . Tbg972.10.7380 51 VLTALKR|NP 0.112 . Tbg972.10.7380 63 LSSYQEK|AF 0.078 . Tbg972.10.7380 66 YQEKAFK|LD 0.070 . Tbg972.10.7380 83 GLVADGR|AL 0.139 . Tbg972.10.7380 87 DGRALSR|FL 0.097 . Tbg972.10.7380 90 ALSRFLR|TE 0.263 . Tbg972.10.7380 97 TECMNYR|YM 0.108 . Tbg972.10.7380 116 ADIVGAK|HQ 0.069 . Tbg972.10.7380 119 VGAKHQR|HI 0.110 . Tbg972.10.7380 126 HIQFAGK|RP 0.064 . Tbg972.10.7380 127 IQFAGKR|PF 0.207 . Tbg972.10.7380 140 LIAGYDR|QG 0.072 . Tbg972.10.7380 144 YDRQGPR|LY 0.089 . Tbg972.10.7380 158 GDVFDFK|AT 0.086 . Tbg972.10.7380 165 ATAMGLR|SQ 0.095 . Tbg972.10.7380 170 LRSQAAR|TY 0.110 . Tbg972.10.7380 175 ARTYLER|HF 0.086 . Tbg972.10.7380 178 YLERHFR|GF 0.264 . Tbg972.10.7380 194 LVMHALR|AL 0.120 . Tbg972.10.7380 209 GVELNIK|NT 0.064 . Tbg972.10.7380 218 TIAIVGK|GT 0.076 . Tbg972.10.7380 231 LTEEEAR|KY 0.096 . Tbg972.10.7380 232 TEEEARK|YL 0.091 . Tbg972.10.7380 238 KYLDGFK|TR 0.053 . Tbg972.10.7380 240 LDGFKTR|PE 0.088 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.7380 ATGTTTAAAAACCAGTACGACACGGATACCACCACGTGGAGCCCCACCGGGAGGTTGTTT CAAGTGGAATACGCAAATGAGGCGGTGAACAATGGCTCCGCTGCGGTTGGAGTTAAGGGC GCCGATTATGTCGTACTCACGGCCTTGAAACGCAATCCCGTGTCAGGGCTATCATCCTAT CAAGAGAAGGCATTCAAATTGGATGAGCACGTTGGTATGGCAATCAGTGGCCTCGTGGCA GACGGCCGTGCGCTCTCTCGTTTTCTACGTACAGAATGTATGAATTATCGCTACATGCAC GATAGCGACGCTCCACTTGTTATGCTTGCTGACATAGTGGGCGCGAAGCACCAGCGCCAC ATTCAATTTGCGGGTAAGCGTCCCTTTGGTGTCGGTCTCTTAATTGCCGGTTATGATCGC CAGGGGCCACGCCTTTACCAAACGGTGCCCTCAGGTGATGTGTTTGATTTTAAGGCAACC GCGATGGGGTTGCGTTCTCAGGCAGCACGTACCTACTTGGAGAGGCACTTTAGAGGGTTT CCCGCGTGTGATTTGGACGAGTTGGTTATGCATGCGTTGAGGGCTCTTGGCGCGGCGACC TCTGGTGGTGTAGAACTGAACATTAAAAACACCACCATTGCCATTGTAGGAAAGGGCACC CCCTTTACTATTCTCACGGAAGAAGAGGCGCGCAAGTATCTGGATGGGTTTAAGACGCGC CCAGAAGACATCCCCGCCGTTGCCGACAACGAAGAGGATGATGATGAATTACACGAGCAA CCCCCTGACGTTGAGGAGTGA
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  • Fasta :-

    MFKNQYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKRNPVSGLSSY QEKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRH IQFAGKRPFGVGLLIAGYDRQGPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGF PACDLDELVMHALRALGAATSGGVELNIKNTTIAIVGKGTPFTILTEEEARKYLDGFKTR PEDIPAVADNEEDDDELHEQPPDVEE

  • title: active site
  • coordinates: S33,L49,R51,K63,L164
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India