Tbg972.10.7450 | proteasome subunit beta type-5, putative

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.7450OTHER0.9951210.0039690.000911
No Results

  • Fasta :-

    >Tbg972.10.7450 MLADFESVLRSEFSLKDCPRIGPFTWHNIPGVNDAAEDGSALGLNNPLGVSADRTDDFSV MPYSGEELTRDPLCTSNCINSDRRIWKLMLPCPVPRSVPKLDMKKGTTTLGFHFDGGIII AVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRI SVAAASKILANITYQYRNHGLSMGTMVAGWDQFGPSLYYVDDKGTRVKHEIFSVGSGSIY AYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHPKGWTQISRDDQTK LYDRYSSQSA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/809 Sequence name : 809 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 4.151 CoefTot : 0.263 ChDiff : -3 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.088 0.075 0.582 MesoH : -0.462 0.238 -0.336 0.197 MuHd_075 : 16.871 12.336 6.974 3.794 MuHd_095 : 5.703 3.809 3.619 2.553 MuHd_100 : 18.182 11.863 5.005 4.601 MuHd_105 : 28.387 19.173 7.687 6.488 Hmax_075 : 4.200 10.800 1.422 3.230 Hmax_095 : 1.000 7.200 0.876 1.850 Hmax_100 : 2.800 9.100 0.745 3.000 Hmax_105 : 9.900 16.800 0.711 5.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9271 0.0729 DFMC : 0.8888 0.1112
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 Tbg972.10.7450 MLADFESVLRSEFSLKDCPRIGPFTWHNIPGVNDAAEDGSALGLNNPLGVSADRTDDFSVMPYSGEELTRDPLCTSNCIN 80 SDRRIWKLMLPCPVPRSVPKLDMKKGTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQY 160 WERVLGMECRLWELRNNCRISVAAASKILANITYQYRNHGLSMGTMVAGWDQFGPSLYYVDDKGTRVKHEIFSVGSGSIY 240 AYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHPKGWTQISRDDQTKLYDRYSSQSA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.7450 10 DFESVLR|SE 0.082 . Tbg972.10.7450 16 RSEFSLK|DC 0.080 . Tbg972.10.7450 20 SLKDCPR|IG 0.080 . Tbg972.10.7450 54 LGVSADR|TD 0.074 . Tbg972.10.7450 70 SGEELTR|DP 0.083 . Tbg972.10.7450 83 NCINSDR|RI 0.086 . Tbg972.10.7450 84 CINSDRR|IW 0.128 . Tbg972.10.7450 87 SDRRIWK|LM 0.114 . Tbg972.10.7450 96 LPCPVPR|SV 0.231 . Tbg972.10.7450 100 VPRSVPK|LD 0.082 . Tbg972.10.7450 104 VPKLDMK|KG 0.063 . Tbg972.10.7450 105 PKLDMKK|GT 0.112 . Tbg972.10.7450 125 IIAVDSR|AS 0.114 . Tbg972.10.7450 139 SSQTVMK|VL 0.080 . Tbg972.10.7450 163 DCQYWER|VL 0.092 . Tbg972.10.7450 170 VLGMECR|LW 0.084 . Tbg972.10.7450 175 CRLWELR|NN 0.077 . Tbg972.10.7450 179 ELRNNCR|IS 0.081 . Tbg972.10.7450 187 SVAAASK|IL 0.065 . Tbg972.10.7450 197 NITYQYR|NH 0.089 . Tbg972.10.7450 223 LYYVDDK|GT 0.071 . Tbg972.10.7450 226 VDDKGTR|VK 0.077 . Tbg972.10.7450 228 DKGTRVK|HE 0.065 . Tbg972.10.7450 250 VLDQGYR|KN 0.075 . Tbg972.10.7450 251 LDQGYRK|NL 0.086 . Tbg972.10.7450 263 EACDLAR|RS 0.072 . Tbg972.10.7450 264 ACDLARR|SI 0.178 . Tbg972.10.7450 272 IFHATYR|DG 0.114 . Tbg972.10.7450 288 VYHVHPK|GW 0.088 . Tbg972.10.7450 295 GWTQISR|DD 0.107 . Tbg972.10.7450 300 SRDDQTK|LY 0.072 . Tbg972.10.7450 304 QTKLYDR|YS 0.097 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.7450 ATGTTGGCAGATTTTGAAAGTGTTCTCCGCTCGGAGTTCTCCCTGAAGGATTGCCCTCGC ATCGGTCCTTTCACTTGGCATAACATTCCCGGTGTAAACGATGCAGCTGAAGATGGATCT GCTCTAGGTTTGAATAATCCCCTTGGAGTGAGTGCTGATCGCACGGACGATTTCAGCGTG ATGCCCTACAGTGGAGAAGAACTTACGAGGGATCCGCTTTGCACAAGCAACTGCATCAAC TCTGACAGACGCATATGGAAACTCATGTTACCGTGTCCAGTGCCGCGCAGTGTTCCTAAA CTTGACATGAAAAAAGGCACCACAACACTGGGGTTTCACTTTGACGGTGGGATAATTATT GCCGTTGACTCCCGTGCCTCATCCGGCCAGTATATTTCTTCTCAAACGGTTATGAAGGTA CTGGAGATAAACGAATATCTTCTTGGTACGATGGCTGGTGGTGCAGCAGATTGCCAGTAC TGGGAGCGCGTTCTCGGCATGGAGTGCCGCCTGTGGGAGCTACGTAACAACTGTCGTATC TCTGTAGCAGCCGCAAGCAAGATTCTGGCAAATATAACCTACCAATACCGCAACCACGGG CTATCTATGGGAACAATGGTGGCTGGTTGGGATCAGTTTGGGCCGTCCCTTTATTACGTG GACGACAAGGGCACGCGTGTAAAGCATGAAATTTTTAGTGTGGGATCCGGTTCCATTTAT GCCTATGGTGTGCTTGACCAGGGCTACCGGAAGAACCTCACTGTTGAGGAGGCATGTGAC CTGGCGCGCCGCTCAATCTTCCACGCGACGTATCGTGACGGTGCCTCTGGTGGCATTGTG ACTGTTTATCATGTTCACCCGAAAGGATGGACTCAGATATCGCGGGATGACCAAACCAAA CTGTATGACCGTTATTCTTCTCAGAGTGCATAG
  • Download Fasta

  • Fasta :-

    MLADFESVLRSEFSLKDCPRIGPFTWHNIPGVNDAAEDGSALGLNNPLGVSADRTDDFSV MPYSGEELTRDPLCTSNCINSDRRIWKLMLPCPVPRSVPKLDMKKGTTTLGFHFDGGIII AVDSRASSGQYISSQTVMKVLEINEYLLGTMAGGAADCQYWERVLGMECRLWELRNNCRI SVAAASKILANITYQYRNHGLSMGTMVAGWDQFGPSLYYVDDKGTRVKHEIFSVGSGSIY AYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTVYHVHPKGWTQISRDDQTK LYDRYSSQSA

  • title: active site
  • coordinates: T107,D123,R125,K139,S236,D273,S276,G277
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
Tbg972.10.745014 SRSEFSLKDC0.993unspTbg972.10.745064 SVMPYSGEEL0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India