Tbg972.10.7490 | Peptidase M76 family, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
Tbg972.10.7490OTHER0.9998830.0001060.000011
No Results

  • Fasta :-

    >Tbg972.10.7490 MASVEPDGVGNLSRKQPSIHEICEAAVDEVLANVNTVQYLIKSIEEISNTPFRRERIKCV PQLDSGGVANASWAGGSNTMADGTSAAGYMWRRARRDCEKGDILLIEQHVVLDKATENDS IVPGAKTCTAVERNLRHELIHAFDDARGIIEASDCMHQACSEVRAARLSGDCFVGEEMRR GRFDLLSGGIQCVRRRAITAVEKNPLCRGFSERAVERIFKQCYSDYEPFAAPLYSMGSYG DEKFEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/180 Sequence name : 180 Sequence length : 246 VALUES OF COMPUTED PARAMETERS Coef20 : 3.225 CoefTot : 0.253 ChDiff : -6 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.688 0.871 -0.148 0.354 MesoH : -1.086 -0.055 -0.496 0.077 MuHd_075 : 19.636 11.618 6.897 3.176 MuHd_095 : 22.549 14.831 5.124 5.429 MuHd_100 : 20.078 12.940 4.622 4.744 MuHd_105 : 17.597 9.993 4.436 3.634 Hmax_075 : 8.000 4.000 0.794 2.260 Hmax_095 : 0.612 6.700 -1.762 2.830 Hmax_100 : 6.000 4.300 0.008 2.350 Hmax_105 : 3.850 4.550 -0.902 2.228 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9602 0.0398 DFMC : 0.9201 0.0799
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 246 Tbg972.10.7490 MASVEPDGVGNLSRKQPSIHEICEAAVDEVLANVNTVQYLIKSIEEISNTPFRRERIKCVPQLDSGGVANASWAGGSNTM 80 ADGTSAAGYMWRRARRDCEKGDILLIEQHVVLDKATENDSIVPGAKTCTAVERNLRHELIHAFDDARGIIEASDCMHQAC 160 SEVRAARLSGDCFVGEEMRRGRFDLLSGGIQCVRRRAITAVEKNPLCRGFSERAVERIFKQCYSDYEPFAAPLYSMGSYG 240 DEKFEL 320 ................................................................................ 80 ...............P................................................................ 160 ................................................................................ 240 ...... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ Tbg972.10.7490 14 GVGNLSR|KQ 0.079 . Tbg972.10.7490 15 VGNLSRK|QP 0.102 . Tbg972.10.7490 42 TVQYLIK|SI 0.113 . Tbg972.10.7490 53 ISNTPFR|RE 0.084 . Tbg972.10.7490 54 SNTPFRR|ER 0.173 . Tbg972.10.7490 56 TPFRRER|IK 0.240 . Tbg972.10.7490 58 FRRERIK|CV 0.092 . Tbg972.10.7490 92 AAGYMWR|RA 0.085 . Tbg972.10.7490 93 AGYMWRR|AR 0.142 . Tbg972.10.7490 95 YMWRRAR|RD 0.295 . Tbg972.10.7490 96 MWRRARR|DC 0.755 *ProP* Tbg972.10.7490 100 ARRDCEK|GD 0.071 . Tbg972.10.7490 114 QHVVLDK|AT 0.062 . Tbg972.10.7490 126 SIVPGAK|TC 0.073 . Tbg972.10.7490 133 TCTAVER|NL 0.110 . Tbg972.10.7490 136 AVERNLR|HE 0.125 . Tbg972.10.7490 147 HAFDDAR|GI 0.107 . Tbg972.10.7490 164 QACSEVR|AA 0.111 . Tbg972.10.7490 167 SEVRAAR|LS 0.398 . Tbg972.10.7490 179 FVGEEMR|RG 0.068 . Tbg972.10.7490 180 VGEEMRR|GR 0.119 . Tbg972.10.7490 182 EEMRRGR|FD 0.244 . Tbg972.10.7490 194 GGIQCVR|RR 0.062 . Tbg972.10.7490 195 GIQCVRR|RA 0.180 . Tbg972.10.7490 196 IQCVRRR|AI 0.273 . Tbg972.10.7490 203 AITAVEK|NP 0.054 . Tbg972.10.7490 208 EKNPLCR|GF 0.103 . Tbg972.10.7490 213 CRGFSER|AV 0.280 . Tbg972.10.7490 217 SERAVER|IF 0.099 . Tbg972.10.7490 220 AVERIFK|QC 0.096 . Tbg972.10.7490 243 GSYGDEK|FE 0.061 . ____________________________^_________________

  • Fasta :-

    >Tbg972.10.7490 ATGGCCTCTGTGGAACCTGATGGTGTAGGGAACTTAAGCAGAAAGCAGCCCTCCATCCAC GAAATATGTGAGGCTGCTGTAGATGAGGTCCTTGCAAATGTTAATACCGTGCAGTATCTG ATCAAAAGCATAGAAGAAATTAGCAACACCCCATTCCGTCGTGAGCGAATAAAGTGCGTT CCCCAACTCGACAGCGGCGGTGTTGCCAATGCATCTTGGGCTGGTGGCAGCAACACCATG GCAGATGGCACCTCAGCGGCAGGGTACATGTGGCGTCGGGCACGCAGGGATTGCGAAAAG GGGGACATTTTACTTATCGAGCAACATGTTGTGCTGGATAAGGCAACTGAGAACGACAGC ATTGTACCCGGGGCGAAAACTTGCACTGCAGTTGAGCGGAATCTCAGACACGAGCTGATC CATGCCTTTGACGACGCGCGAGGCATTATTGAAGCCTCGGATTGTATGCACCAGGCATGC AGTGAAGTACGCGCTGCCAGGCTGAGTGGTGACTGTTTTGTCGGGGAGGAGATGCGTCGC GGGCGGTTTGATCTCCTGAGTGGTGGTATACAGTGTGTTCGTCGTCGTGCTATTACAGCT GTGGAAAAAAACCCATTATGCCGTGGTTTCTCGGAGCGCGCCGTAGAGCGCATCTTCAAA CAGTGTTACTCAGACTACGAGCCATTTGCCGCACCCTTGTATTCCATGGGGAGTTACGGT GACGAGAAGTTCGAGTTGTAG
  • Download Fasta

  • Fasta :-

    MASVEPDGVGNLSRKQPSIHEICEAAVDEVLANVNTVQYLIKSIEEISNTPFRRERIKCV PQLDSGGVANASWAGGSNTMADGTSAAGYMWRRARRDCEKGDILLIEQHVVLDKATENDS IVPGAKTCTAVERNLRHELIHAFDDARGIIEASDCMHQACSEVRAARLSGDCFVGEEMRR GRFDLLSGGIQCVRRRAITAVEKNPLCRGFSERAVERIFKQCYSDYEPFAAPLYSMGSYG DEKFEL

    No Results
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IDSitePeptideScoreMethod
Tbg972.10.749018 SRKQPSIHEI0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India